Planaria EST Database


DrC_01629

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01629
         (423 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q13526|PIN1_HUMAN  Peptidyl-prolyl cis-trans isomerase NI...   168   5e-42
sp|Q9QUR7|PIN1_MOUSE  Peptidyl-prolyl cis-trans isomerase NI...   166   2e-41
sp|P54353|DOD_DROME  Dodo protein                                 141   6e-34
sp|O74448|PIN1_SCHPO  Peptidyl-prolyl cis-trans isomerase pin1    135   3e-32
sp|O60045|SSP1_NEUCR  Peptidyl-prolyl cis-trans isomerase ss...   133   2e-31
sp|Q9SL42|PIN1_ARATH  Peptidyl-prolyl cis-trans isomerase 1 ...   125   4e-29
sp|Q94G00|PIN1_MALDO  Peptidyl-prolyl cis-trans isomerase 1 ...   121   7e-28
sp|Q9LEK8|PIN1_DIGLA  Peptidyl-prolyl cis-trans isomerase 1 ...   118   6e-27
sp|P22696|ESS1_YEAST  Peptidyl-prolyl cis-trans isomerase ES...   108   5e-24
sp|P24327|PRSA_BACSU  Foldase protein prsA precursor               68   9e-12
>sp|Q13526|PIN1_HUMAN Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (Rotamase
           Pin1) (PPIase Pin1)
          Length = 163

 Score =  168 bits (425), Expect = 5e-42
 Identities = 84/132 (63%), Positives = 99/132 (75%), Gaps = 8/132 (6%)
 Frame = +1

Query: 4   SQWEFPAVAAEN--------TSSVKCSHLLVKHKESRRASSWREANITRTKEEALELLKS 159
           SQWE P+  + +         + V+CSHLLVKH +SRR SSWR+  ITRTKEEALEL+  
Sbjct: 32  SQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELING 91

Query: 160 YEEKIRSGECSFASLAEQFSDCSSAKRGGDLGHFKRGQMQKPFEDVGFSLKIGEMSGPVW 339
           Y +KI+SGE  F SLA QFSDCSSAK  GDLG F RGQMQKPFED  F+L+ GEMSGPV+
Sbjct: 92  YIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVF 151

Query: 340 TDSGVHLIFRTE 375
           TDSG+H+I RTE
Sbjct: 152 TDSGIHIILRTE 163
>sp|Q9QUR7|PIN1_MOUSE Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (Rotamase
           Pin1) (PPIase Pin1)
          Length = 165

 Score =  166 bits (420), Expect = 2e-41
 Identities = 83/134 (61%), Positives = 98/134 (73%), Gaps = 10/134 (7%)
 Frame = +1

Query: 4   SQWEFPAVAAE----------NTSSVKCSHLLVKHKESRRASSWREANITRTKEEALELL 153
           SQWE P+  +             + V+CSHLLVKH +SRR SSWR+  ITR+KEEALEL+
Sbjct: 32  SQWERPSGGSTVGGSSKNGQGEPAKVRCSHLLVKHSQSRRPSSWRQEKITRSKEEALELI 91

Query: 154 KSYEEKIRSGECSFASLAEQFSDCSSAKRGGDLGHFKRGQMQKPFEDVGFSLKIGEMSGP 333
             Y +KI+SGE  F SLA QFSDCSSAK  GDLG F RGQMQKPFED  F+L+ GEMSGP
Sbjct: 92  NGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGPFSRGQMQKPFEDASFALRTGEMSGP 151

Query: 334 VWTDSGVHLIFRTE 375
           V+TDSG+H+I RTE
Sbjct: 152 VFTDSGIHIILRTE 165
>sp|P54353|DOD_DROME Dodo protein
          Length = 166

 Score =  141 bits (355), Expect = 6e-34
 Identities = 75/134 (55%), Positives = 86/134 (64%), Gaps = 11/134 (8%)
 Frame = +1

Query: 1   ESQWEFPAVAAENTSS-----------VKCSHLLVKHKESRRASSWREANITRTKEEALE 147
           ESQW+ P   A+               V C HLLVKHK SRR SSWREANITRTKEEA  
Sbjct: 31  ESQWDQPTEPAKKAGGGSAGGGDAPDEVHCLHLLVKHKGSRRPSSWREANITRTKEEAQL 90

