Planaria EST Database


DrC_01684

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01684
         (465 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8BJS4|UN84B_MOUSE  Sad1/unc-84-like protein 2                 104   1e-22
sp|Q9UH99|UN84B_HUMAN  Sad1/unc-84-like protein 2 (Rab5-inte...   102   6e-22
sp|Q9D666|UN84A_MOUSE  Sad1/unc-84 protein-like 1 (Unc-84 ho...    95   7e-20
sp|O94901|UN84A_HUMAN  Sad1/unc-84 protein-like 1 (Unc-84 ho...    92   6e-19
sp|Q9DA32|SPA4L_MOUSE  Sperm-associated antigen 4-like protein     83   3e-16
sp|Q8TC36|SPA4L_HUMAN  Sperm-associated antigen 4-like prote...    81   1e-15
sp|Q9NPE6|SPA4_HUMAN  Sperm-associated antigen 4 protein (Ou...    79   7e-15
sp|O55034|SPAG4_RAT  Sperm-associated antigen 4 protein (Out...    78   9e-15
sp|Q09825|SAD1_SCHPO  Spindle pole body associated protein sad1    76   4e-14
sp|Q9JJF2|SPAG4_MOUSE  Sperm-associated antigen 4 protein (O...    75   6e-14
>sp|Q8BJS4|UN84B_MOUSE Sad1/unc-84-like protein 2
          Length = 699

 Score =  104 bits (259), Expect = 1e-22
 Identities = 48/116 (41%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
 Frame = +1

Query: 19  PGDCWPFSGSIGHAVIQLSHKVLVNAVSLEHLAARLNHDGKILSAPKQFQIYSLSENTYE 198
           PG+CW F G  G AV++LS ++   AV+LEH+   L+ +  I SAPK F I+   E+  +
Sbjct: 580 PGNCWAFQGPQGFAVVRLSARIRPTAVTLEHVPKALSPNSTISSAPKDFAIFGFDEDLQQ 639

Query: 199 KMELIGTFEYKETDQAIQTFLVEVPKIA--RIIRMDVLNNHGNKDYTCIYRLRIHG 360
           +  L+GTF Y +  + IQTF  +  K+A  +++ + +L N G+ +YTCIYR R+HG
Sbjct: 640 EGTLLGTFAYDQDGEPIQTFYFQASKMATYQVVELRILTNWGHPEYTCIYRFRVHG 695
>sp|Q9UH99|UN84B_HUMAN Sad1/unc-84-like protein 2 (Rab5-interacting protein) (Rab5IP)
          Length = 717

 Score =  102 bits (253), Expect = 6e-22
 Identities = 47/116 (40%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
 Frame = +1

Query: 19  PGDCWPFSGSIGHAVIQLSHKVLVNAVSLEHLAARLNHDGKILSAPKQFQIYSLSENTYE 198
           PG+CW F G  G AV++LS ++   AV+LEH+   L+ +  I SAPK F I+   E+  +
Sbjct: 598 PGNCWAFQGPQGFAVVRLSARIRPTAVTLEHVPKALSPNSTISSAPKDFAIFGFDEDLQQ 657

Query: 199 KMELIGTFEYKETDQAIQTFLVEVPKIA--RIIRMDVLNNHGNKDYTCIYRLRIHG 360
           +  L+G F Y +  + IQTF  + P +A  +++ + +L N G+ +YTCIYR R+HG
Sbjct: 658 EGTLLGKFTYDQDGEPIQTFHFQAPTMATYQVVELRILTNWGHPEYTCIYRFRVHG 713
>sp|Q9D666|UN84A_MOUSE Sad1/unc-84 protein-like 1 (Unc-84 homolog A)
          Length = 913

 Score = 95.1 bits (235), Expect = 7e-20
 Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
 Frame = +1

Query: 19   PGDCWPFSGSIGHAVIQLSHKVLVNAVSLEHLAARLNHDGKILSAPKQFQIYSLSENTYE 198
            PG+CW F GS G+ V++LS K+     ++EH+   L+  G I SAPK F +Y L     E
Sbjct: 794  PGNCWAFKGSQGYLVVRLSMKIYPTTFTMEHIPKTLSPTGNISSAPKDFAVYGLETEYQE 853

