Planaria EST Database


DrC_01688

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01688
         (932 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q91YI4|ARRB2_MOUSE  Beta-arrestin-2 (Arrestin, beta 2)          45   4e-04
sp|P29066|ARRB1_RAT  Beta-arrestin-1 (Arrestin, beta 1)            45   4e-04
sp|P29067|ARRB2_RAT  Beta-arrestin-2 (Arrestin, beta 2)            45   4e-04
sp|P49407|ARRB1_HUMAN  Beta-arrestin-1 (Arrestin, beta 1)          45   4e-04
sp|P17870|ARRB1_BOVIN  Beta-arrestin-1 (Arrestin, beta 1)          45   4e-04
sp|Q8BWG8|ARRB1_MOUSE  Beta-arrestin-1 (Arrestin, beta 1)          43   0.001
sp|P32121|ARRB2_HUMAN  Beta-arrestin-2 (Arrestin, beta 2)          42   0.002
sp|P32120|ARRB2_BOVIN  Beta-arrestin-2 (Arrestin, beta 2) (A...    42   0.002
sp|P55274|ARRH_HELVI  ARRESTIN HOMOLOG                             40   0.007
sp|P15372|ARRA_DROME  Phosrestin-2 (Phosrestin II) (Arrestin...    40   0.009
>sp|Q91YI4|ARRB2_MOUSE Beta-arrestin-2 (Arrestin, beta 2)
          Length = 410

 Score = 44.7 bits (104), Expect = 4e-04
 Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
 Frame = +1

Query: 451 GLHVFNFEFQLPAHLPASFVVPDVPEADCFHAFVIYNIKIEVVNVTHQVSHSRERDILVF 630
           G H   F F +P +LP S  +   PE       V + I+        + SH R    L+ 
Sbjct: 110 GQHAHPFFFTIPQNLPCSVTLQPGPEDTGKACGVDFEIRAFCAKSIEEKSHKRNSVRLII 169

Query: 631 KSLDLT-QFPKLKDKITLRKEFQISECCASKSKLLCELTVNKCAFVPGEILSVEVLVKNG 807
           + +    + P  +      + F +S+    +  L  E +++K  +  GE L+V V V N 
Sbjct: 170 RKVQFAPETPGPQPSAETTRHFLMSD----RRSLHLEASLDKELYYHGEPLNVNVHVTNN 225

Query: 808 SAKPIESVQLSLYQ 849
           SAK ++ +++S+ Q
Sbjct: 226 SAKTVKKIRVSVRQ 239
>sp|P29066|ARRB1_RAT Beta-arrestin-1 (Arrestin, beta 1)
          Length = 418

 Score = 44.7 bits (104), Expect = 4e-04
 Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
 Frame = +1

Query: 403 EDRYESNCCPEFIITK-GLHVFNFEFQLPAHLPASFVVPDVPEADCFHAFVIYNIKIEVV 579
           ED+       E +I K G H + F F++P +LP S  +   PE       V Y +K    
Sbjct: 92  EDKKPLTRLQERLIKKLGEHAYPFTFEIPPNLPCSVTLQPGPEDTGKACGVDYEVKAFCA 151

Query: 580 NVTHQVSHSRERDILVFKSLDLT-QFPKLKDKITLRKEFQISECCASKSKLLCELTVNKC 756
               +  H R    LV + +    + P  +      ++F +S+       L  E +++K 
Sbjct: 152 ENLEEKIHKRNSVRLVIRKVQYAPERPGPQPTAETTRQFLMSD-----KPLHLEASLDKE 206

Query: 757 AFVPGEILSVEVLVKNGSAKPIESVQLSLYQ 849
            +  GE +SV V V N + K ++ +++S+ Q
Sbjct: 207 IYYHGEPISVNVHVTNNTNKTVKKIKISVRQ 237
>sp|P29067|ARRB2_RAT Beta-arrestin-2 (Arrestin, beta 2)
          Length = 410

 Score = 44.7 bits (104), Expect = 4e-04
 Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
 Frame = +1

Query: 451 GLHVFNFEFQLPAHLPASFVVPDVPEADCFHAFVIYNIKIEVVNVTHQVSHSRERDILVF 630
           G H   F F +P +LP S  +   PE       V + I+        + SH R    L+ 
Sbjct: 110 GQHAHPFFFTIPQNLPCSVTLQPGPEDTGKACGVDFEIRAFCAKSIEEKSHKRNSVRLII 169

