Planaria EST Database


DrC_01687

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01687
         (648 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O43236|SEPT4_HUMAN  Septin-4 (Peanut-like protein 2) (Bra...    78   2e-14
sp|P28661|SEPT4_MOUSE  Septin-4 (Peanut-like protein 2) (Bra...    77   3e-14
sp|P42209|SEPT1_MOUSE  Septin-1 (Differentiation protein 6) ...    75   2e-13
sp|Q8WYJ6|SEPT1_HUMAN  Septin-1 (LARP) (Serologically define...    75   2e-13
sp|Q9Z2Q6|SEPT5_MOUSE  Septin-5 (Peanut-like protein 1) (Cel...    73   7e-13
sp|Q99719|SEPT5_HUMAN  Septin-5 (Peanut-like protein 1) (Cel...    72   2e-12
sp|Q9WVC0|SEPT7_RAT  Septin-7 (CDC10 protein homolog)              60   5e-09
sp|O55131|SEPT7_MOUSE  Septin-7 (CDC10 protein homolog)            60   5e-09
sp|Q5R481|SEPT7_PONPY  Septin-7                                    60   5e-09
sp|Q16181|SEPT7_HUMAN  Septin-7 (CDC10 protein homolog) >gi|...    60   5e-09
>sp|O43236|SEPT4_HUMAN Septin-4 (Peanut-like protein 2) (Brain protein H5) (Cell division
           control-related protein 2) (hCDCREL-2) (Bradeion beta)
           (CE5B3 beta) (Cerebral protein 7)
          Length = 478

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 41/118 (34%), Positives = 64/118 (54%)
 Frame = +2

Query: 5   EVENNKHCDFSRLKVFLLKTHMQDLKDMTSDVLYENYRANCITERMNRRQNERQXXXXXX 184
           EVEN  HCDF +L+  L++THMQDLKD+T +  YENYRA CI         ER       
Sbjct: 371 EVENPGHCDFVKLRTMLVRTHMQDLKDVTRETHYENYRAQCIQSMTRLVVKERNRNKL-- 428

Query: 185 XXXXXNFDRNQDNFSDMKHEIIDPGFEAIVDPENLLHHKEEEIQRMRVLCEKLESQLR 358
                     +++ +D     + PG +   + E L+  K+EE++RM+ +  K++ Q++
Sbjct: 429 ---------TRESGTDFPIPAVPPGTDP--ETEKLIREKDEELRRMQEMLHKIQKQMK 475
>sp|P28661|SEPT4_MOUSE Septin-4 (Peanut-like protein 2) (Brain protein H5)
          Length = 478

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 41/118 (34%), Positives = 64/118 (54%)
 Frame = +2

Query: 5   EVENNKHCDFSRLKVFLLKTHMQDLKDMTSDVLYENYRANCITERMNRRQNERQXXXXXX 184
           EVEN  HCDF +L+  L++THMQDLKD+T +  YENYRA CI         ER       
Sbjct: 371 EVENPGHCDFVKLRTMLVRTHMQDLKDVTRETHYENYRAQCIQSMTRLVVKERNRNKL-- 428

Query: 185 XXXXXNFDRNQDNFSDMKHEIIDPGFEAIVDPENLLHHKEEEIQRMRVLCEKLESQLR 358
                     +++ +D     + PG +   + E L+  K+EE++RM+ +  K++ Q++
Sbjct: 429 ---------TRESGTDFPIPAVPPGTDP--ETEKLIREKDEELRRMQEMLHKIQRQMK 475
>sp|P42209|SEPT1_MOUSE Septin-1 (Differentiation protein 6) (Diff6 protein)
          Length = 365

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 40/120 (33%), Positives = 63/120 (52%)
 Frame = +2

Query: 5   EVENNKHCDFSRLKVFLLKTHMQDLKDMTSDVLYENYRANCITERMNRRQNERQXXXXXX 184
           EVEN  HCDF  L+  L++TH+QDLK++T D+LYE YRA C+         +R       
Sbjct: 251 EVENPHHCDFLNLRRMLVQTHLQDLKEVTHDLLYEGYRARCLQSLARPGARDR------- 303

Query: 185 XXXXXNFDRNQDNFSDMKHEIIDPGFEAIVDPENLLHHKEEEIQRMRVLCEKLESQLRAS 364
                    ++   S      I      + D E L+  K+EE++RM+ + EK+++Q++ S
Sbjct: 304 --------ASRSKLSRQSATEIPLPMLPLADTEKLIREKDEELRRMQEMLEKMQAQMQQS 355
>sp|Q8WYJ6|SEPT1_HUMAN Septin-1 (LARP) (Serologically defined breast cancer antigen
           NY-BR-24)
          Length = 367

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 40/120 (33%), Positives = 63/120 (52%)
 Frame = +2

Query: 5   EVENNKHCDFSRLKVFLLKTHMQDLKDMTSDVLYENYRANCITERMNRRQNERQXXXXXX 184
           EVEN  HCDF  L+  L++TH+QDLK++T D+LYE YRA C+         +R       
Sbjct: 253 EVENPHHCDFLNLRRMLVQTHLQDLKEVTHDLLYEGYRARCLQSLARPGARDR------- 305

