Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dr_sW_007_H15 (888 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P04931|ARP_PLAFA Asparagine-rich protein (AG319) (ARP) 39 0.025 sp|Q8KA50|PT1_BUCAP Phosphoenolpyruvate-protein phosphotran... 39 0.025 sp|Q9WXI6|PT1_BUCAI Phosphoenolpyruvate-protein phosphotran... 39 0.025 sp|P54677|PI4K_DICDI Phosphatidylinositol 4-kinase (PI4-kin... 38 0.033 sp|Q03101|CYAG_DICDI Adenylate cyclase, germination specifi... 38 0.043 sp|Q9VS50|ECO_DROME N-acetyltransferase eco (Establishment ... 36 0.16 sp|Q9TU23|CE290_BOVIN Centrosomal protein Cep290 36 0.16 sp|P22545|PVDA_PLAKN DUFFY RECEPTOR, ALPHA FORM preCURSOR (... 36 0.16 sp|P78022|RPOD_MYCPN RNA polymerase sigma factor rpoD (Sigm... 35 0.21 sp|Q03661|YM67_YEAST Hypothetical 187.1 kDa protein in GUA1... 35 0.21
>sp|P04931|ARP_PLAFA Asparagine-rich protein (AG319) (ARP) Length = 537 Score = 38.5 bits (88), Expect = 0.025 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 3/119 (2%) Frame = +1 Query: 250 NKKNLESIKQDSTDFHSSNDLQDISLNILENTTKVIENEKEVDEY---IGINNQISGNSK 420 N+ N E D+ +N++ + + +NT V N D + +G NN N+ Sbjct: 347 NQMNFEQTNNDNMK-RENNNMNNYGYD--DNTVHVNNNTPSTDFFSRAVGYNNNYLNNNN 403 Query: 421 EISKSESVRLKHDYVDSNKSPLKHQVSCPTSHISTNVHSVPNNEKSNRGINVNKCIENN 597 ++ + + SN + +K++ S +++ N S+ NN+ +N IN+N+ I NN Sbjct: 404 NMNSAVNNN------SSNGNNMKNENS-ENKNVADNNDSLNNNKNNNNNINMNESINNN 455
>sp|Q8KA50|PT1_BUCAP Phosphoenolpyruvate-protein phosphotransferase (Phosphotransferase system, enzyme I) Length = 570 Score = 38.5 bits (88), Expect = 0.025 Identities = 33/123 (26%), Positives = 60/123 (48%) Frame = +1 Query: 256 KNLESIKQDSTDFHSSNDLQDISLNILENTTKVIENEKEVDEYIGINNQISGNSKEISKS 435 K LE IK + + + D++DI +L+N + + + I NQ+ SK+++ S Sbjct: 113 KALEKIKDEYLK-NRAIDVRDIGSRLLKNILNI-----SIVDLNNIKNQVILISKDLTPS 166 Query: 436 ESVRLKHDYVDSNKSPLKHQVSCPTSHISTNVHSVPNNEKSNRGINVNKCIENNEFRISE 615 E+ ++ Y+ + L PTSH S S+ +N+ K ++NN+F I + Sbjct: 167 ETAQINLKYILGFITDL----GGPTSHTSIMARSLEIPAIVGT-VNITKKVKNNDFIILD 221 Query: 616 SVN 624 S+N Sbjct: 222 SLN 224
>sp|Q9WXI6|PT1_BUCAI Phosphoenolpyruvate-protein phosphotransferase (Phosphotransferase system, enzyme I) Length = 571 Score = 38.5 bits (88), Expect = 0.025 Identities = 36/142 (25%), Positives = 67/142 (47%) Frame = +1 Query: 256 KNLESIKQDSTDFHSSNDLQDISLNILENTTKVIENEKEVDEYIGINNQISGNSKEISKS 435 K LE +K + + + D++DI +L+N + + + INN++ +K+++ S Sbjct: 113 KALEKLKDEYLK-NRAIDVRDIGNRLLKNILNL-----NIIDLNNINNEVILIAKDLTPS 166 Query: 436 ESVRLKHDYVDSNKSPLKHQVSCPTSHISTNVHSVPNNEKSNRGINVNKCIENNEFRISE 615 E+ ++ Y+ + L + TSH S S+ G N+ K ++NN+F I + Sbjct: 167 ETAQINLKYILGFITDLGSR----TSHTSIMARSLEIPAIVGTG-NITKIVKNNDFIILD 221 Query: 616 SVNKFPLKNSDAHSILSTDFKK 681 S+N L N I T+ K Sbjct: 222 SINNQILINPSHKLINQTEVIK 243