Query: 199  KMELIGTFEYKETDQAIQTF-LVEVPKIA-RIIRMDVLNNHGNKDYTCIYRLRIHG 360
            + + +G F Y +   ++Q F  +E P  A +I+ + VL+N G+ +YTC+YR R+HG
Sbjct: 854  EGQPLGRFTYDQEGDSLQMFHTLERPDQAFQIVELRVLSNWGHPEYTCLYRFRVHG 909
>sp|O94901|UN84A_HUMAN Sad1/unc-84 protein-like 1 (Unc-84 homolog A)
          Length = 812

 Score = 92.0 bits (227), Expect = 6e-19
 Identities = 44/117 (37%), Positives = 71/117 (60%), Gaps = 3/117 (2%)
 Frame = +1

Query: 19   PGDCWPFSGSIGHAVIQLSHKVLVNAVSLEHLAARLNHDGKILSAPKQFQIYSLSENTYE 198
            PG+CW F GS G+ V++LS  +   A +LEH+   L+  G I SAPK F +Y L     E
Sbjct: 692  PGNCWAFKGSQGYLVVRLSMMIHPAAFTLEHIPKTLSPTGNISSAPKDFAVYGLENEYQE 751

Query: 199  KMELIGTFEYKETDQAIQTF-LVEVP--KIARIIRMDVLNNHGNKDYTCIYRLRIHG 360
            + +L+G F Y +  +++Q F  ++ P     +I+ + + +N G+ +YTC+YR R+HG
Sbjct: 752  EGQLLGQFTYDQDGESLQMFQALKRPDDTAFQIVELRIFSNWGHPEYTCLYRFRVHG 808
>sp|Q9DA32|SPA4L_MOUSE Sperm-associated antigen 4-like protein
          Length = 348

 Score = 82.8 bits (203), Expect = 3e-16
 Identities = 39/118 (33%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
 Frame = +1

Query: 19  PGDCWPFSGSIGHAVIQLSHKVLVNAVSLEHLAARLNHDGKILSAPKQFQIYSLSENTYE 198
           PG+CW F+   G   I+L+ KV ++ ++L+H+   ++  G + +APK F IY L     E
Sbjct: 221 PGNCWAFASDRGQVTIRLAQKVYLSNITLQHIPKTISLSGSLDTAPKDFVIYGLESLpre 280

Query: 199 KMELIGTFEYKETDQAIQTFLVE--VPKIARIIRMDVLNNHGNKDYTCIYRLRIHGSL 366
           ++  +G F++ + +  IQTF ++   P+    +++ + +N GN  +TC+YR+R+HGS+
Sbjct: 281 EV-FLGAFQF-QPENIIQTFQLQNLPPRSFAAVKVKISSNWGNPRFTCMYRVRVHGSV 336
>sp|Q8TC36|SPA4L_HUMAN Sperm-associated antigen 4-like protein (Testis and spermatogenesis
           related gene 4 protein)
          Length = 379

 Score = 80.9 bits (198), Expect = 1e-15
 Identities = 38/118 (32%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
 Frame = +1

Query: 19  PGDCWPFSGSIGHAVIQLSHKVLVNAVSLEHLAARLNHDGKILSAPKQFQIYSLSENTYE 198
           PG+CW F G  G   IQL+ KV ++ ++L+H+   ++  G + +APK F IY +  +  E
Sbjct: 248 PGNCWAFEGDRGQVTIQLAQKVYLSNLTLQHIPKTISLSGSLDTAPKDFVIYGMEGSPKE 307

Query: 199 KMELIGTFEYKETDQAIQTFLV--EVPKIARIIRMDVLNNHGNKDYTCIYRLRIHGSL 366
           ++  +G F++ + +  IQ F +  +  +    +++ + +N GN  +TC+YR+R+HGS+
Sbjct: 308 EV-FLGAFQF-QPENIIQMFPLQNQPARAFSAVKVKISSNWGNPGFTCLYRVRVHGSV 363
>sp|Q9NPE6|SPA4_HUMAN Sperm-associated antigen 4 protein (Outer dense fiber-associated
           protein SPAG4)
          Length = 437

 Score = 78.6 bits (192), Expect = 7e-15
 Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
 Frame = +1

