Planaria EST Database


DrC_01604

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01604
         (742 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LX30|GCN2_ARATH  Probable serine/threonine-protein kina...    41   0.004
sp|P43565|RIM15_YEAST  Serine/threonine-protein kinase RIM15       41   0.004
sp|Q9UKI8|TLK1_HUMAN  Serine/threonine-protein kinase tousle...    40   0.005
sp|Q8C0V0|TLK1_MOUSE  Serine/threonine-protein kinase tousle...    40   0.005
sp|P42818|KPK1_ARATH  Serine/threonine-protein kinase AtPK1/...    40   0.007
sp|Q39030|KPK19_ARATH  Serine/threonine-protein kinase AtPK1...    39   0.011
sp|P41719|PK1_NPVHZ  Serine/threonine-protein kinase 1             39   0.011
sp|P32023|KGP25_DROME  cGMP-dependent protein kinase, isozym...    39   0.011
sp|Q03043|KGP24_DROME  cGMP-dependent protein kinase, isozym...    39   0.011
sp|Q86UE8|TLK2_HUMAN  Serine/threonine-protein kinase tousle...    39   0.015
>sp|Q9LX30|GCN2_ARATH Probable serine/threonine-protein kinase GCN2
          Length = 1241

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
 Frame = +1

Query: 157 GNRYYAAPEYINNEKEMFDDKGDYWAVGVIFFHL--IFGCRPYQHIVSDKVKELSDFIIN 330
           G  +Y APE I  +    D+K D +++GV+FF L   FG    +H++   +K   +  + 
Sbjct: 638 GTYFYTAPE-IEQDWPKIDEKADMYSLGVVFFELWHPFGTAMERHVILTNLKLKGELPLK 696

Query: 331 WKTKSFMQKSILKQRCKKYP 390
           W  +   Q S+L++     P
Sbjct: 697 WVNEFPEQASLLRRLMSPSP 716
>sp|P43565|RIM15_YEAST Serine/threonine-protein kinase RIM15
          Length = 1770

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
 Frame = +1

Query: 145  RRMWGNRYYAAPEYINNEKEMFDDKG-DYWAVGVIFFHLIFGCRPYQHIVSDKV-KELSD 318
            ++ +G   Y APE I  + E  D+K  D+W+VG IFF L+ G  P+     D V K++  
Sbjct: 1145 KKFFGTPDYLAPETIEGKGE--DNKQCDWWSVGCIFFELLLGYPPFHAETPDAVFKKILS 1202

Query: 319  FIINW 333
             +I W
Sbjct: 1203 GVIQW 1207
>sp|Q9UKI8|TLK1_HUMAN Serine/threonine-protein kinase tousled-like 1 (Tousled-like kinase
           1) (PKU-beta)
          Length = 766

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = +1

Query: 157 GNRYYAAPE--YINNEKEMFDDKGDYWAVGVIFFHLIFGCRPYQHIVSDKVKELSDFIIN 330
           G  +Y  PE   +  E     +K D W+VGVIFF  ++G +P+ H  S +     + I+ 
Sbjct: 632 GTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFFQCLYGRKPFGHNQSQQDILQENTILK 691

Query: 331 WKTKSFMQKSILKQRCKKY 387
                F  K ++    K +
Sbjct: 692 ATEVQFPVKPVVSSEAKAF 710
>sp|Q8C0V0|TLK1_MOUSE Serine/threonine-protein kinase tousled-like 1 (Tousled-like kinase
           1)
          Length = 766

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = +1

Query: 157 GNRYYAAPE--YINNEKEMFDDKGDYWAVGVIFFHLIFGCRPYQHIVSDKVKELSDFIIN 330
           G  +Y  PE   +  E     +K D W+VGVIFF  ++G +P+ H  S +     + I+ 
Sbjct: 632 GTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFFQCLYGRKPFGHNQSQQDILQENTILK 691

Query: 331 WKTKSFMQKSILKQRCKKY 387
                F  K ++    K +
Sbjct: 692 ATEVQFPVKPVVSSEAKAF 710
>sp|P42818|KPK1_ARATH Serine/threonine-protein kinase AtPK1/AtPK6
          Length = 465

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 37/128 (28%), Positives = 53/128 (41%), Gaps = 8/128 (6%)
 Frame = +1

Query: 34  DFGLAKRKCSFYELKEKCSYSSNCSSAHLLEPYLSTPRRMWGNRYYAAPEYINNEKEMFD 213
           DFGLAK      E +E    +S C                 G   Y APE +  +    D
Sbjct: 275 DFGLAK------EFEENTRSNSMC-----------------GTTEYMAPEIVRGKGH--D 309