>sp|P54677|PI4K_DICDI Phosphatidylinositol 4-kinase (PI4-kinase) (PtdIns-4-kinase) (PI4K-alpha) Length = 1093 Score = 38.1 bits (87), Expect = 0.033 Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 2/172 (1%) Frame = +1 Query: 241 EVENKKNLESIKQDSTDFHSSNDLQDISLNILENTTKVIENEKEVDEYIGINNQI--SGN 414 E + KK++ S ++ + +++N D + N +++ NE + NNQ S N Sbjct: 176 ENDPKKDINSNNNNNNNINNNNSNNDDN-----NNNEILPNENSDNSINDENNQYGNSNN 230 Query: 415 SKEISKSESVRLKHDYVDSNKSPLKHQVSCPTSHISTNVHSVPNNEKSNRGINVNKCIEN 594 + IS E+ +K D NKS + T T + ++ ++N N N N Sbjct: 231 NNNIS-GENNNIKIDINSQNKSDSNIETLNSTLCEETKTSPIKDDMENNNNNNNNNNNNN 289 Query: 595 NEFRISESVNKFPLKNSDAHSILSTDFKKDSGSFVAKPVYGIGNKIKTSESD 750 N + ++N + N++ ++ + ++ +GS + GIG + +D Sbjct: 290 NNNNNNNNINNNNINNNNINNNNNINYGHINGSL--STLDGIGQPYISQPND 339
>sp|Q03101|CYAG_DICDI Adenylate cyclase, germination specific (ATP pyrophosphate-lyase) (Adenylyl cyclase) Length = 858 Score = 37.7 bits (86), Expect = 0.043 Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 3/129 (2%) Frame = +1 Query: 250 NKKNLESIKQDSTDFHSSNDLQDISLNILENTTKVIENEK---EVDEYIGINNQISGNSK 420 N N+ ++T+F+++N+ DI++N +N N +++ G NN I+ N+ Sbjct: 741 NNNNINDNNINNTNFNNNNN--DININNSDNVNNYENNNNFSDKIENNDGDNNNINDNNY 798 Query: 421 EISKSESVRLKHDYVDSNKSPLKHQVSCPTSHISTNVHSVPNNEKSNRGINVNKCIENNE 600 + + +++ K + DS + I + NN+ +N N N NN+ Sbjct: 799 KSTNENNIKSKTLFKDSKSL---------INDIKMAKENCDNNDDNNNNNNNNNNNNNND 849 Query: 601 FRISESVNK 627 + NK Sbjct: 850 ENVESKKNK 858
Score = 33.9 bits (76), Expect = 0.62 Identities = 38/187 (20%), Positives = 79/187 (42%), Gaps = 14/187 (7%) Frame = +1 Query: 280 DSTDFHSSNDLQDISLNILENTTKVIENEKEVDEYIGINN------QISGNSKEISKSES 441 D +++H D ++ + + + E+E E +E + N QI +++S ++S Sbjct: 671 DGSEYHDDPFPSDSNVGYHDTSKDIKEDENEQNETLLFNQEQLKKKQIENIQRDLSLNDS 730 Query: 442 VRLKHDYVDSNKSPLKHQVSCPTSHISTNVHSVPNNEKSNRGINVNKCIENNEFR----- 606 + ++N + + + +TN ++ N+ N NVN NN F Sbjct: 731 IEAIKILNNNNNNNINDN-----NINNTNFNNNNNDININNSDNVNNYENNNNFSDKIEN 785 Query: 607 ---ISESVNKFPLKNSDAHSILSTDFKKDSGSFVAKPVYGIGNKIKTSESDESLKNKQLD 777 + ++N K+++ ++I S KDS S + N IK ++ E+ N + Sbjct: 786 NDGDNNNINDNNYKSTNENNIKSKTLFKDSKSLI--------NDIKMAK--ENCDNNDDN 835 Query: 778 NGRGSSN 798 N ++N Sbjct: 836 NNNNNNN 842
