Planaria EST Database


DrC_01588

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01588
         (888 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P04931|ARP_PLAFA  Asparagine-rich protein (AG319) (ARP)         39   0.025
sp|Q8KA50|PT1_BUCAP  Phosphoenolpyruvate-protein phosphotran...    39   0.025
sp|Q9WXI6|PT1_BUCAI  Phosphoenolpyruvate-protein phosphotran...    39   0.025
sp|P54677|PI4K_DICDI  Phosphatidylinositol 4-kinase (PI4-kin...    38   0.033
sp|Q03101|CYAG_DICDI  Adenylate cyclase, germination specifi...    38   0.043
sp|Q9VS50|ECO_DROME  N-acetyltransferase eco (Establishment ...    36   0.16 
sp|Q9TU23|CE290_BOVIN  Centrosomal protein Cep290                  36   0.16 
sp|P22545|PVDA_PLAKN  DUFFY RECEPTOR, ALPHA FORM preCURSOR (...    36   0.16 
sp|P78022|RPOD_MYCPN  RNA polymerase sigma factor rpoD (Sigm...    35   0.21 
sp|Q03661|YM67_YEAST  Hypothetical 187.1 kDa protein in GUA1...    35   0.21 
>sp|P04931|ARP_PLAFA Asparagine-rich protein (AG319) (ARP)
          Length = 537

 Score = 38.5 bits (88), Expect = 0.025
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
 Frame = +1

Query: 250 NKKNLESIKQDSTDFHSSNDLQDISLNILENTTKVIENEKEVDEY---IGINNQISGNSK 420
           N+ N E    D+     +N++ +   +  +NT  V  N    D +   +G NN    N+ 
Sbjct: 347 NQMNFEQTNNDNMK-RENNNMNNYGYD--DNTVHVNNNTPSTDFFSRAVGYNNNYLNNNN 403

Query: 421 EISKSESVRLKHDYVDSNKSPLKHQVSCPTSHISTNVHSVPNNEKSNRGINVNKCIENN 597
            ++ + +         SN + +K++ S    +++ N  S+ NN+ +N  IN+N+ I NN
Sbjct: 404 NMNSAVNNN------SSNGNNMKNENS-ENKNVADNNDSLNNNKNNNNNINMNESINNN 455
>sp|Q8KA50|PT1_BUCAP Phosphoenolpyruvate-protein phosphotransferase (Phosphotransferase
           system, enzyme I)
          Length = 570

 Score = 38.5 bits (88), Expect = 0.025
 Identities = 33/123 (26%), Positives = 60/123 (48%)
 Frame = +1

Query: 256 KNLESIKQDSTDFHSSNDLQDISLNILENTTKVIENEKEVDEYIGINNQISGNSKEISKS 435
           K LE IK +    + + D++DI   +L+N   +      + +   I NQ+   SK+++ S
Sbjct: 113 KALEKIKDEYLK-NRAIDVRDIGSRLLKNILNI-----SIVDLNNIKNQVILISKDLTPS 166

Query: 436 ESVRLKHDYVDSNKSPLKHQVSCPTSHISTNVHSVPNNEKSNRGINVNKCIENNEFRISE 615
           E+ ++   Y+    + L      PTSH S    S+         +N+ K ++NN+F I +
Sbjct: 167 ETAQINLKYILGFITDL----GGPTSHTSIMARSLEIPAIVGT-VNITKKVKNNDFIILD 221

Query: 616 SVN 624
           S+N
Sbjct: 222 SLN 224
>sp|Q9WXI6|PT1_BUCAI Phosphoenolpyruvate-protein phosphotransferase (Phosphotransferase
           system, enzyme I)
          Length = 571

 Score = 38.5 bits (88), Expect = 0.025
 Identities = 36/142 (25%), Positives = 67/142 (47%)
 Frame = +1

Query: 256 KNLESIKQDSTDFHSSNDLQDISLNILENTTKVIENEKEVDEYIGINNQISGNSKEISKS 435
           K LE +K +    + + D++DI   +L+N   +      + +   INN++   +K+++ S
Sbjct: 113 KALEKLKDEYLK-NRAIDVRDIGNRLLKNILNL-----NIIDLNNINNEVILIAKDLTPS 166

