Planaria EST Database


DrC_01728

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01728
         (846 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9UKB1|FBW1B_HUMAN  F-box/WD-repeat protein 11 (F-box/WD-...   130   5e-30
sp|Q9Y297|FBW1A_HUMAN  F-box/WD-repeat protein 1A (F-box and...   129   8e-30
sp|Q91854|TRCB_XENLA  Beta-TrCP (Beta-transducin repeat-cont...   129   8e-30
sp|Q09990|LIN23_CAEEL  F-box/WD-repeat protein lin-23 (Abnor...   121   2e-27
sp|Q969H0|FBXW7_HUMAN  F-box/WD-repeat protein 7 (F-box and ...    65   2e-10
sp|Q8VBV4|FBXW7_MOUSE  F-box/WD-repeat protein 7 (F-box and ...    65   2e-10
sp|Q9VZF4|FBXW7_DROME  F-box/WD-repeat protein 7 (F-box and ...    64   4e-10
sp|Q09855|POF11_SCHPO  F-box/WD-repeat protein pof11               50   6e-06
sp|Q01277|SCON2_NEUCR  Sulfur controller 2 (SCON2)                 50   1e-05
sp|Q93794|SEL10_CAEEL  F-box/WD-repeat protein sel-10 (Suppr...    48   3e-05
>sp|Q9UKB1|FBW1B_HUMAN F-box/WD-repeat protein 11 (F-box/WD-repeat protein 1B) (F-box and
           WD-repeats protein beta-TrCP2)
          Length = 542

 Score =  130 bits (327), Expect = 5e-30
 Identities = 63/87 (72%), Positives = 74/87 (85%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           RFD+K IVSGAYDGKIKVWDL AAL+P++PA++LCL+TL +H+GRVFRLQFDEFQI+SSS
Sbjct: 450 RFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSS 509

Query: 183 HDDTILIWDFLDTGVNQDSGMNMVRSP 263
           HDDTILIWDFL+      S  N  RSP
Sbjct: 510 HDDTILIWDFLNV---PPSAQNETRSP 533

 Score = 57.0 bits (136), Expect = 6e-08
 Identities = 30/74 (40%), Positives = 43/74 (58%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           ++D + I+SG  D  IK+WD  +           CL+ LT HTG V  LQ+DE  IV+ S
Sbjct: 247 QYDDEKIISGLRDNSIKIWDKTSLE---------CLKVLTGHTGSVLCLQYDERVIVTGS 297

Query: 183 HDDTILIWDFLDTG 224
            D T+ +WD ++TG
Sbjct: 298 SDSTVRVWD-VNTG 310

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
 Frame = +3

Query: 6   FDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLC--LQTLTQHTGRVFRLQFDEFQIVSS 179
           FD KYIVS + D  IKVW           + S C  ++TL  H   +  LQ+ +  +VS 
Sbjct: 371 FDDKYIVSASGDRTIKVW-----------STSTCEFVRTLNGHKRGIACLQYRDRLVVSG 419

Query: 180 SHDDTILIWD 209
           S D+TI +WD
Sbjct: 420 SSDNTIRLWD 429

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 21/69 (30%), Positives = 36/69 (52%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           ++  + +VSG+ D  I++WD+             CL+ L  H   V  ++FD  +IVS +
Sbjct: 410 QYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRFDNKRIVSGA 460

Query: 183 HDDTILIWD 209
           +D  I +WD
Sbjct: 461 YDGKIKVWD 469

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 22/68 (32%), Positives = 34/68 (50%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           RF +  +V+ + D  I VWD+ +A       +    + L  H   V  + FD+  IVS+S
Sbjct: 327 RFSNGLMVTCSKDRSIAVWDMASA------TDITLRRVLVGHRAAVNVVDFDDKYIVSAS 380

Query: 183 HDDTILIW 206
            D TI +W
Sbjct: 381 GDRTIKVW 388

 Score = 30.4 bits (67), Expect = 6.4
 Identities = 12/34 (35%), Positives = 24/34 (70%)
 Frame = +3