Query: 148 LLKSYEEKIRSGECSFASLAEQFSDCSSAKRGGDLGHFKRGQMQKPFEDVGFSLKIGEMS 327
           LL+ Y  KI   E +F  LA  +SDCSSAKRGGDLG F RGQMQ  FED  F L + ++S
Sbjct: 91  LLEVYRNKIVQQEATFDELARSYSDCSSAKRGGDLGKFGRGQMQAAFEDAAFKLNVNQLS 150

Query: 328 GPVWTDSGVHLIFR 369
           G V +DSG+H+I R
Sbjct: 151 GIVDSDSGLHIILR 164
>sp|O74448|PIN1_SCHPO Peptidyl-prolyl cis-trans isomerase pin1
          Length = 175

 Score =  135 bits (341), Expect = 3e-32
 Identities = 68/123 (55%), Positives = 87/123 (70%)
 Frame = +1

Query: 1   ESQWEFPAVAAENTSSVKCSHLLVKHKESRRASSWREANITRTKEEALELLKSYEEKIRS 180
           E Q       A N+  ++ SHLLVKH+ESRR SSW+E +ITR+KEEA +L + YE+ ++S
Sbjct: 51  ELQESVTPTEASNSPKIRASHLLVKHRESRRPSSWKEEHITRSKEEARKLAEHYEQLLKS 110

Query: 181 GECSFASLAEQFSDCSSAKRGGDLGHFKRGQMQKPFEDVGFSLKIGEMSGPVWTDSGVHL 360
           G  S   LA + SDCSSA+RGG+LG F R +MQKPFED  F+LK GE+SG V T SG H+
Sbjct: 111 GSVSMHDLAMKESDCSSARRGGELGEFGRDEMQKPFEDAAFALKPGEISGVVETSSGFHI 170

Query: 361 IFR 369
           I R
Sbjct: 171 IQR 173
>sp|O60045|SSP1_NEUCR Peptidyl-prolyl cis-trans isomerase ssp-1 (PPIase ssp1)
          Length = 186

 Score =  133 bits (334), Expect = 2e-31
 Identities = 65/107 (60%), Positives = 82/107 (76%)
 Frame = +1

Query: 49  VKCSHLLVKHKESRRASSWREANITRTKEEALELLKSYEEKIRSGECSFASLAEQFSDCS 228
           ++C+HLLVKH +SRR SSWRE+ ITRTK+EAL  L+ +E++I+SG  S   LA   SDCS
Sbjct: 72  IRCAHLLVKHNQSRRPSSWRESEITRTKQEALTTLQGFEQRIKSGSISLGELALTESDCS 131

Query: 229 SAKRGGDLGHFKRGQMQKPFEDVGFSLKIGEMSGPVWTDSGVHLIFR 369
           SA++ GDLG+F RG MQK FED  F+LK GE+SG V T SG+HLI R
Sbjct: 132 SARKRGDLGYFGRGDMQKEFEDAAFALKPGEISGIVDTASGLHLIER 178
>sp|Q9SL42|PIN1_ARATH Peptidyl-prolyl cis-trans isomerase 1 (Rotamase Pin1) (PPIase Pin1)
           (PIN1At)
          Length = 119

 Score =  125 bits (314), Expect = 4e-29
 Identities = 63/112 (56%), Positives = 83/112 (74%), Gaps = 4/112 (3%)
 Frame = +1

Query: 49  VKCSHLLVKHKESRRASSWREAN----ITRTKEEALELLKSYEEKIRSGECSFASLAEQF 216
           VK SH+L+KH+ SRR +SW++      +T T+E A+E LKS  E I SG+ +F  +A + 
Sbjct: 7   VKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATRV 66

Query: 217 SDCSSAKRGGDLGHFKRGQMQKPFEDVGFSLKIGEMSGPVWTDSGVHLIFRT 372
           SDCSSAKRGGDLG F RGQMQKPFE+  ++LK+G++S  V TDSGVH+I RT
Sbjct: 67  SDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRT 118
>sp|Q94G00|PIN1_MALDO Peptidyl-prolyl cis-trans isomerase 1 (Rotamase Pin1) (PPIase Pin1)
           (MdPin1)
          Length = 121

 Score =  121 bits (303), Expect = 7e-28
 Identities = 63/114 (55%), Positives = 82/114 (71%), Gaps = 4/114 (3%)
 Frame = +1

