Planaria EST Database


DrC_01586

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01586
         (946 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O17583|LIN10_CAEEL  Abnormal cell lineage protein 10 (Pro...   343   3e-94
sp|O35430|APBA1_RAT  Amyloid beta A4 precursor protein-bindi...   306   5e-83
sp|Q02410|APBA1_HUMAN  Amyloid beta A4 precursor protein-bin...   303   6e-82
sp|Q99767|APBA2_HUMAN  Amyloid beta A4 precursor protein-bin...   292   8e-79
sp|Q5RD33|APBA2_PONPY  Amyloid beta A4 precursor protein-bin...   292   8e-79
sp|O35431|APBA2_RAT  Amyloid beta A4 precursor protein-bindi...   292   8e-79
sp|P98084|APBA2_MOUSE  Amyloid beta A4 precursor protein-bin...   290   5e-78
sp|O70248|APBA3_RAT  Amyloid beta A4 precursor protein-bindi...   258   2e-68
sp|O96018|APBA3_HUMAN  Amyloid beta A4 precursor protein-bin...   257   3e-68
sp|O88888|APBA3_MOUSE  Amyloid beta A4 precursor protein-bin...   253   4e-67
>sp|O17583|LIN10_CAEEL Abnormal cell lineage protein 10 (Protein lin-10)
          Length = 982

 Score =  343 bits (881), Expect = 3e-94
 Identities = 177/291 (60%), Positives = 220/291 (75%), Gaps = 13/291 (4%)
 Frame = +1

Query: 112  PTTLIEGLLFRANYLGSTQLTSDNRPSKDTRMIQAQEAVGRVKAPDSESQPSVAVDLFIS 291
            P  LIEG+LFRA YLGSTQ+  ++R SK  RM QAQEAV RVKAP+ + QPS  +DLFIS
Sbjct: 598  PAVLIEGVLFRARYLGSTQMLCESRGSKAARMAQAQEAVARVKAPEGDVQPSTEIDLFIS 657

Query: 292  SEKILILNTNLS---------EIMMDHNLKTISYIADIGNILVLMARRISHSHQ----SN 432
            +EKI++LNT+L          +I+MDH L+TISYIADIG+++VLMARR+S SH     S+
Sbjct: 658  TEKIMVLNTDLQRISDTDVRQDILMDHALRTISYIADIGDLVVLMARRMSTSHSDESCSD 717

Query: 433  SENREINNQCLNKIICHVFESDEAQLIAQSIGNAFQIAYIEFLKANGIDDPKIFKEVDYQ 612
             ++     +   K+ICHVFESDEA  IAQSIG AFQ+AY+EFL+ANGIDDP   +++DYQ
Sbjct: 718  GDSSGGGVRKTPKVICHVFESDEASFIAQSIGQAFQVAYVEFLRANGIDDPSYLRQIDYQ 777

Query: 613  DVLNDQEISGDELRMFANKDQHKEVIIPKQRGESLGVVIVESGWGSMLPTVVLANMNPNG 792
            +VLN QE+ GDEL MFA K+  KEV++PK+ GE LG+V+VESGWGSMLPTVVLA+MNP G
Sbjct: 778  EVLNSQELLGDELEMFAKKETQKEVVVPKKAGEPLGIVVVESGWGSMLPTVVLAHMNPVG 837

Query: 793  PAARCGSLNIGNQLIAINGHSLVGLPLLECQQLIKRCKIQTAVKVTVVNCP 945
            PAA    LNIG+Q+I ING SLVGLPL   Q  IK  K  TAV++TVV+ P
Sbjct: 838  PAAHSNKLNIGDQIININGISLVGLPLSAAQTQIKNMKTATAVRMTVVSTP 888
>sp|O35430|APBA1_RAT Amyloid beta A4 precursor protein-binding family A member 1
            (Neuron-specific X11 protein) (Neuronal
            Munc18-1-interacting protein 1) (Mint-1) (Adapter protein
            X11alpha)
          Length = 839

 Score =  306 bits (784), Expect = 5e-83
 Identities = 165/302 (54%), Positives = 210/302 (69%), Gaps = 21/302 (6%)
 Frame = +1