Query: 436 ESVRLKHDYVDSNKSPLKHQVSCPTSHISTNVHSVPNNEKSNRGINVNKCIENNEFRISE 615
           E+ ++   Y+    + L  +    TSH S    S+        G N+ K ++NN+F I +
Sbjct: 167 ETAQINLKYILGFITDLGSR----TSHTSIMARSLEIPAIVGTG-NITKIVKNNDFIILD 221

Query: 616 SVNKFPLKNSDAHSILSTDFKK 681
           S+N   L N     I  T+  K
Sbjct: 222 SINNQILINPSHKLINQTEVIK 243
>sp|P54677|PI4K_DICDI Phosphatidylinositol 4-kinase (PI4-kinase) (PtdIns-4-kinase)
           (PI4K-alpha)
          Length = 1093

 Score = 38.1 bits (87), Expect = 0.033
 Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
 Frame = +1

Query: 241 EVENKKNLESIKQDSTDFHSSNDLQDISLNILENTTKVIENEKEVDEYIGINNQI--SGN 414
           E + KK++ S   ++ + +++N   D +     N  +++ NE   +     NNQ   S N
Sbjct: 176 ENDPKKDINSNNNNNNNINNNNSNNDDN-----NNNEILPNENSDNSINDENNQYGNSNN 230

Query: 415 SKEISKSESVRLKHDYVDSNKSPLKHQVSCPTSHISTNVHSVPNNEKSNRGINVNKCIEN 594
           +  IS  E+  +K D    NKS    +    T    T    + ++ ++N   N N    N
Sbjct: 231 NNNIS-GENNNIKIDINSQNKSDSNIETLNSTLCEETKTSPIKDDMENNNNNNNNNNNNN 289

Query: 595 NEFRISESVNKFPLKNSDAHSILSTDFKKDSGSFVAKPVYGIGNKIKTSESD 750
           N    + ++N   + N++ ++  + ++   +GS     + GIG    +  +D
Sbjct: 290 NNNNNNNNINNNNINNNNINNNNNINYGHINGSL--STLDGIGQPYISQPND 339
>sp|Q03101|CYAG_DICDI Adenylate cyclase, germination specific (ATP pyrophosphate-lyase)
            (Adenylyl cyclase)
          Length = 858

 Score = 37.7 bits (86), Expect = 0.043
 Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
 Frame = +1

Query: 250  NKKNLESIKQDSTDFHSSNDLQDISLNILENTTKVIENEK---EVDEYIGINNQISGNSK 420
            N  N+     ++T+F+++N+  DI++N  +N      N     +++   G NN I+ N+ 
Sbjct: 741  NNNNINDNNINNTNFNNNNN--DININNSDNVNNYENNNNFSDKIENNDGDNNNINDNNY 798

Query: 421  EISKSESVRLKHDYVDSNKSPLKHQVSCPTSHISTNVHSVPNNEKSNRGINVNKCIENNE 600
            + +   +++ K  + DS             + I     +  NN+ +N   N N    NN+
Sbjct: 799  KSTNENNIKSKTLFKDSKSL---------INDIKMAKENCDNNDDNNNNNNNNNNNNNND 849

Query: 601  FRISESVNK 627
              +    NK
Sbjct: 850  ENVESKKNK 858

 Score = 33.9 bits (76), Expect = 0.62
 Identities = 38/187 (20%), Positives = 79/187 (42%), Gaps = 14/187 (7%)
 Frame = +1

Query: 280  DSTDFHSSNDLQDISLNILENTTKVIENEKEVDEYIGINN------QISGNSKEISKSES 441
            D +++H      D ++   + +  + E+E E +E +  N       QI    +++S ++S
Sbjct: 671  DGSEYHDDPFPSDSNVGYHDTSKDIKEDENEQNETLLFNQEQLKKKQIENIQRDLSLNDS 730

Query: 442  VRLKHDYVDSNKSPLKHQVSCPTSHISTNVHSVPNNEKSNRGINVNKCIENNEFR----- 606
            +       ++N + +        +  +TN ++  N+   N   NVN    NN F      
Sbjct: 731  IEAIKILNNNNNNNINDN-----NINNTNFNNNNNDININNSDNVNNYENNNNFSDKIEN 785

Query: 607  ---ISESVNKFPLKNSDAHSILSTDFKKDSGSFVAKPVYGIGNKIKTSESDESLKNKQLD 777
                + ++N    K+++ ++I S    KDS S +        N IK ++  E+  N   +
Sbjct: 786  NDGDNNNINDNNYKSTNENNIKSKTLFKDSKSLI--------NDIKMAK--ENCDNNDDN 835