Query: 43  SSVKCSHLLVKHKESRRASSWR--EANITR--TKEEALELLKSYEEKIRSGECSFASLAE 210
           + V+ SH+L+KH+ SRR +SW+  E  I R  T++ A+  LK+  + I SG+  F  LA 
Sbjct: 7   NQVRASHILIKHQGSRRKASWKDPEGQIIRNTTRDSAVSQLKALRDDILSGKAKFDDLAA 66

Query: 211 QFSDCSSAKRGGDLGHFKRGQMQKPFEDVGFSLKIGEMSGPVWTDSGVHLIFRT 372
           ++SDCSSAKRGGDLG F R QMQKPFE+  F+LK+GEMS  V TDSGVH+I RT
Sbjct: 67  RYSDCSSAKRGGDLGPFGRNQMQKPFEEATFALKVGEMSDIVDTDSGVHIIKRT 120
>sp|Q9LEK8|PIN1_DIGLA Peptidyl-prolyl cis-trans isomerase 1 (Rotamase Pin1) (PPIase Pin1)
           (DlPar13)
          Length = 118

 Score =  118 bits (295), Expect = 6e-27
 Identities = 59/116 (50%), Positives = 83/116 (71%), Gaps = 4/116 (3%)
 Frame = +1

Query: 37  NTSSVKCSHLLVKHKESRRASSWREAN----ITRTKEEALELLKSYEEKIRSGECSFASL 204
           ++  V+ SH+L+KH+ SRR SSW++ +       T+++A+  L+S  +++ S   SF+ L
Sbjct: 2   SSEKVRASHILIKHQGSRRKSSWKDPDGSLISATTRDDAVSQLQSLRQELLSDPASFSDL 61

Query: 205 AEQFSDCSSAKRGGDLGHFKRGQMQKPFEDVGFSLKIGEMSGPVWTDSGVHLIFRT 372
           A + S CSSAKRGGDLG F RGQMQKPFE+  F+LK+GE+S  V TDSGVH+I RT
Sbjct: 62  ASRHSHCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDTDSGVHIIKRT 117
>sp|P22696|ESS1_YEAST Peptidyl-prolyl cis-trans isomerase ESS1 (PPIase ESS1)
           (Processing/termination factor 1) (Parvulin ESS1)
          Length = 170

 Score =  108 bits (270), Expect = 5e-24
 Identities = 62/133 (46%), Positives = 84/133 (63%), Gaps = 11/133 (8%)
 Frame = +1

Query: 4   SQWEFPAVA---------AENTSSVKCSHLLVKHKESRRASSWREANITRTKEEALELLK 156
           SQWE P             ++   V+C H+L+KHK+SRR +S R  NIT +K++A + LK
Sbjct: 36  SQWEEPEGTNKDQLHKHLRDHPVRVRCLHILIKHKDSRRPASHRSENITISKQDATDELK 95

Query: 157 SYEEKIR--SGECSFASLAEQFSDCSSAKRGGDLGHFKRGQMQKPFEDVGFSLKIGEMSG 330
           +   ++   S   SF +LA++ SDCSS KRGGDLG F RG+MQ  FED  F LK+GE+S 
Sbjct: 96  TLITRLDDDSKTNSFEALAKERSDCSSYKRGGDLGWFGRGEMQPSFEDAAFQLKVGEVSD 155

Query: 331 PVWTDSGVHLIFR 369
            V + SGVH+I R
Sbjct: 156 IVESGSGVHVIKR 168
>sp|P24327|PRSA_BACSU Foldase protein prsA precursor
          Length = 292

 Score = 67.8 bits (164), Expect = 9e-12
 Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
 Frame = +1

Query: 49  VKCSHLLVKHKESRRASSWREANITRTKEEALELLKSYEEKIRSGECSFASLAEQFSDCS 228
           ++ SH+LV  K              +T EE        E+K++ GE  F  LA+++S  S
Sbjct: 137 IRASHILVADK--------------KTAEEV-------EKKLKKGE-KFEDLAKEYSTDS 174

Query: 229 SAKRGGDLGHF-KRGQMQKPFEDVGFSLKIGEMSGPVWTDSGVHLIFRTE 375
           SA +GGDLG F K GQM + F    F LK GE+S PV T  G H+I +TE
Sbjct: 175 SASKGGDLGWFAKEGQMDETFSKAAFKLKTGEVSDPVKTQYGYHIIKKTE 224
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,316,007
Number of Sequences: 369166
Number of extensions: 821913
Number of successful extensions: 2369
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2360
length of database: 68,354,980
effective HSP length: 99
effective length of database: 50,066,215
effective search space used: 2052714815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)