Query: 103  PDYPTTLIEGLLFRANYLGSTQLTSDNRPSKDTRMIQAQEAVGRVK-----------APD 249
            P  P  LI+G++F ANYLGSTQL SD  PSK+ RM+QAQEAV R+K           AP+
Sbjct: 451  PCDPEDLIDGIIFAANYLGSTQLLSDKTPSKNVRMMQAQEAVSRIKTAQKLAKSRKKAPE 510

Query: 250  SESQPSVAVDLFISSEKILILNTNLSEIMMDHNLKTISYIADIGNILVLMARR------- 408
             ESQP   VDLFIS+++I +LN +  E MMDH L+TISYIADIGNI+VLMARR       
Sbjct: 511  GESQPMTEVDLFISTQRIKVLNADTQEPMMDHPLRTISYIADIGNIVVLMARRRMPRSNS 570

Query: 409  ---ISHSHQSNSENREINNQCLNKIICHVFESDEAQLIAQSIGNAFQIAYIEFLKANGID 579
               +  SH S    R+       K+ICHVFES++AQLIAQSIG AF +AY EFL+ANGI+
Sbjct: 571  QENVEASHPSQDAKRQY------KMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGIN 624

Query: 580  DPKIFKEVDYQDVLNDQEISGDELRMFANKDQHKEVIIPKQRGESLGVVIVESGWGSMLP 759
             P+   + +Y D+LN Q++  D+L  F+  +  K+V I KQ+GE LGVVIVESGWGS+LP
Sbjct: 625  -PEDLSQKEYSDLLNTQDMYNDDLIHFSKSENCKDVFIEKQKGEILGVVIVESGWGSILP 683

Query: 760  TVVLANMNPNGPAARCGSLNIGNQLIAINGHSLVGLPLLECQQLIKRCKIQTAVKVTVVN 939
            TV++ANM   GPA + G LNIG+Q+++ING SLVGLPL  CQ +IK  K Q+ VK+ +V 
Sbjct: 684  TVIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVGLPLSTCQSIIKGLKNQSRVKLNIVR 743

Query: 940  CP 945
            CP
Sbjct: 744  CP 745
>sp|Q02410|APBA1_HUMAN Amyloid beta A4 precursor protein-binding family A member 1
            (Neuron-specific X11 protein) (Neuronal
            Munc18-1-interacting protein 1) (Mint-1) (Adapter protein
            X11alpha)
          Length = 837

 Score =  303 bits (775), Expect = 6e-82
 Identities = 163/302 (53%), Positives = 209/302 (69%), Gaps = 21/302 (6%)
 Frame = +1

Query: 103  PDYPTTLIEGLLFRANYLGSTQLTSDNRPSKDTRMIQAQEAVGRVK-----------APD 249
            P  P  LI+G++F ANYLGSTQL SD  PSK+ RM+QAQEAV R+K           AP+
Sbjct: 449  PCDPEDLIDGIIFAANYLGSTQLLSDKTPSKNVRMMQAQEAVSRIKMAQKLAKSRKKAPE 508

Query: 250  SESQPSVAVDLFISSEKILILNTNLSEIMMDHNLKTISYIADIGNILVLMARR------- 408
             ESQP   VDLFI +++I +LN +  E MMDH L+TISYIADIGNI+VLMARR       
Sbjct: 509  GESQPMTEVDLFILTQRIKVLNADTQETMMDHPLRTISYIADIGNIVVLMARRRIPRSNS 568

Query: 409  ---ISHSHQSNSENREINNQCLNKIICHVFESDEAQLIAQSIGNAFQIAYIEFLKANGID 579
               +  SH S    R+       K+ICHVFES++AQLIAQSIG AF +AY EFL+ANGI+
Sbjct: 569  QENVEASHPSQDGKRQY------KMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGIN 622