Query: 108 LQTLTQHTGRVFRLQFDEFQIVSSSHDDTILIWD 209
           +Q  ++++  V+ LQ+D+ +I+S   D++I IWD
Sbjct: 233 IQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWD 266
>sp|Q9Y297|FBW1A_HUMAN F-box/WD-repeat protein 1A (F-box and WD-repeats protein beta-TrCP)
           (E3RSIkappaB) (pIkappaBalpha-E3 receptor subunit)
          Length = 605

 Score =  129 bits (325), Expect = 8e-30
 Identities = 60/72 (83%), Positives = 69/72 (95%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           RFD+K IVSGAYDGKIKVWDLVAAL+P++PA +LCL+TL +H+GRVFRLQFDEFQIVSSS
Sbjct: 513 RFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSS 572

Query: 183 HDDTILIWDFLD 218
           HDDTILIWDFL+
Sbjct: 573 HDDTILIWDFLN 584

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSL-CLQTLTQHTGRVFRLQFDEFQIVSS 179
           ++D + IVSG  D  IK+WD           N+L C + LT HTG V  LQ+DE  I++ 
Sbjct: 310 QYDDQKIVSGLRDNTIKIWD----------KNTLECKRILTGHTGSVLCLQYDERVIITG 359

Query: 180 SHDDTILIWDFLDTG 224
           S D T+ +WD ++TG
Sbjct: 360 SSDSTVRVWD-VNTG 373

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
 Frame = +3

Query: 6   FDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLC--LQTLTQHTGRVFRLQFDEFQIVSS 179
           FD KYIVS + D  IKVW+            S C  ++TL  H   +  LQ+ +  +VS 
Sbjct: 434 FDDKYIVSASGDRTIKVWN-----------TSTCEFVRTLNGHKRGIACLQYRDRLVVSG 482

Query: 180 SHDDTILIWD 209
           S D+TI +WD
Sbjct: 483 SSDNTIRLWD 492

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 21/71 (29%), Positives = 37/71 (52%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           ++  + +VSG+ D  I++WD+             CL+ L  H   V  ++FD  +IVS +
Sbjct: 473 QYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRFDNKRIVSGA 523

Query: 183 HDDTILIWDFL 215
           +D  I +WD +
Sbjct: 524 YDGKIKVWDLV 534

 Score = 39.3 bits (90), Expect = 0.014
 Identities = 23/69 (33%), Positives = 36/69 (52%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           RF++  +V+ + D  I VWD+       SP +    + L  H   V  + FD+  IVS+S
Sbjct: 390 RFNNGMMVTCSKDRSIAVWDMA------SPTDITLRRVLVGHRAAVNVVDFDDKYIVSAS 443

Query: 183 HDDTILIWD 209
            D TI +W+
Sbjct: 444 GDRTIKVWN 452

 Score = 30.4 bits (67), Expect = 6.4
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +3

Query: 138 VFRLQFDEFQIVSSSHDDTILIWD 209
           V+ LQ+D+ +IVS   D+TI IWD
Sbjct: 306 VYCLQYDDQKIVSGLRDNTIKIWD 329
>sp|Q91854|TRCB_XENLA Beta-TrCP (Beta-transducin repeat-containing protein)
          Length = 518

 Score =  129 bits (325), Expect = 8e-30
 Identities = 60/72 (83%), Positives = 69/72 (95%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           RFD+K IVSGAYDGKIKVWDLVAAL+P++PA +LCL+TL +H+GRVFRLQFDEFQIVSSS
Sbjct: 442 RFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSS 501

Query: 183 HDDTILIWDFLD 218
           HDDTILIWDFL+
Sbjct: 502 HDDTILIWDFLN 513

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSL-CLQTLTQHTGRVFRLQFDEFQIVSS 179
           ++D + IVSG  D  IK+WD           N+L C + L  HTG V  LQ+DE  I++ 
Sbjct: 239 QYDDQKIVSGLRDNTIKIWD----------KNTLECKRVLMGHTGSVLCLQYDERVIITG 288

Query: 180 SHDDTILIWDFLDTG 224
           S D T+ +WD ++TG
Sbjct: 289 SSDSTVRVWD-VNTG 302

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
 Frame = +3

Query: 6   FDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLC--LQTLTQHTGRVFRLQFDEFQIVSS 179
           FD KYIVS + D  IKVW+            S C  ++TL  H   +  LQ+ +  +VS 
Sbjct: 363 FDDKYIVSASGDRTIKVWN-----------TSTCEFVRTLNGHKRGIACLQYRDRLVVSG 411