Query: 778  NGRGSSN 798
            N   ++N
Sbjct: 836  NNNNNNN 842
>sp|Q9VS50|ECO_DROME N-acetyltransferase eco (Establishment of cohesion 1 homolog) (ECO1
           homolog)
          Length = 1052

 Score = 35.8 bits (81), Expect = 0.16
 Identities = 36/158 (22%), Positives = 63/158 (39%), Gaps = 1/158 (0%)
 Frame = +1

Query: 391 INNQISGNSKEISKSESVRLKHDYVDSN-KSPLKHQVSCPTSHISTNVHSVPNNEKSNRG 567
           +N+  S NS+  S     R++    DS+  SP       P+S    ++   P    + + 
Sbjct: 113 LNSNSSSNSRN-SSPRQTRVQRKRADSSMSSPTSSSEGTPSSRARNSIRRSPRTFSAQKD 171

Query: 568 INVNKCIENNEFRISESVNKFPLKNSDAHSILSTDFKKDSGSFVAKPVYGIGNKIKTSES 747
            +     E+ + R+S+ V    +K  D+ S+L    KK + S             KTS +
Sbjct: 172 PDAFSSPESFQTRLSK-VAAMLMKGQDSRSMLEKSKKKHNHSLKTTAQVHTTKPKKTSPA 230

Query: 748 DESLKNKQLDNGRGSSNQMEIVTEHTEDIPISKSILNR 861
           +ES  + +  +   +S +   V E      IS    NR
Sbjct: 231 EESQSDDEKPSSSKNSRKNTEVRETRSSQIISPKTRNR 268
>sp|Q9TU23|CE290_BOVIN Centrosomal protein Cep290
          Length = 1453

 Score = 35.8 bits (81), Expect = 0.16
 Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 8/174 (4%)
 Frame = +1

Query: 277  QDSTDFHSS---NDLQDISLNILE-----NTTKVIENEKEVDEYIGINNQISGNSKEISK 432
            Q   D H+    + ++D++ NIL+      T+K  EN    D    + N++    K   K
Sbjct: 856  QQIVDRHTKELKSQIEDLNENILKLKEALKTSKNRENTL-TDNLNDLTNELQNKQKAYGK 914

Query: 433  SESVRLKHDYVDSNKSPLKHQVSCPTSHISTNVHSVPNNEKSNRGINVNKCIENNEFRIS 612
               V  + D VD   + LK Q+   TS +         + K +    + K I+  E ++ 
Sbjct: 915  ---VLREKDAVDQENNELKRQIKRLTSGLQGKPLI---DNKQSLIEELQKKIKKLESQLE 968

Query: 613  ESVNKFPLKNSDAHSILSTDFKKDSGSFVAKPVYGIGNKIKTSESDESLKNKQL 774
              V++  +K     S      + + G      + GI NK+K  E +  +  KQL
Sbjct: 969  RKVDEAEMKPMKEKSAREEVIRWEEGKKWQTKIEGIRNKLKEKEGEVYILTKQL 1022
>sp|P22545|PVDA_PLAKN DUFFY RECEPTOR, ALPHA FORM preCURSOR (ERYTHROCYTE BINDING PROTEIN)
          Length = 1073

 Score = 35.8 bits (81), Expect = 0.16
 Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 6/154 (3%)
 Frame = +1

Query: 223  DLGGVKEVENKKNLESIKQDSTDFHSSNDLQDISLNILENTTKVIEN-----EKEVDEYI 387
            D G V    NK+N  +      +   SN+        ++NTT  +EN     EK+  ++ 
Sbjct: 752  DNGNVPGSGNKQNEGATALSGAESLKSNESVH---KTIDNTTHGLENKNGGNEKDFQKHD 808

Query: 388  GINNQISGNSKEISKSESVRLKHDYVDSNKSPLKHQVSCPTSHISTNVHSVPNNEKSNRG 567
             +NN +  +      + S +   D+  S+++   H  S  TS   T+     +++  +  
Sbjct: 809  FMNNDMLNDQASSDHTSSDQTSSDHTSSDQTSSDHTSSDHTSSDQTSSDQTSSDQTIDTE 868