Query: 580  DPKIFKEVDYQDVLNDQEISGDELRMFANKDQHKEVIIPKQRGESLGVVIVESGWGSMLP 759
             P+   + +Y D+LN Q++  D+L  F+  +  K+V I KQ+GE LGVVIVESGWGS+LP
Sbjct: 623  -PEDLSQKEYSDLLNTQDMYNDDLIHFSKSENCKDVFIEKQKGEILGVVIVESGWGSILP 681

Query: 760  TVVLANMNPNGPAARCGSLNIGNQLIAINGHSLVGLPLLECQQLIKRCKIQTAVKVTVVN 939
            TV++ANM   GPA + G LNIG+Q+++ING SLVGLPL  CQ +IK  + Q+ VK+ +V 
Sbjct: 682  TVIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVGLPLSTCQSIIKGLENQSRVKLNIVR 741

Query: 940  CP 945
            CP
Sbjct: 742  CP 743
>sp|Q99767|APBA2_HUMAN Amyloid beta A4 precursor protein-binding family A member 2
            (Neuron-specific X11L protein) (Neuronal
            Munc18-1-interacting protein 2) (Mint-2) (Adapter protein
            X11beta)
          Length = 749

 Score =  292 bits (748), Expect = 8e-79
 Identities = 159/305 (52%), Positives = 207/305 (67%), Gaps = 24/305 (7%)
 Frame = +1

Query: 103  PDYPTTLIEGLLFRANYLGSTQLTSDNRPSKDTRMIQAQEAVGRVKA------------P 246
            P  P  LI+G++F ANYLGSTQL S+  PSK+ RM+QAQEAV RVK              
Sbjct: 360  PCEPEDLIDGIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVSRVKRMQKAAKIKKKANS 419

Query: 247  DSESQPSVAVDLFISSEKILILNTNLSEIMMDHNLKTISYIADIGNILVLMARRISHSHQ 426
            + ++Q    VDLFIS+++I +LN +  E MMDH L+TISYIADIGNI+VLMARR      
Sbjct: 420  EGDAQTLTEVDLFISTQRIKVLNADTQETMMDHALRTISYIADIGNIVVLMARR------ 473

Query: 427  SNSENREINNQCLN------------KIICHVFESDEAQLIAQSIGNAFQIAYIEFLKAN 570
                 R  +  C+             K+ICHVFES++AQLIAQSIG AF +AY EFL+AN
Sbjct: 474  --RMPRSASQDCIETTPGAQEGKKQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRAN 531

Query: 571  GIDDPKIFKEVDYQDVLNDQEISGDELRMFANKDQHKEVIIPKQRGESLGVVIVESGWGS 750
            GI+ P+   + +Y D++N QE+  D+L  F+N +  KE+ + K +GE LGVV+VESGWGS
Sbjct: 532  GIN-PEDLSQKEYSDIINTQEMYNDDLIHFSNSENCKELQLEKHKGEILGVVVVESGWGS 590

Query: 751  MLPTVVLANMNPNGPAARCGSLNIGNQLIAINGHSLVGLPLLECQQLIKRCKIQTAVKVT 930
            +LPTV+LANM   GPAAR G L+IG+Q+++ING SLVGLPL  CQ +IK  K QT VK+ 
Sbjct: 591  ILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLN 650

Query: 931  VVNCP 945
            +V+CP
Sbjct: 651  IVSCP 655
>sp|Q5RD33|APBA2_PONPY Amyloid beta A4 precursor protein-binding family A member 2
          Length = 749

 Score =  292 bits (748), Expect = 8e-79
 Identities = 159/305 (52%), Positives = 207/305 (67%), Gaps = 24/305 (7%)
 Frame = +1

Query: 103  PDYPTTLIEGLLFRANYLGSTQLTSDNRPSKDTRMIQAQEAVGRVKA------------P 246
            P  P  LI+G++F ANYLGSTQL S+  PSK+ RM+QAQEAV RVK              
Sbjct: 360  PCEPEDLIDGIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVSRVKRMQKAAKIKKKANS 419

Query: 247  DSESQPSVAVDLFISSEKILILNTNLSEIMMDHNLKTISYIADIGNILVLMARRISHSHQ 426
            + ++Q    VDLFIS+++I +LN +  E MMDH L+TISYIADIGNI+VLMARR      
Sbjct: 420  EGDAQTLTEVDLFISAQRIKVLNADTQETMMDHALRTISYIADIGNIVVLMARR------ 473