Query: 180 SHDDTILIWD 209
           S D+TI +WD
Sbjct: 412 SSDNTIRLWD 421

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 21/71 (29%), Positives = 37/71 (52%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           ++  + +VSG+ D  I++WD+             CL+ L  H   V  ++FD  +IVS +
Sbjct: 402 QYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRFDNKRIVSGA 452

Query: 183 HDDTILIWDFL 215
           +D  I +WD +
Sbjct: 453 YDGKIKVWDLV 463

 Score = 37.0 bits (84), Expect = 0.069
 Identities = 22/69 (31%), Positives = 36/69 (52%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           RF++  +V+ + D  I VWD+ +A       +    + L  H   V  + FD+  IVS+S
Sbjct: 319 RFNNGMMVTCSKDRSIAVWDMASA------TDITLRRVLVGHRAAVNVVDFDDKYIVSAS 372

Query: 183 HDDTILIWD 209
            D TI +W+
Sbjct: 373 GDRTIKVWN 381

 Score = 30.4 bits (67), Expect = 6.4
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +3

Query: 138 VFRLQFDEFQIVSSSHDDTILIWD 209
           V+ LQ+D+ +IVS   D+TI IWD
Sbjct: 235 VYCLQYDDQKIVSGLRDNTIKIWD 258
>sp|Q09990|LIN23_CAEEL F-box/WD-repeat protein lin-23 (Abnormal cell lineage protein 23)
          Length = 665

 Score =  121 bits (304), Expect = 2e-27
 Identities = 57/72 (79%), Positives = 65/72 (90%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           RFD K IVSGAYDGKIKVWDL AAL+P++ ++ +CL +L QHTGRVFRLQFD+FQIVSSS
Sbjct: 432 RFDEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSS 491

Query: 183 HDDTILIWDFLD 218
           HDDTILIWDFLD
Sbjct: 492 HDDTILIWDFLD 503

 Score = 50.1 bits (118), Expect = 8e-06
 Identities = 28/74 (37%), Positives = 40/74 (54%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           ++D   IVSG  D  IK+WD           +  C + L+ HTG V  LQ+D   I+S S
Sbjct: 229 QYDDDKIVSGLRDNTIKIWDR---------KDYSCSRILSGHTGSVLCLQYDNRVIISGS 279

Query: 183 HDDTILIWDFLDTG 224
            D T+ +WD ++TG
Sbjct: 280 SDATVRVWD-VETG 292

 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 22/69 (31%), Positives = 39/69 (56%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           ++  + +VSG+ D  I++WD+          + +CL+ L  H   V  ++FDE +IVS +
Sbjct: 392 QYRGRLVVSGSSDNTIRLWDI---------HSGVCLRVLEGHEELVRCIRFDEKRIVSGA 442

Query: 183 HDDTILIWD 209
           +D  I +WD
Sbjct: 443 YDGKIKVWD 451

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 21/71 (29%), Positives = 38/71 (53%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           ++D++ I+SG+ D  ++VWD+             C++TL  H   V  L+F    +V+ S
Sbjct: 269 QYDNRVIISGSSDATVRVWDV---------ETGECIKTLIHHCEAVLHLRFANGIMVTCS 319

Query: 183 HDDTILIWDFL 215
            D +I +WD +
Sbjct: 320 KDRSIAVWDMV 330

 Score = 39.7 bits (91), Expect = 0.011
 Identities = 24/68 (35%), Positives = 34/68 (50%)
 Frame = +3

Query: 6   FDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSSH 185
           FD +YIVS + D  IKVW +              ++TL  H   +  LQ+    +VS S 
Sbjct: 353 FDDRYIVSASGDRTIKVWSMDTLE---------FVRTLAGHRRGIACLQYRGRLVVSGSS 403

Query: 186 DDTILIWD 209
           D+TI +WD
Sbjct: 404 DNTIRLWD 411

 Score = 39.3 bits (90), Expect = 0.014
 Identities = 26/73 (35%), Positives = 38/73 (52%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           RF +  +V+ + D  I VWD+V      SP +    + L  H   V  + FD+  IVS+S
Sbjct: 309 RFANGIMVTCSKDRSIAVWDMV------SPRDITIRRVLVGHRAAVNVVDFDDRYIVSAS 362