Query: 568  INVNKCIENNEFRISESVNKFP-LKNSDAHSILS 666
             +    + N E + SE ++K   ++NS+++ + S
Sbjct: 869  GHHRDNVRNPEIKSSEDMSKGDFMRNSNSNELYS 902
>sp|P78022|RPOD_MYCPN RNA polymerase sigma factor rpoD (Sigma-A)
          Length = 499

 Score = 35.4 bits (80), Expect = 0.21
 Identities = 39/202 (19%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
 Frame = +1

Query: 271 IKQDSTDFHSSNDLQDISLNILENTTKVIENEKEVDEYIGINNQISGNSKEISKSESVRL 450
           +++   +F ++ DL  I  +I E TTK I N  +VD+ +        +SK +      R+
Sbjct: 174 VEEHIHEFRANQDLSIIDEDIEELTTKNISNRDKVDDNVRFFLGSLDSSKMLDFESEQRI 233

Query: 451 KHDYVDSNKSPLKHQVSCPTSHISTNVHSVPNNEKSN--RGINVNKCIENNEFRISESVN 624
                 +++   K+ ++     +++N+  V +  K +  RG++ N  I+     + ++++
Sbjct: 234 AKVLNSTDEESRKYAIN---QLVTSNLRLVVSIAKKHLERGLDFNDLIQEGNLGLLKAIS 290

Query: 625 KFPLKNSDAHSILSTDFKK--------DSGSFVAKPVYGIGNKIKTSESDESLKNKQLDN 780
           KF     +  S  +T + K        D    V  PV+ +    + ++++ +L N++L  
Sbjct: 291 KFNWSLGNKFSTYATWWIKQAITRAIADQARTVRIPVHMVETINRLAKAERAL-NQELGR 349

Query: 781 GRGSSNQMEIVTEHTEDIPISK 846
              +    E +    E   + K
Sbjct: 350 EPTAEELAEKMGGQAEGFTVKK 371
>sp|Q03661|YM67_YEAST Hypothetical 187.1 kDa protein in GUA1-ERG8 intergenic region
          Length = 1658

 Score = 35.4 bits (80), Expect = 0.21
 Identities = 64/300 (21%), Positives = 124/300 (41%), Gaps = 29/300 (9%)
 Frame = +1

Query: 28   NIESSEFQSDTDDNSEITSLNENSVKMRPKRLSLVMAPSKSDXXXXXXXXXXXXXXXXXX 207
            +IESS+ +S +   SE  S ++   KM+ ++ +     + S+                  
Sbjct: 402  DIESSDSESQSAQESEQGSEDDFEYKMKNEKSTSEETENTSESRD--------------- 446

Query: 208  XTQGI--DLGGVKEVENKKNLESIKQDST-------DFHSSNDLQDISLNILENTT--KV 354
              QG   D     +VE ++N E  ++D         +FH +N+  + S N+LEN T   +
Sbjct: 447  --QGFAKDAYTKNKVEQQENDEEPEKDDIIRSSLDKNFHGNNNKSEYSENVLENETDPAI 504

Query: 355  IENEKEVDEYIGINNQISGNSKEISKSESVRLKHDYVDSNKSPLKHQVS----CPTSHIS 522
            +E E ++++  G +  ++G S E    E     + Y  + ++ L+ Q S    CP     
Sbjct: 505  VERENQINDVEGYD--VTGKSVESDLHEH-SPDNLYDLAARAMLQFQQSRNSNCPQKEEQ 561

Query: 523  TNVHSVPNNEKSNRGINVNKCIENNEFRISESVNKFPLKN--SDAHSILSTDFKKDSGSF 696
             +   + ++  SN           +   + ES  + PLK+   + ++ L TD + D  S 
Sbjct: 562  VSESYLGHSNGSNL----------SGRSLDESEEQIPLKDFTGENNNNLKTD-RGDLSSS 610

Query: 697  VAKPVYGIGNK---------IKTSESDESLKNKQLDNGRG---SSNQMEIVTEHTEDIPI 840
            V   V  +  K         +    +D ++ N  L N      S +  + ++E+  D+P+
Sbjct: 611  VEIEVEKVSEKKLDGSTEKELVPLSTDTTINNSSLGNEDSIYYSLDDADAISENLTDVPL 670
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.303    0.122    0.322 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,124,307
Number of Sequences: 369166
Number of extensions: 1428098
Number of successful extensions: 2725
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2698
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8886314050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)