Query: 427  SNSENREINNQCLN------------KIICHVFESDEAQLIAQSIGNAFQIAYIEFLKAN 570
                 R  +  C+             K+ICHVFES++AQLIAQSIG AF +AY EFL+AN
Sbjct: 474  --RMPRSASQDCIETTPGAQEGKKQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRAN 531

Query: 571  GIDDPKIFKEVDYQDVLNDQEISGDELRMFANKDQHKEVIIPKQRGESLGVVIVESGWGS 750
            GI+ P+   + +Y D++N QE+  D+L  F+N +  KE+ + K +GE LGVV+VESGWGS
Sbjct: 532  GIN-PEDLSQKEYSDIINTQEMYNDDLIHFSNSENCKELQLEKHKGEILGVVVVESGWGS 590

Query: 751  MLPTVVLANMNPNGPAARCGSLNIGNQLIAINGHSLVGLPLLECQQLIKRCKIQTAVKVT 930
            +LPTV+LANM   GPAAR G L+IG+Q+++ING SLVGLPL  CQ +IK  K QT VK+ 
Sbjct: 591  ILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLN 650

Query: 931  VVNCP 945
            +V+CP
Sbjct: 651  IVSCP 655
>sp|O35431|APBA2_RAT Amyloid beta A4 precursor protein-binding family A member 2
            (Neuron-specific X11L protein) (Neuronal
            Munc18-1-interacting protein 2) (Mint-2) (Adapter protein
            X11beta)
          Length = 750

 Score =  292 bits (748), Expect = 8e-79
 Identities = 159/305 (52%), Positives = 207/305 (67%), Gaps = 24/305 (7%)
 Frame = +1

Query: 103  PDYPTTLIEGLLFRANYLGSTQLTSDNRPSKDTRMIQAQEAVGRVKA------------P 246
            P  P  LI+G++F ANYLGSTQL S+  PSK+ RM+QAQEAV RVK              
Sbjct: 361  PCEPEDLIDGIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVSRVKRMQKAAKIKKKANS 420

Query: 247  DSESQPSVAVDLFISSEKILILNTNLSEIMMDHNLKTISYIADIGNILVLMARRISHSHQ 426
            + ++Q    VDLFIS+++I +LN +  E MMDH L+TISYIADIGNI+VLMARR      
Sbjct: 421  EGDAQTLTEVDLFISTQRIKVLNADTQETMMDHALRTISYIADIGNIVVLMARR------ 474

Query: 427  SNSENREINNQCLN------------KIICHVFESDEAQLIAQSIGNAFQIAYIEFLKAN 570
                 R  +  C+             K+ICHVFES++AQLIAQSIG AF +AY EFL+AN
Sbjct: 475  --RMPRSASQDCIETTPGAQEGKKQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRAN 532

Query: 571  GIDDPKIFKEVDYQDVLNDQEISGDELRMFANKDQHKEVIIPKQRGESLGVVIVESGWGS 750
            GI+ P+   + +Y D++N QE+  D+L  F+N +  KE+ + K +GE LGVV+VESGWGS
Sbjct: 533  GIN-PEDLSQKEYSDIINTQEMYNDDLIHFSNSENCKELQLEKHKGEILGVVVVESGWGS 591

Query: 751  MLPTVVLANMNPNGPAARCGSLNIGNQLIAINGHSLVGLPLLECQQLIKRCKIQTAVKVT 930
            +LPTV+LANM   GPAAR G L+IG+Q+++ING SLVGLPL  CQ +IK  K QT VK+ 
Sbjct: 592  ILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLN 651

Query: 931  VVNCP 945
            +V+CP
Sbjct: 652  IVSCP 656
>sp|P98084|APBA2_MOUSE Amyloid beta A4 precursor protein-binding family A member 2
            (Neuron-specific X11L protein) (Neuronal
            Munc18-1-interacting protein 2) (Mint-2) (Adapter protein
            X11beta)
          Length = 750