Query: 185 XXXXXNFDRNQDNFSDMKHEIIDPGFEAIVDPENLLHHKEEEIQRMRVLCEKLESQLRAS 364
                    ++   S      I      + D E L+  K+EE++RM+ + EK+++Q++ S
Sbjct: 306 --------ASRSKLSRQSATEIPLPMLPLADTEKLIREKDEELRRMQEMLEKMQAQMQQS 357
>sp|Q9Z2Q6|SEPT5_MOUSE Septin-5 (Peanut-like protein 1) (Cell division control related
           protein 1) (CDCREL-1)
          Length = 347

 Score = 72.8 bits (177), Expect = 7e-13
 Identities = 41/118 (34%), Positives = 65/118 (55%)
 Frame = +2

Query: 5   EVENNKHCDFSRLKVFLLKTHMQDLKDMTSDVLYENYRANCITERMNRRQNERQXXXXXX 184
           EVEN  HCDF +L+  L++THM DLKD+T DV YENYRA+CI +  ++            
Sbjct: 249 EVENQAHCDFVKLRNMLIRTHMHDLKDVTCDVHYENYRAHCIQQMTSK------------ 296

Query: 185 XXXXXNFDRNQDNFSDMKHEIIDPGFEAIVDPENLLHHKEEEIQRMRVLCEKLESQLR 358
                     QD+  +    I+ P      + E L+  K+EE++RM+ + +K++ Q++
Sbjct: 297 --------LTQDSRMESPIPIL-PLPTPDAETEKLIRMKDEELRRMQEMLQKMKQQMQ 345
>sp|Q99719|SEPT5_HUMAN Septin-5 (Peanut-like protein 1) (Cell division control related
           protein 1) (CDCREL-1)
          Length = 369

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 40/118 (33%), Positives = 65/118 (55%)
 Frame = +2

Query: 5   EVENNKHCDFSRLKVFLLKTHMQDLKDMTSDVLYENYRANCITERMNRRQNERQXXXXXX 184
           EVEN  HCDF +L+  L++THM DLKD+T DV YENYRA+CI +  ++            
Sbjct: 271 EVENQAHCDFVKLRNMLIRTHMHDLKDVTCDVHYENYRAHCIQQMTSK------------ 318

Query: 185 XXXXXNFDRNQDNFSDMKHEIIDPGFEAIVDPENLLHHKEEEIQRMRVLCEKLESQLR 358
                     QD+  +    I+ P      + E L+  K+EE++RM+ + ++++ Q++
Sbjct: 319 --------LTQDSRMESPIPIL-PLPTPDAETEKLIRMKDEELRRMQEMLQRMKQQMQ 367
>sp|Q9WVC0|SEPT7_RAT Septin-7 (CDC10 protein homolog)
          Length = 436

 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 25/40 (62%), Positives = 35/40 (87%)
 Frame = +2

Query: 2   SEVENNKHCDFSRLKVFLLKTHMQDLKDMTSDVLYENYRA 121
           +EVEN +HCDF+ L+  L++THMQDLKD+T++V YENYR+
Sbjct: 271 AEVENGEHCDFTILRNMLIRTHMQDLKDVTNNVHYENYRS 310
>sp|O55131|SEPT7_MOUSE Septin-7 (CDC10 protein homolog)
          Length = 436

 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 25/40 (62%), Positives = 35/40 (87%)
 Frame = +2

Query: 2   SEVENNKHCDFSRLKVFLLKTHMQDLKDMTSDVLYENYRA 121
           +EVEN +HCDF+ L+  L++THMQDLKD+T++V YENYR+
Sbjct: 271 AEVENGEHCDFTILRNMLIRTHMQDLKDVTNNVHYENYRS 310
>sp|Q5R481|SEPT7_PONPY Septin-7
          Length = 437

 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 25/40 (62%), Positives = 35/40 (87%)
 Frame = +2

Query: 2   SEVENNKHCDFSRLKVFLLKTHMQDLKDMTSDVLYENYRA 121
           +EVEN +HCDF+ L+  L++THMQDLKD+T++V YENYR+
Sbjct: 272 AEVENGEHCDFTILRNMLIRTHMQDLKDVTNNVHYENYRS 311
>sp|Q16181|SEPT7_HUMAN Septin-7 (CDC10 protein homolog)
 sp|Q6Q137|SEPT7_BOVIN Septin-7 (CDC10 protein homolog)
          Length = 437

 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 25/40 (62%), Positives = 35/40 (87%)
 Frame = +2

Query: 2   SEVENNKHCDFSRLKVFLLKTHMQDLKDMTSDVLYENYRA 121
           +EVEN +HCDF+ L+  L++THMQDLKD+T++V YENYR+
Sbjct: 272 AEVENGEHCDFTILRNMLIRTHMQDLKDVTNNVHYENYRS 311
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,352,632
Number of Sequences: 369166
Number of extensions: 1298516
Number of successful extensions: 2872
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2868
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5316264630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)