Query: 183 HDDTILIWDFLDT 221
            D TI +W  +DT
Sbjct: 363 GDRTIKVWS-MDT 374

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = +3

Query: 120 TQHTGRVFRLQFDEFQIVSSSHDDTILIWDFLD 218
           ++++  V+ LQ+D+ +IVS   D+TI IWD  D
Sbjct: 219 SENSKGVYCLQYDDDKIVSGLRDNTIKIWDRKD 251
>sp|Q969H0|FBXW7_HUMAN F-box/WD-repeat protein 7 (F-box and WD-40 domain protein 7) (F-box
           protein FBX30) (hCdc4) (Archipelago homolog) (hAgo)
           (SEL-10)
          Length = 707

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 33/74 (44%), Positives = 44/74 (59%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           ++D + +VSGAYD  +KVWD         P    CL TL  HT RV+ LQFD   +VS S
Sbjct: 508 QYDGRRVVSGAYDFMVKVWD---------PETETCLHTLQGHTNRVYSLQFDGIHVVSGS 558

Query: 183 HDDTILIWDFLDTG 224
            D +I +WD ++TG
Sbjct: 559 LDTSIRVWD-VETG 571

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
 Frame = +3

Query: 21  IVSGAYDGKIKVWDLVAALNPQSPANSLCLQTL---TQHTGRVFRLQFDEFQIVSSSHDD 191
           +VSG  D  +K+WD+             CLQTL    +H   V  LQF++  +++SS D 
Sbjct: 594 LVSGNADSTVKIWDI---------KTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDG 644

Query: 192 TILIWD-----FLDTGVNQDSGMNMVRSPVVSLDNDDEPIKPVGEQGSMNNASTSQNLVF 356
           T+ +WD     F+   V  +SG +      +   N     K V   GS N    ++ LV 
Sbjct: 645 TVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASN----TKLVCAVGSRNGTEETKLLVL 700

Query: 357 EYDLN 371
           ++D++
Sbjct: 701 DFDVD 705

 Score = 43.9 bits (102), Expect = 6e-04
 Identities = 25/69 (36%), Positives = 35/69 (50%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           +F    IVSG+ D  +KVW  V            CL+TL  HTG V+  Q  +  I+S S
Sbjct: 388 QFCGNRIVSGSDDNTLKVWSAVTGK---------CLRTLVGHTGGVWSSQMRDNIIISGS 438

Query: 183 HDDTILIWD 209
            D T+ +W+
Sbjct: 439 TDRTLKVWN 447

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 20/65 (30%), Positives = 33/65 (50%)
 Frame = +3

Query: 15  KYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSSHDDT 194
           K +VSG+ D  ++VWD+             CL  L  H   V  +Q+D  ++VS ++D  
Sbjct: 472 KRVVSGSRDATLRVWDI---------ETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFM 522

Query: 195 ILIWD 209
           + +WD
Sbjct: 523 VKVWD 527

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 23/68 (33%), Positives = 35/68 (51%)
 Frame = +3

Query: 21  IVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSSHDDTIL 200
           I+SG+ D  +KVW+              C+ TL  HT  V  +   E ++VS S D T+ 
Sbjct: 434 IISGSTDRTLKVWNA---------ETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLR 484

Query: 201 IWDFLDTG 224
           +WD ++TG
Sbjct: 485 VWD-IETG 491
>sp|Q8VBV4|FBXW7_MOUSE F-box/WD-repeat protein 7 (F-box and WD-40 domain protein 7) (F-box
           protein FBW7) (F-box protein Fbxw6) (F-box-WD40 repeat
           protein 6) (SEL-10)
          Length = 629

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 33/74 (44%), Positives = 44/74 (59%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           ++D + +VSGAYD  +KVWD         P    CL TL  HT RV+ LQFD   +VS S
Sbjct: 430 QYDGRRVVSGAYDFMVKVWD---------PETETCLHTLQGHTNRVYSLQFDGIHVVSGS 480