Query: 631 KSLDLT-QFPKLKDKITLRKEFQISECCASKSKLLCELTVNKCAFVPGEILSVEVLVKNG 807
           + +    + P  +      + F +S+    +  L  E +++K  +  GE L+V V V N 
Sbjct: 170 RKVQFAPETPGPQPSAETTRHFLMSD----RRSLHLEASLDKELYYHGEPLNVNVHVTNN 225

Query: 808 SAKPIESVQLSLYQ 849
           SAK ++ +++S+ Q
Sbjct: 226 SAKTVKKIRVSVRQ 239
>sp|P49407|ARRB1_HUMAN Beta-arrestin-1 (Arrestin, beta 1)
          Length = 418

 Score = 44.7 bits (104), Expect = 4e-04
 Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
 Frame = +1

Query: 403 EDRYESNCCPEFIITK-GLHVFNFEFQLPAHLPASFVVPDVPEADCFHAFVIYNIKIEVV 579
           ED+       E +I K G H + F F++P +LP S  +   PE       V Y +K    
Sbjct: 92  EDKKPLTRLQERLIKKLGEHAYPFTFEIPPNLPCSVTLQPGPEDTGKACGVDYEVKAFCA 151

Query: 580 NVTHQVSHSRERDILVFKSLDLT-QFPKLKDKITLRKEFQISECCASKSKLLCELTVNKC 756
               +  H R    LV + +    + P  +      ++F +S+       L  E +++K 
Sbjct: 152 ENLEEKIHKRNSVRLVIRKVQYAPERPGPQPTAETTRQFLMSD-----KPLHLEASLDKE 206

Query: 757 AFVPGEILSVEVLVKNGSAKPIESVQLSLYQ 849
            +  GE +SV V V N + K ++ +++S+ Q
Sbjct: 207 IYYHGEPISVNVHVTNNTNKTVKKIKISVRQ 237
>sp|P17870|ARRB1_BOVIN Beta-arrestin-1 (Arrestin, beta 1)
          Length = 418

 Score = 44.7 bits (104), Expect = 4e-04
 Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
 Frame = +1

Query: 403 EDRYESNCCPEFIITK-GLHVFNFEFQLPAHLPASFVVPDVPEADCFHAFVIYNIKIEVV 579
           ED+       E +I K G H + F F++P +LP S  +   PE       V Y +K    
Sbjct: 92  EDKKPLTRLQERLIKKLGEHAYPFTFEIPPNLPCSVTLQPGPEDTGKACGVDYEVKAFCA 151

Query: 580 NVTHQVSHSRERDILVFKSLDLT-QFPKLKDKITLRKEFQISECCASKSKLLCELTVNKC 756
               +  H R    LV + +    + P  +      ++F +S+       L  E +++K 
Sbjct: 152 ENLEEKIHKRNSVRLVIRKVQYAPERPGPQPTAETTRQFLMSD-----KPLHLEASLDKE 206

Query: 757 AFVPGEILSVEVLVKNGSAKPIESVQLSLYQ 849
            +  GE +SV V V N + K ++ +++S+ Q
Sbjct: 207 IYYHGEPISVNVHVTNNTNKTVKKIKISVRQ 237
>sp|Q8BWG8|ARRB1_MOUSE Beta-arrestin-1 (Arrestin, beta 1)
          Length = 418

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 2/151 (1%)
 Frame = +1

Query: 403 EDRYESNCCPEFIITK-GLHVFNFEFQLPAHLPASFVVPDVPEADCFHAFVIYNIKIEVV 579
           ED+       E +I K G H   F F++P +LP S  +   PE       V Y +K    
Sbjct: 92  EDKKPLTRLQERLIKKLGEHACPFTFEIPPNLPCSVTLQPGPEDTGKACGVDYEVKAFCA 151

Query: 580 NVTHQVSHSRERDILVFKSLDLT-QFPKLKDKITLRKEFQISECCASKSKLLCELTVNKC 756
               +  H R    LV + +    + P  +      ++F +S+       L  E +++K 
Sbjct: 152 ENLEEKIHKRNSVRLVIRKVQYAPERPGPQPTAETTRQFLMSD-----KPLHLEASLDKE 206

Query: 757 AFVPGEILSVEVLVKNGSAKPIESVQLSLYQ 849
            +  GE +SV V V N + K ++ +++S+ Q
Sbjct: 207 IYYHGEPISVNVHVTNNTNKTVKKIKISVRQ 237
>sp|P32121|ARRB2_HUMAN Beta-arrestin-2 (Arrestin, beta 2)
          Length = 409

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
 Frame = +1

Query: 451 GLHVFNFEFQLPAHLPASFVVPDVPEADCFHAFVIYNIKIEVVNVTHQVSHSRERDILVF 630
           G H   F F +P +LP S  +   PE       V + I+        + SH R    LV 
Sbjct: 110 GQHAHPFFFTIPQNLPCSVTLQPGPEDTGKACGVDFEIRAFCAKSLEEKSHKRNSVRLVI 169