Query: 214 DKGDYWAVGVIFFHLIFGCRPY--------QHIVSDKVKELSDFIINWKTKSFMQKSILK 369
              D+W+VG++ + ++ G  P+        Q IV DK+K L  F+ N         +ILK
Sbjct: 310 KAADWWSVGILLYEMLTGKPPFLGSKGKIQQKIVKDKIK-LPQFLSN------EAHAILK 362

Query: 370 QRCKKYPE 393
              +K PE
Sbjct: 363 GLLQKEPE 370
>sp|Q39030|KPK19_ARATH Serine/threonine-protein kinase AtPK19 (Ribosomal-protein S6 kinase
           homolog)
          Length = 471

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 8/128 (6%)
 Frame = +1

Query: 34  DFGLAKRKCSFYELKEKCSYSSNCSSAHLLEPYLSTPRRMWGNRYYAAPEYINNEKEMFD 213
           DFGLAK      E +E    +S C                 G   Y APE +  +    D
Sbjct: 281 DFGLAK------EFEENTRSNSMC-----------------GTTEYMAPEIVRGKGH--D 315

Query: 214 DKGDYWAVGVIFFHLIFGCRPY--------QHIVSDKVKELSDFIINWKTKSFMQKSILK 369
              D+W+VG++ + ++ G  P+        Q IV DK+K L  F+ N         ++LK
Sbjct: 316 KAADWWSVGILLYEMLTGKPPFLGSKGKIQQKIVKDKIK-LPQFLSN------EAHALLK 368

Query: 370 QRCKKYPE 393
              +K PE
Sbjct: 369 GLLQKEPE 376
>sp|P41719|PK1_NPVHZ Serine/threonine-protein kinase 1
          Length = 267

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 19/84 (22%), Positives = 44/84 (52%)
 Frame = +1

Query: 157 GNRYYAAPEYINNEKEMFDDKGDYWAVGVIFFHLIFGCRPYQHIVSDKVKELSDFIINWK 336
           G + Y +PE +  +++ +D   D+WA+G++ + L+ G  PY+H   ++     D +   +
Sbjct: 167 GTKEYMSPEKL--KRQNYDVHVDWWALGILTYELLIGHHPYKHSNDNEEDFDLDVLQQRQ 224

Query: 337 TKSFMQKSILKQRCKKYPELITVF 408
            K   + + L    +K+ E + ++
Sbjct: 225 QKKLHKYNFLSSDAQKFLEAMLMY 248
>sp|P32023|KGP25_DROME cGMP-dependent protein kinase, isozyme 2 forms cD5/T2 (CGK)
           (Foraging protein)
          Length = 934

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = +1

Query: 133 LSTPRRMW---GNRYYAAPEYINNEKEMFDDKGDYWAVGVIFFHLIFGCRPY 279
           L T R+ W   G   Y APE I N     D   DYW++GV+ F L+ G  P+
Sbjct: 772 LQTGRKTWTFCGTPEYVAPEVILNRGH--DISADYWSLGVLMFELLTGTPPF 821
>sp|Q03043|KGP24_DROME cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B (CGK)
            (Foraging protein)
          Length = 1088

 Score = 39.3 bits (90), Expect = 0.011
 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = +1

Query: 133  LSTPRRMW---GNRYYAAPEYINNEKEMFDDKGDYWAVGVIFFHLIFGCRPY 279
            L T R+ W   G   Y APE I N     D   DYW++GV+ F L+ G  P+
Sbjct: 926  LQTGRKTWTFCGTPEYVAPEVILNRGH--DISADYWSLGVLMFELLTGTPPF 975
>sp|Q86UE8|TLK2_HUMAN Serine/threonine-protein kinase tousled-like 2 (Tousled-like kinase
           2) (PKU-alpha)
          Length = 772

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = +1

Query: 157 GNRYYAAPE--YINNEKEMFDDKGDYWAVGVIFFHLIFGCRPYQHIVSDKVKELSDFIIN 330
           G  +Y  PE   +  E     +K D W+VGVIF+  ++G +P+ H  S +     + I+ 
Sbjct: 639 GTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILK 698

Query: 331 WKTKSFMQKSILKQRCKKY 387
                F  K ++    K +
Sbjct: 699 ATEVQFPPKPVVTPEAKAF 717
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,075,487
Number of Sequences: 369166
Number of extensions: 1685757
Number of successful extensions: 4617
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4604
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6679696800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)