Query: 183 HDDTILIWDFLDTG 224
            D +I +WD ++TG
Sbjct: 481 LDTSIRVWD-VETG 493

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
 Frame = +3

Query: 21  IVSGAYDGKIKVWDLVAALNPQSPANSLCLQTL---TQHTGRVFRLQFDEFQIVSSSHDD 191
           +VSG  D  +K+WD+             CLQTL   ++H   V  LQF++  +++SS D 
Sbjct: 516 LVSGNADSTVKIWDI---------KTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDG 566

Query: 192 TILIWD-----FLDTGVNQDSGMNMVRSPVVSLDNDDEPIKPVGEQGSMNNASTSQNLVF 356
           T+ +WD     F+   V  +SG +      +   N     K V   GS N    ++ LV 
Sbjct: 567 TVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASN----TKLVCAVGSRNGTEETKLLVL 622

Query: 357 EYDLN 371
           ++D++
Sbjct: 623 DFDVD 627

 Score = 43.9 bits (102), Expect = 6e-04
 Identities = 25/69 (36%), Positives = 35/69 (50%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           +F    IVSG+ D  +KVW  V            CL+TL  HTG V+  Q  +  I+S S
Sbjct: 310 QFCGNRIVSGSDDNTLKVWSAVTGK---------CLRTLVGHTGGVWSSQMRDNIIISGS 360

Query: 183 HDDTILIWD 209
            D T+ +W+
Sbjct: 361 TDRTLKVWN 369

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 20/65 (30%), Positives = 33/65 (50%)
 Frame = +3

Query: 15  KYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSSHDDT 194
           K +VSG+ D  ++VWD+             CL  L  H   V  +Q+D  ++VS ++D  
Sbjct: 394 KRVVSGSRDATLRVWDI---------ETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFM 444

Query: 195 ILIWD 209
           + +WD
Sbjct: 445 VKVWD 449

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 23/68 (33%), Positives = 35/68 (51%)
 Frame = +3

Query: 21  IVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSSHDDTIL 200
           I+SG+ D  +KVW+              C+ TL  HT  V  +   E ++VS S D T+ 
Sbjct: 356 IISGSTDRTLKVWNA---------ETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLR 406

Query: 201 IWDFLDTG 224
           +WD ++TG
Sbjct: 407 VWD-IETG 413
>sp|Q9VZF4|FBXW7_DROME F-box/WD-repeat protein 7 (F-box and WD-40 domain protein 7)
            (Archipelago protein)
          Length = 1326

 Score = 64.3 bits (155), Expect = 4e-10
 Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
 Frame = +3

Query: 3    RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
            ++D K IVSGAYD  +K+W          P    CL TL  HT RV+ LQFD   +VS S
Sbjct: 1122 QYDGKLIVSGAYDYMVKIWH---------PERQECLHTLQGHTNRVYSLQFDGLHVVSGS 1172

Query: 183  HDDTILIWDFLDTG---------VNQDSGMNMVRSPVVSLDNDDEPIK 299
             D +I +WD ++TG          +  SGM + ++ +VS  N D  +K
Sbjct: 1173 LDTSIRVWD-VETGNCKHTLMGHQSLTSGMELRQNILVS-GNADSTVK 1218

 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 29/74 (39%), Positives = 39/74 (52%)
 Frame = +3

Query: 3    RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
            +F    IVSG+ D  +KVW  V         N  CL+TL  HTG V+  Q     I+S S
Sbjct: 1002 QFSGNRIVSGSDDNTLKVWSAV---------NGKCLRTLVGHTGGVWSSQMSGNIIISGS 1052

Query: 183  HDDTILIWDFLDTG 224
             D T+ +WD +D+G
Sbjct: 1053 TDRTLKVWD-MDSG 1065

 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 13/129 (10%)
 Frame = +3

Query: 21   IVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLT---QHTGRVFRLQFDEFQIVSSSHDD 191
            +VSG  D  +KVWD+             CLQTL+   +H   V  LQF+   +V+SS D 
Sbjct: 1208 LVSGNADSTVKVWDITTGQ---------CLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDG 1258

Query: 192  TILIW-----DFLDTGVNQDSGMN-----MVRSPVVSLDNDDEPIKPVGEQGSMNNASTS 341
            T+ +W     DF+   V  DSG +      +R+      ND + I  V   GS N    +
Sbjct: 1259 TVKLWDVKTGDFIRNLVALDSGGSGGVVWRIRA------NDTKLICAV---GSRNGTEET 1309