Query: 631 KSLDLT-QFPKLKDKITLRKEFQISECCASKSKLLCELTVNKCAFVPGEILSVEVLVKNG 807
           + +    + P  +      + F +S+       L  E +++K  +  GE L+V V V N 
Sbjct: 170 RKVQFAPEKPGPQPSAETTRHFLMSD-----RSLHLEASLDKELYYHGEPLNVNVHVTNN 224

Query: 808 SAKPIESVQLSLYQ 849
           S K ++ +++S+ Q
Sbjct: 225 STKTVKKIKVSVRQ 238
>sp|P32120|ARRB2_BOVIN Beta-arrestin-2 (Arrestin, beta 2) (Arrestin-3)
          Length = 420

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
 Frame = +1

Query: 451 GLHVFNFEFQLPAHLPASFVVPDVPEADCFHAFVIYNIKIEVVNVTHQVSHSRERDILVF 630
           G H   F F +P +LP S  +   PE       V + I+        + SH R    LV 
Sbjct: 110 GQHAHPFFFTIPQNLPCSVTLQPGPEDTGKACGVDFEIRAFCAKSLEEKSHKRNSVRLVI 169

Query: 631 KSLDLT-QFPKLKDKITLRKEFQISECCASKSKLLCELTVNKCAFVPGEILSVEVLVKNG 807
           + +    + P  +      + F +S+       L  E +++K  +  GE L+V V V N 
Sbjct: 170 RKVQFAPEKPGPQPSAETTRHFLMSD-----RSLHLEASLDKELYYHGEPLNVNVHVTNN 224

Query: 808 SAKPIESVQLSLYQ 849
           S K ++ +++S+ Q
Sbjct: 225 STKTVKKIKVSVRQ 238
>sp|P55274|ARRH_HELVI ARRESTIN HOMOLOG
          Length = 381

 Score = 40.4 bits (93), Expect = 0.007
 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
 Frame = +1

Query: 412 YESNCCPEFIITK-GLHVFNFEFQLPAHLPASFVVPDVPEADCFHAFVIYNIKIEVVNVT 588
           YE +   E +I K G     F   +P   P S ++    E D     V Y +KI V +  
Sbjct: 94  YELSRTQERLIKKLGDGAIPFRLTVPPGAPGSVILQPGLEDDGEPCGVQYYVKIFVGDSE 153

Query: 589 HQVSHSRERDILVFKSLDLTQF-PKLKDKITLRKEFQISECCASKSKLLCELTVNKCAFV 765
              SH R    L  + +      P  +    +RK+F +S       +L  ELT++K  ++
Sbjct: 154 IDRSHRRSTVALGIRKVQYAPAKPGPQPCTVVRKDFVLSP-----GQLELELTLDKQLYI 208

Query: 766 PGEILSVEVLVKNGSAKPIESVQLSLYQ 849
            GE ++V + V+N S K ++ ++  + Q
Sbjct: 209 HGETVAVNMCVRNHSNKVVKKIKACIQQ 236
>sp|P15372|ARRA_DROME Phosrestin-2 (Phosrestin II) (Arrestin A) (Arrestin-1)
          Length = 364

 Score = 40.0 bits (92), Expect = 0.009
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 4/137 (2%)
 Frame = +1

Query: 451 GLHVFNFEFQLPAHLPASFVVPDVPEADCFHAFVIYNIKIEVVNVTHQVSHSRERDILVF 630
           G + + F  Q+P   PAS V+      +     V Y +KI   +     SH R    L  
Sbjct: 108 GSNAYPFVMQMPPSSPASVVLQQKASDESQPCGVQYFVKIFTGDSDCDRSHRRSTINLGI 167

Query: 631 KSLDLTQFPKLKDKI----TLRKEFQISECCASKSKLLCELTVNKCAFVPGEILSVEVLV 798
           + +   Q+   K  I     +RK+F +     S  +L  E+T++K  +  GE +SV + V
Sbjct: 168 RKV---QYAPTKQGIQPCTVVRKDFLL-----SPGELELEVTLDKQLYHHGEKISVNICV 219

Query: 799 KNGSAKPIESVQLSLYQ 849
           +N S K ++ ++  + Q
Sbjct: 220 RNNSNKVVKKIKAMVQQ 236
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,555,500
Number of Sequences: 369166
Number of extensions: 1946735
Number of successful extensions: 4837
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4834
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9606826000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)