Planaria EST Database


DrC_01805

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01805
         (238 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9NI63|PMYT1_DROME  Membrane-associated tyrosine-and thre...    33   0.27 
sp|P47810|WEE1_MOUSE  Wee1-like protein kinase                     32   0.46 
sp|Q10407|MKH1_SCHPO  MAP kinase kinase kinase mkh1                32   0.46 
sp|Q63802|WEE1_RAT  Wee1-like protein kinase                       30   1.7  
sp|P54936|LIN2_CAEEL  Abnormal cell lineage protein 2 (Prote...    30   2.3  
sp|P30291|WEE1_HUMAN  Wee1-like protein kinase (WEE1hu)            30   2.3  
sp|Q8VCR8|MYLK2_MOUSE  Myosin light chain kinase 2, skeletal...    29   3.9  
sp|Q9DBQ7|PACE1_MOUSE  Protein-associating with the carboxyl...    28   5.1  
sp|P20689|MYLK2_RAT  Myosin light chain kinase 2, skeletal/c...    28   6.6  
sp|O14733|MP2K7_HUMAN  Dual specificity mitogen-activated pr...    28   6.6  
>sp|Q9NI63|PMYT1_DROME Membrane-associated tyrosine-and threonine-specific cdc2-inhibitory
           kinase (Myt1 kinase) (dMyt1)
          Length = 533

 Score = 32.7 bits (73), Expect = 0.27
 Identities = 13/29 (44%), Positives = 22/29 (75%)
 Frame = +2

Query: 62  ISETMQSFIRALLNPDQSRRPRADNLLNH 148
           IS  +QS I++++ PD ++RP A+ LL+H
Sbjct: 320 ISLELQSVIKSMMKPDPAQRPTAEQLLSH 348
>sp|P47810|WEE1_MOUSE Wee1-like protein kinase
          Length = 646

 Score = 32.0 bits (71), Expect = 0.46
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 56  QPISETMQSFIRALLNPDQSRRPRADNLLNHSI 154
           Q +S+ +   +R +++PD  RRP A  L+ HS+
Sbjct: 535 QVLSQEVTELLRVMIHPDPERRPSAMELVKHSV 567
>sp|Q10407|MKH1_SCHPO MAP kinase kinase kinase mkh1
          Length = 1116

 Score = 32.0 bits (71), Expect = 0.46
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +2

Query: 2    VAVMNKIVTTKKIECTPCQPISETMQS---FIRALLNPDQSRRPRADNLLNHSIFNNCDE 172
            +  M K+ T KK    P + +S+       F+ A    +   RP A+ LLNH  F  CDE
Sbjct: 1040 IQAMFKLGTEKKAPPIPSELVSQVSPEAIQFLNACFTVNADVRPTAEELLNHP-FMKCDE 1098

Query: 173  FYS 181
             ++
Sbjct: 1099 EFN 1101
>sp|Q63802|WEE1_RAT Wee1-like protein kinase
          Length = 646

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 56  QPISETMQSFIRALLNPDQSRRPRADNLLNHSI 154
           Q +S+ +   ++ +++PD  RRP A  L+ HS+
Sbjct: 535 QVLSQELTELLKVMIHPDPERRPSAMVLVKHSV 567
>sp|P54936|LIN2_CAEEL Abnormal cell lineage protein 2 (Protein lin-2)
          Length = 961

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 62  ISETMQSFIRALLNPDQSRRPRADNLLNH 148
           ISE+ ++ +R +LN D S+R  A   LNH
Sbjct: 250 ISESARNLVRRMLNADPSKRISAKEALNH 278
>sp|P30291|WEE1_HUMAN Wee1-like protein kinase (WEE1hu)
          Length = 646

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 56  QPISETMQSFIRALLNPDQSRRPRADNLLNHSI 154
           Q +S+     ++ +++PD  RRP A  L+ HS+
Sbjct: 536 QVLSQEFTELLKVMIHPDPERRPSAMALVKHSV 568
>sp|Q8VCR8|MYLK2_MOUSE Myosin light chain kinase 2, skeletal/cardiac muscle (MLCK2)
          Length = 240

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +2

Query: 56  QPISETMQSFIRALLNPDQSRRPRADNLLNHSIFNNCDE 172
           + +S+  + F+  LL  DQS R  A+  L H   NN  E
Sbjct: 151 EAVSDEAKDFVSNLLTKDQSARMSAEQCLAHPWLNNLAE 189
>sp|Q9DBQ7|PACE1_MOUSE Protein-associating with the carboxyl-terminal domain of ezrin
           (Ezrin-binding protein PACE-1) (SCY1-like protein 3)
          Length = 735

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +2

Query: 62  ISETMQSFIRALLNPDQSRRPRADNLLNHSIFNN 163
           +S  +Q    ALLNP    RP    LL+H  F N
Sbjct: 214 LSSFLQILHSALLNPMPECRPALSTLLSHDFFRN 247
>sp|P20689|MYLK2_RAT Myosin light chain kinase 2, skeletal/cardiac muscle (MLCK2)
          Length = 610

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 56  QPISETMQSFIRALLNPDQSRRPRADNLLNHSIFNNCDE 172
           + +S+  + F+  L+  DQS R  A+  L H   NN  E
Sbjct: 521 EAVSDEAKDFVSNLITKDQSARMSAEQCLAHPWLNNLAE 559
>sp|O14733|MP2K7_HUMAN Dual specificity mitogen-activated protein kinase kinase 7 (MAP
           kinase kinase 7) (MAPKK 7) (MAPK/ERK kinase 7)
           (JNK-activating kinase 2) (c-Jun N-terminal kinase
           kinase 2) (JNK kinase 2) (JNKK 2)
          Length = 419

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 65  SETMQSFIRALLNPDQSRRPRADNLLNHS 151
           S   QSF++  L  D  +RP+ + LL HS
Sbjct: 350 SGDFQSFVKDCLTKDHRKRPKYNKLLEHS 378
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,133,997
Number of Sequences: 369166
Number of extensions: 306590
Number of successful extensions: 752
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 68,354,980
effective HSP length: 49
effective length of database: 59,302,965
effective search space used: 1719785985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)