Query: 342  QNLVFEYDL 368
            + +V ++D+
Sbjct: 1310 KLMVLDFDV 1318

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 21/63 (33%), Positives = 32/63 (50%)
 Frame = +3

Query: 21   IVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSSHDDTIL 200
            I+SG+ D  +KVWD+          +  C+ TL  HT  V  +     ++VS S D T+ 
Sbjct: 1048 IISGSTDRTLKVWDM---------DSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLR 1098

Query: 201  IWD 209
            +WD
Sbjct: 1099 VWD 1101

 Score = 37.4 bits (85), Expect = 0.053
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +3

Query: 21   IVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSSHDDTIL 200
            +VSG+ D  ++VWD+             CL  L  H   V  +Q+D   IVS ++D  + 
Sbjct: 1088 VVSGSRDATLRVWDI---------EQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVK 1138

Query: 201  IW 206
            IW
Sbjct: 1139 IW 1140
>sp|Q09855|POF11_SCHPO F-box/WD-repeat protein pof11
          Length = 506

 Score = 50.4 bits (119), Expect = 6e-06
 Identities = 25/72 (34%), Positives = 43/72 (59%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           RF+ + IVSG YDG +++W+        +     C+   ++++ RVF LQFD  +I++ +
Sbjct: 436 RFNDEKIVSGGYDGTVRIWNF-------NTGEQHCVLHNSRNS-RVFGLQFDHRRIIACT 487

Query: 183 HDDTILIWDFLD 218
           H   IL+W+F D
Sbjct: 488 HSSEILVWNFDD 499

 Score = 39.3 bits (90), Expect = 0.014
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQ--IVS 176
           ++D + +VSG+ D  + VWD+          +   L  L  H+G V  L F   +  +VS
Sbjct: 228 QYDDEIMVSGSKDRTVSVWDV---------NSRFILYKLYGHSGSVLCLDFCRRRNLLVS 278

Query: 177 SSHDDTILIWDF 212
            S D TI+IWD+
Sbjct: 279 GSSDSTIIIWDW 290

 Score = 38.1 bits (87), Expect = 0.031
 Identities = 27/98 (27%), Positives = 49/98 (50%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           +++ K+IVSG+ D  I++++          ++   L+ L  H   +  ++F++ +IVS  
Sbjct: 396 QYNGKFIVSGSSDLTIRIFEA---------SSGKLLRMLQGHEDLIRTVRFNDEKIVSGG 446

Query: 183 HDDTILIWDFLDTGVNQDSGMNMVRSPVVSLDNDDEPI 296
           +D T+ IW+F +TG       N   S V  L  D   I
Sbjct: 447 YDGTVRIWNF-NTGEQHCVLHNSRNSRVFGLQFDHRRI 483

 Score = 35.0 bits (79), Expect = 0.26
 Identities = 25/87 (28%), Positives = 41/87 (47%)
 Frame = +3

Query: 21  IVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSSHDDTIL 200
           +VSG+ D  I +WD           N   L+    HT  V  +   E  I+SSS D T  
Sbjct: 276 LVSGSSDSTIIIWDW---------QNRRPLKVYFGHTDNVLGVVVSENYIISSSRDHTAR 326

Query: 201 IWDFLDTGVNQDSGMNMVRSPVVSLDN 281
           +W  LD     ++ M+++R  + S+++
Sbjct: 327 VWR-LDATSPAEACMHVLRGHLASVNS 352
>sp|Q01277|SCON2_NEUCR Sulfur controller 2 (SCON2)
          Length = 650

 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 22/70 (31%), Positives = 39/70 (55%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           + D   + +G+YD  IK+W++             C++TL  HT  +  LQFD+ +++S S
Sbjct: 301 QLDDNILATGSYDTTIKIWNI---------ETEECIRTLVGHTAGIRALQFDDSKLISGS 351

Query: 183 HDDTILIWDF 212
            D TI +W++
Sbjct: 352 LDHTIKVWNW 361

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 24/70 (34%), Positives = 33/70 (47%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSS 182
           +FD   ++SG+ D  IKVW+              CL T   HT  V  + FD   + S S
Sbjct: 341 QFDDSKLISGSLDHTIKVWNW---------HTGECLSTFAAHTDSVISVHFDGHLLASGS 391