>sp|Q9VS50|ECO_DROME N-acetyltransferase eco (Establishment of cohesion 1 homolog) (ECO1 homolog) Length = 1052 Score = 35.8 bits (81), Expect = 0.16 Identities = 36/158 (22%), Positives = 63/158 (39%), Gaps = 1/158 (0%) Frame = +1 Query: 391 INNQISGNSKEISKSESVRLKHDYVDSN-KSPLKHQVSCPTSHISTNVHSVPNNEKSNRG 567 +N+ S NS+ S R++ DS+ SP P+S ++ P + + Sbjct: 113 LNSNSSSNSRN-SSPRQTRVQRKRADSSMSSPTSSSEGTPSSRARNSIRRSPRTFSAQKD 171 Query: 568 INVNKCIENNEFRISESVNKFPLKNSDAHSILSTDFKKDSGSFVAKPVYGIGNKIKTSES 747 + E+ + R+S+ V +K D+ S+L KK + S KTS + Sbjct: 172 PDAFSSPESFQTRLSK-VAAMLMKGQDSRSMLEKSKKKHNHSLKTTAQVHTTKPKKTSPA 230 Query: 748 DESLKNKQLDNGRGSSNQMEIVTEHTEDIPISKSILNR 861 +ES + + + +S + V E IS NR Sbjct: 231 EESQSDDEKPSSSKNSRKNTEVRETRSSQIISPKTRNR 268
>sp|Q9TU23|CE290_BOVIN Centrosomal protein Cep290 Length = 1453 Score = 35.8 bits (81), Expect = 0.16 Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 8/174 (4%) Frame = +1 Query: 277 QDSTDFHSS---NDLQDISLNILE-----NTTKVIENEKEVDEYIGINNQISGNSKEISK 432 Q D H+ + ++D++ NIL+ T+K EN D + N++ K K Sbjct: 856 QQIVDRHTKELKSQIEDLNENILKLKEALKTSKNRENTL-TDNLNDLTNELQNKQKAYGK 914 Query: 433 SESVRLKHDYVDSNKSPLKHQVSCPTSHISTNVHSVPNNEKSNRGINVNKCIENNEFRIS 612 V + D VD + LK Q+ TS + + K + + K I+ E ++ Sbjct: 915 ---VLREKDAVDQENNELKRQIKRLTSGLQGKPLI---DNKQSLIEELQKKIKKLESQLE 968 Query: 613 ESVNKFPLKNSDAHSILSTDFKKDSGSFVAKPVYGIGNKIKTSESDESLKNKQL 774 V++ +K S + + G + GI NK+K E + + KQL Sbjct: 969 RKVDEAEMKPMKEKSAREEVIRWEEGKKWQTKIEGIRNKLKEKEGEVYILTKQL 1022
>sp|P22545|PVDA_PLAKN DUFFY RECEPTOR, ALPHA FORM preCURSOR (ERYTHROCYTE BINDING PROTEIN) Length = 1073 Score = 35.8 bits (81), Expect = 0.16 Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 6/154 (3%) Frame = +1 Query: 223 DLGGVKEVENKKNLESIKQDSTDFHSSNDLQDISLNILENTTKVIEN-----EKEVDEYI 387 D G V NK+N + + SN+ ++NTT +EN EK+ ++ Sbjct: 752 DNGNVPGSGNKQNEGATALSGAESLKSNESVH---KTIDNTTHGLENKNGGNEKDFQKHD 808 Query: 388 GINNQISGNSKEISKSESVRLKHDYVDSNKSPLKHQVSCPTSHISTNVHSVPNNEKSNRG 567 +NN + + + S + D+ S+++ H S TS T+ +++ + Sbjct: 809 FMNNDMLNDQASSDHTSSDQTSSDHTSSDQTSSDHTSSDHTSSDQTSSDQTSSDQTIDTE 868 Query: 568 INVNKCIENNEFRISESVNKFP-LKNSDAHSILS 666 + + N E + SE ++K ++NS+++ + S Sbjct: 869 GHHRDNVRNPEIKSSEDMSKGDFMRNSNSNELYS 902
