Planaria EST Database


DrC_01654

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01654
         (433 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O00499|BIN1_HUMAN  Myc box dependent interacting protein ...    35   0.068
sp|O08539|BIN1_MOUSE  Myc box dependent-interacting protein ...    35   0.068
sp|O08839|BIN1_RAT  Myc box dependent-interacting protein 1 ...    35   0.068
sp|P38041|BOB1_YEAST  Protein BOB1 (BEM1-binding protein)          34   0.12 
sp|P57075|UAS3_HUMAN  UBASH3A protein                              33   0.20 
sp|Q8BKX1|BAIP2_MOUSE  Brain-specific angiogenesis inhibitor...    32   0.44 
sp|Q9UQB8|BAIP2_HUMAN  Brain-specific angiogenesis inhibitor...    32   0.44 
sp|Q6GMN2|BAIP2_RAT  Brain-specific angiogenesis inhibitor 1...    32   0.44 
sp|Q60437|BAIP2_CRIGR  Brain-specific angiogenesis inhibitor...    32   0.44 
sp|Q5EAD0|BAIP2_BOVIN  Brain-specific angiogenesis inhibitor...    32   0.44 
>sp|O00499|BIN1_HUMAN Myc box dependent interacting protein 1 (Bridging integrator 1)
           (Amphiphysin-like protein) (Amphiphysin II)
           (Box-dependent myc-interacting protein 1)
          Length = 593

 Score = 35.0 bits (79), Expect = 0.068
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
 Frame = +1

Query: 208 YHVIAKFNYNRQXXXXXXXXXXXIIMVLPWEFEDQKEDGWLYGENVE--------TKAKG 363
           + V A+ +Y              +++V+P++  +++++GWL G             K +G
Sbjct: 523 FKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRG 582

Query: 364 LFPENHTTR 390
           +FPEN T R
Sbjct: 583 VFPENFTER 591
>sp|O08539|BIN1_MOUSE Myc box dependent-interacting protein 1 (Bridging integrator 1)
           (Amphiphysin-like protein) (Amphiphysin II) (SH3-domain
           containing protein 9)
          Length = 588

 Score = 35.0 bits (79), Expect = 0.068
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
 Frame = +1

Query: 208 YHVIAKFNYNRQXXXXXXXXXXXIIMVLPWEFEDQKEDGWLYGENVE--------TKAKG 363
           + V A+ +Y              +++V+P++  +++++GWL G             K +G
Sbjct: 518 FKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRG 577

Query: 364 LFPENHTTR 390
           +FPEN T R
Sbjct: 578 VFPENFTER 586
>sp|O08839|BIN1_RAT Myc box dependent-interacting protein 1 (Bridging integrator 1)
           (Amphiphysin-like protein) (Amphiphysin II)
          Length = 588

 Score = 35.0 bits (79), Expect = 0.068
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
 Frame = +1

Query: 208 YHVIAKFNYNRQXXXXXXXXXXXIIMVLPWEFEDQKEDGWLYGENVE--------TKAKG 363
           + V A+ +Y              +++V+P++  +++++GWL G             K +G
Sbjct: 518 FKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRG 577

Query: 364 LFPENHTTR 390
           +FPEN T R
Sbjct: 578 VFPENFTER 586
>sp|P38041|BOB1_YEAST Protein BOB1 (BEM1-binding protein)
          Length = 980

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 304 EDQKEDGWLYGENVETKAKGLFPENHTTR 390
           + +  DGW YG N+ TK +GL+P   T R
Sbjct: 46  DGEYNDGWYYGRNLRTKEEGLYPAVFTKR 74
>sp|P57075|UAS3_HUMAN UBASH3A protein
          Length = 661

 Score = 33.5 bits (75), Expect = 0.20
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +1

Query: 220 AKFNYNRQXXXXXXXXXXXIIMVLPWEFEDQKEDGWLYGENVETKAKGLFPENHTTR 390
           A F Y  Q            I V P + +D+  +GW+ G +  T  +G  PEN+T R
Sbjct: 283 ALFQYKPQNVDELTLSPGDYIFVDPTQ-QDEASEGWVIGISQRTGCRGFLPENYTDR 338
>sp|Q8BKX1|BAIP2_MOUSE Brain-specific angiogenesis inhibitor 1-associated protein 2
           (BAI1-associated protein 2) (BAI-associated protein 2)
           (Insulin receptor substrate p53) (IRSp53) (Insulin
           receptor substrate protein of 53 kDa) (Insulin receptor
           tyrosine kinase 53 kDa substrate)
          Length = 535

 Score = 32.3 bits (72), Expect = 0.44
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 310 QKEDGWLYGENVETKAKGLFPENHT 384
           +  DGW YGE+ +TK +G FP ++T
Sbjct: 409 EARDGWHYGESEKTKMRGWFPFSYT 433
>sp|Q9UQB8|BAIP2_HUMAN Brain-specific angiogenesis inhibitor 1-associated protein 2
           (BAI1-associated protein 2) (BAI-associated protein 2)
           (BAP2 protein) (Insulin receptor substrate p53) (IRSp53)
           (Insulin receptor substrate protein of 53 kDa) (Insulin
           receptor substrate p53/p58) (IRSp53/58) (IRS-58) (Fas
           ligand-associated factor 3) (FLAF3)
          Length = 552

 Score = 32.3 bits (72), Expect = 0.44
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 310 QKEDGWLYGENVETKAKGLFPENHT 384
           +  DGW YGE+ +TK +G FP ++T
Sbjct: 408 EARDGWHYGESEKTKMRGWFPFSYT 432
>sp|Q6GMN2|BAIP2_RAT Brain-specific angiogenesis inhibitor 1-associated protein 2
           (BAI1-associated protein 2) (BAI-associated protein 2)
           (Insulin receptor substrate p53) (IRSp53) (Insulin
           receptor substrate protein of 53 kDa) (Insulin receptor
           tyrosine kinase substrate protein p53)
          Length = 535

 Score = 32.3 bits (72), Expect = 0.44
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 310 QKEDGWLYGENVETKAKGLFPENHT 384
           +  DGW YGE+ +TK +G FP ++T
Sbjct: 409 EARDGWHYGESEKTKMRGWFPFSYT 433
>sp|Q60437|BAIP2_CRIGR Brain-specific angiogenesis inhibitor 1-associated protein 2
           (BAI1-associated protein 2) (BAI-associated protein 2)
           (Insulin receptor substrate p53) (IRSp53) (Insulin
           receptor substrate protein of 53 kDa) (Insulin receptor
           tyrosine kinase 53 kDa substrate) (p58/p53)
          Length = 521

 Score = 32.3 bits (72), Expect = 0.44
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 310 QKEDGWLYGENVETKAKGLFPENHT 384
           +  DGW YGE+ +TK +G FP ++T
Sbjct: 409 EARDGWHYGESEKTKMRGWFPFSYT 433
>sp|Q5EAD0|BAIP2_BOVIN Brain-specific angiogenesis inhibitor 1-associated protein 2
           (BAI1-associated protein 2) (BAI-associated protein 2)
          Length = 521

 Score = 32.3 bits (72), Expect = 0.44
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 310 QKEDGWLYGENVETKAKGLFPENHT 384
           +  DGW YGE+ +TK +G FP ++T
Sbjct: 409 EARDGWHYGESEKTKMRGWFPFSYT 433
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,432,287
Number of Sequences: 369166
Number of extensions: 822267
Number of successful extensions: 2270
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2262
length of database: 68,354,980
effective HSP length: 100
effective length of database: 49,881,480
effective search space used: 2144903640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)