Query: 183 HDDTILIWDF 212
            D T+ I+DF
Sbjct: 392 SDKTVKIFDF 401

 Score = 37.0 bits (84), Expect = 0.069
 Identities = 17/65 (26%), Positives = 32/65 (49%)
 Frame = +3

Query: 15  KYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSSHDDT 194
           +Y ++G  D  +++WD          A   CL+TL  H   V+ L  D  +++S ++D  
Sbjct: 549 RYFMTGGLDSTMRLWD---------SATGRCLRTLFGHLEGVWSLAGDTIRVISGANDGM 599

Query: 195 ILIWD 209
           +  W+
Sbjct: 600 VKTWE 604

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 21/68 (30%), Positives = 31/68 (45%)
 Frame = +3

Query: 9   DSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSSHD 188
           D+  ++SGA DG +K W+         P +  C  T T H G V  +   +  + S S D
Sbjct: 587 DTIRVISGANDGMVKTWE---------PRSGKCDATYTGHCGPVTCVGLSDSLMASGSED 637

Query: 189 DTILIWDF 212
            TI +  F
Sbjct: 638 GTIRLHSF 645
>sp|Q93794|SEL10_CAEEL F-box/WD-repeat protein sel-10 (Suppressor/enhancer of lin-12)
           (Sel-10 protein)
          Length = 587

 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
 Frame = +3

Query: 3   RFDSKYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQ--IVS 176
           +FD   +VSG YD  +K+W         +     C++TLT H  RV+ L F+  +  + S
Sbjct: 385 QFDGTTVVSGGYDFTVKIW---------NAHTGRCIRTLTGHNNRVYSLLFESERSIVCS 435

Query: 177 SSHDDTILIWDF 212
            S D +I +WDF
Sbjct: 436 GSLDTSIRVWDF 447

 Score = 37.7 bits (86), Expect = 0.040
 Identities = 22/65 (33%), Positives = 31/65 (47%)
 Frame = +3

Query: 15  KYIVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSSHDDT 194
           +YIVSG+ D  +KVW         S  +   L TL  HT  V  +      +V+ S D T
Sbjct: 309 RYIVSGSTDRTVKVW---------STVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTT 359

Query: 195 ILIWD 209
           + +WD
Sbjct: 360 LRVWD 364

 Score = 35.8 bits (81), Expect = 0.15
 Identities = 20/63 (31%), Positives = 33/63 (52%)
 Frame = +3

Query: 21  IVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSSHDDTIL 200
           +V+G+ D  ++VWD+ +  +         L TL  H   V  +QFD   +VS  +D T+ 
Sbjct: 351 LVTGSRDTTLRVWDVESGRH---------LATLHGHHAAVRCVQFDGTTVVSGGYDFTVK 401

Query: 201 IWD 209
           IW+
Sbjct: 402 IWN 404

 Score = 34.3 bits (77), Expect = 0.45
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
 Frame = +3

Query: 21  IVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEFQIVSSSHDDTIL 200
           + SG+ D  I+VWD         P    C+  L  HT     +Q     +VS + D  + 
Sbjct: 433 VCSGSLDTSIRVWDFTR------PEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVR 486

Query: 201 IWDFLD-TGVNQDSGMNMVRSPVVSL 275
           +WD  + T V+  SG    RS + SL
Sbjct: 487 VWDIHEGTCVHMLSGH---RSAITSL 509

 Score = 32.3 bits (72), Expect = 1.7
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +3

Query: 21  IVSGAYDGKIKVWDLVAALNPQSPANSLCLQTLTQHTGRVFRLQFDEF--QIVSSSHDDT 194
           +V+G+ D  +KVW +              + TL  HTG V+  Q  +    IVS S D T
Sbjct: 269 LVTGSDDNTLKVWCI---------DKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRT 319

Query: 195 ILIWDFLD 218
           + +W  +D
Sbjct: 320 VKVWSTVD 327
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,432,599
Number of Sequences: 369166
Number of extensions: 1339832
Number of successful extensions: 4248
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4069
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8293644780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)