>sp|P78022|RPOD_MYCPN RNA polymerase sigma factor rpoD (Sigma-A) Length = 499 Score = 35.4 bits (80), Expect = 0.21 Identities = 39/202 (19%), Positives = 88/202 (43%), Gaps = 10/202 (4%) Frame = +1 Query: 271 IKQDSTDFHSSNDLQDISLNILENTTKVIENEKEVDEYIGINNQISGNSKEISKSESVRL 450 +++ +F ++ DL I +I E TTK I N +VD+ + +SK + R+ Sbjct: 174 VEEHIHEFRANQDLSIIDEDIEELTTKNISNRDKVDDNVRFFLGSLDSSKMLDFESEQRI 233 Query: 451 KHDYVDSNKSPLKHQVSCPTSHISTNVHSVPNNEKSN--RGINVNKCIENNEFRISESVN 624 +++ K+ ++ +++N+ V + K + RG++ N I+ + ++++ Sbjct: 234 AKVLNSTDEESRKYAIN---QLVTSNLRLVVSIAKKHLERGLDFNDLIQEGNLGLLKAIS 290 Query: 625 KFPLKNSDAHSILSTDFKK--------DSGSFVAKPVYGIGNKIKTSESDESLKNKQLDN 780 KF + S +T + K D V PV+ + + ++++ +L N++L Sbjct: 291 KFNWSLGNKFSTYATWWIKQAITRAIADQARTVRIPVHMVETINRLAKAERAL-NQELGR 349 Query: 781 GRGSSNQMEIVTEHTEDIPISK 846 + E + E + K Sbjct: 350 EPTAEELAEKMGGQAEGFTVKK 371
>sp|Q03661|YM67_YEAST Hypothetical 187.1 kDa protein in GUA1-ERG8 intergenic region Length = 1658 Score = 35.4 bits (80), Expect = 0.21 Identities = 64/300 (21%), Positives = 124/300 (41%), Gaps = 29/300 (9%) Frame = +1 Query: 28 NIESSEFQSDTDDNSEITSLNENSVKMRPKRLSLVMAPSKSDXXXXXXXXXXXXXXXXXX 207 +IESS+ +S + SE S ++ KM+ ++ + + S+ Sbjct: 402 DIESSDSESQSAQESEQGSEDDFEYKMKNEKSTSEETENTSESRD--------------- 446 Query: 208 XTQGI--DLGGVKEVENKKNLESIKQDST-------DFHSSNDLQDISLNILENTT--KV 354 QG D +VE ++N E ++D +FH +N+ + S N+LEN T + Sbjct: 447 --QGFAKDAYTKNKVEQQENDEEPEKDDIIRSSLDKNFHGNNNKSEYSENVLENETDPAI 504 Query: 355 IENEKEVDEYIGINNQISGNSKEISKSESVRLKHDYVDSNKSPLKHQVS----CPTSHIS 522 +E E ++++ G + ++G S E E + Y + ++ L+ Q S CP Sbjct: 505 VERENQINDVEGYD--VTGKSVESDLHEH-SPDNLYDLAARAMLQFQQSRNSNCPQKEEQ 561 Query: 523 TNVHSVPNNEKSNRGINVNKCIENNEFRISESVNKFPLKN--SDAHSILSTDFKKDSGSF 696 + + ++ SN + + ES + PLK+ + ++ L TD + D S Sbjct: 562 VSESYLGHSNGSNL----------SGRSLDESEEQIPLKDFTGENNNNLKTD-RGDLSSS 610 Query: 697 VAKPVYGIGNK---------IKTSESDESLKNKQLDNGRG---SSNQMEIVTEHTEDIPI 840 V V + K + +D ++ N L N S + + ++E+ D+P+ Sbjct: 611 VEIEVEKVSEKKLDGSTEKELVPLSTDTTINNSSLGNEDSIYYSLDDADAISENLTDVPL 670
Database: Non-redundant SwissProt sequences Posted date: Dec 6, 2005 7:40 AM Number of letters in database: 68,354,980 Number of sequences in database: 184,735 Database: swissprot.01 Posted date: Dec 6, 2005 8:18 AM Number of letters in database: 66,202,850 Number of sequences in database: 184,431 Lambda K H 0.303 0.122 0.322 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,124,307 Number of Sequences: 369166 Number of extensions: 1428098 Number of successful extensions: 2725 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2603 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2698 length of database: 68,354,980 effective HSP length: 110 effective length of database: 48,034,130 effective search space used: 8886314050 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.8 bits)