Query: 19  PGDCWPFSGSIGHAVIQLSHKVLVNAVSLEHLAARLNHDGKILSAPKQFQIYSLSENTYE 198
           PG+CW F G  G  VIQL  +V ++ ++L+H    + H G   SAP+ F ++ L    Y+
Sbjct: 308 PGNCWAFEGDQGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAPRDFAVFGL--QVYD 365

Query: 199 KMEL-IGTFEYKETDQAIQTFLV--EVPKIARIIRMDVLNNHGNKDYTCIYRLRIHG 360
           + E+ +G F +      IQTF +  + P     +++ +L+N G+  +TC+YR+R HG
Sbjct: 366 ETEVSLGKFTFDVEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRFTCLYRVRAHG 422
>sp|O55034|SPAG4_RAT Sperm-associated antigen 4 protein (Outer dense fiber-associated
           protein SPAG4)
          Length = 444

 Score = 78.2 bits (191), Expect = 9e-15
 Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
 Frame = +1

Query: 19  PGDCWPFSGSIGHAVIQLSHKVLVNAVSLEHLAARLNHDGKILSAPKQFQIYSLSENTYE 198
           PG+CW F G  G  VI+L   V ++ ++L+H    + H G   SAP+ F ++ L  +  E
Sbjct: 310 PGNCWAFEGEQGQVVIRLPGHVQLSDITLQHPPPTVAHTGGASSAPRDFAVFGLQADDDE 369

Query: 199 KMELIGTFEYKETDQAIQTFLV--EVPKIARIIRMDVLNNHGNKDYTCIYRLRIHG 360
               +G F ++     IQTF +  + P     +++ +L+N G+  +TC+YR+R HG
Sbjct: 370 TEVFLGKFIFEVQKSEIQTFHLQNDPPSAFPKVKIQILSNWGHPRFTCLYRVRAHG 425
>sp|Q09825|SAD1_SCHPO Spindle pole body associated protein sad1
          Length = 514

 Score = 75.9 bits (185), Expect = 4e-14
 Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
 Frame = +1

Query: 28  CWPFSGSIGHAVIQLSHKVLVNAVSLEHLAARLNHDGKILSAPKQFQIYSLSENTYEKME 207
           CW F GS G   I LS  V V  V++EH+  ++ HD  + SAPK F+++ +   + +   
Sbjct: 373 CWSFQGSEGQLGISLSRPVYVTNVTIEHVQHKIAHD--LSSAPKDFELW-VQGMSSKMFV 429

Query: 208 LIGTFEYKETDQAIQTFLVE-----VPKIARIIRMDVLNNHGNKDYTCIYRLRIHGSL 366
           L+G   Y  T+ +IQTF  E     V +  + + + + +N GN +YTC+Y++R+HG++
Sbjct: 430 LLGKARYSLTEDSIQTFSFESSNYIVAEPIQNVILKIKSNWGNPNYTCLYQVRVHGTV 487
>sp|Q9JJF2|SPAG4_MOUSE Sperm-associated antigen 4 protein (Outer dense fiber-associated
           protein SPAG4)
          Length = 443

 Score = 75.5 bits (184), Expect = 6e-14
 Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
 Frame = +1

Query: 19  PGDCWPFSGSIGHAVIQLSHKVLVNAVSLEHLAARLNHDGKILSAPKQFQIYSLSENTYE 198
           PG+CW F G  G  VI+L   V ++ ++L+H    + H G   SAP+ F +Y L  +  E
Sbjct: 310 PGNCWAFEGDKGQVVIRLPGHVQLSDITLQHPPPTVAHTGGASSAPRDFAVYGLQADD-E 368

Query: 199 KMELIGTFEYKETDQAIQTFLV--EVPKIARIIRMDVLNNHGNKDYTCIYRLRIHG 360
               +G F +      IQTF +  + P     +++ +L+N G+  +TC+YR+R HG
Sbjct: 369 TEVFLGKFIFDVQKSEIQTFHLQNDPPSAFPKVKIQILSNWGHPRFTCLYRVRAHG 424
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,483,989
Number of Sequences: 369166
Number of extensions: 942920
Number of successful extensions: 2376
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2362
length of database: 68,354,980
effective HSP length: 101
effective length of database: 49,696,745
effective search space used: 2633927485
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)