 Score =  290 bits (741), Expect = 5e-78
 Identities = 157/299 (52%), Positives = 205/299 (68%), Gaps = 24/299 (8%)
 Frame = +1

Query: 121  LIEGLLFRANYLGSTQLTSDNRPSKDTRMIQAQEAVGRVKA------------PDSESQP 264
            LI+G++F ANYLGSTQL S+  PSK+ RM+QAQEAV RVK              + ++Q 
Sbjct: 367  LIDGIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVSRVKRMQKAAKIKKKANSEGDAQT 426

Query: 265  SVAVDLFISSEKILILNTNLSEIMMDHNLKTISYIADIGNILVLMARRISHSHQSNSENR 444
               VDLFIS+++I +LN +  E MMDH L+TISYIADIGNI+VLMARR           R
Sbjct: 427  LTEVDLFISTQRIKVLNADTQETMMDHALRTISYIADIGNIVVLMARR--------RMPR 478

Query: 445  EINNQCLN------------KIICHVFESDEAQLIAQSIGNAFQIAYIEFLKANGIDDPK 588
              +  C+             K+ICHVFES++AQLIAQSIG AF +AY EFL+ANGI+ P+
Sbjct: 479  SASQDCIETTPGAQEGKKQYKMICHVFESEDAQLIAQSIGQAFSVAYQEFLRANGIN-PE 537

Query: 589  IFKEVDYQDVLNDQEISGDELRMFANKDQHKEVIIPKQRGESLGVVIVESGWGSMLPTVV 768
               + +Y D++N QE+  D+L  F+N +  KE+ + K +GE LGVV+VESGWGS+LPTV+
Sbjct: 538  DLSQKEYSDIINTQEMYNDDLIHFSNSENCKELQLEKHKGEILGVVVVESGWGSILPTVI 597

Query: 769  LANMNPNGPAARCGSLNIGNQLIAINGHSLVGLPLLECQQLIKRCKIQTAVKVTVVNCP 945
            LANM   GPAAR G L+IG+Q+++ING SLVGLPL  CQ +IK  K QT VK+ +V+CP
Sbjct: 598  LANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCP 656
>sp|O70248|APBA3_RAT Amyloid beta A4 precursor protein-binding family A member 3
            (Neuron-specific X11L2 protein) (Neuronal
            Munc18-1-interacting protein 3) (Mint-3) (Adapter protein
            X11gamma)
          Length = 569

 Score =  258 bits (659), Expect = 2e-68
 Identities = 136/275 (49%), Positives = 191/275 (69%)
 Frame = +1

Query: 121  LIEGLLFRANYLGSTQLTSDNRPSKDTRMIQAQEAVGRVKAPDSESQPSVAVDLFISSEK 300
            L++G+LF A YLGSTQL S+  P   TRM QAQEA+ RVKAP+ ESQP   VD+FIS+++
Sbjct: 210  LMDGVLFGAKYLGSTQLLSERNPPPSTRMGQAQEAMDRVKAPEGESQPMTEVDIFISTKR 269

Query: 301  ILILNTNLSEIMMDHNLKTISYIADIGNILVLMARRISHSHQSNSENREINNQCLNKIIC 480
            + +L  +  + +MDH L+TISYIADIG +LVLMARR   + ++ S++R+   + L K++C
Sbjct: 270  VKVLAADSQDALMDHALQTISYIADIGPVLVLMARR-RLAKRTTSQDRQ---RQLYKMLC 325

Query: 481  HVFESDEAQLIAQSIGNAFQIAYIEFLKANGIDDPKIFKEVDYQDVLNDQEISGDELRMF 660
            HVF S++AQLIAQ+IG AF IAY +FL+ NGID      +V  Q   +       +L  F
Sbjct: 326  HVFHSEDAQLIAQAIGQAFSIAYSQFLQENGIDP----SQVGMQPSASASHPHNGDLDHF 381

Query: 661  ANKDQHKEVIIPKQRGESLGVVIVESGWGSMLPTVVLANMNPNGPAARCGSLNIGNQLIA 840
             N    +EV I K+ GE LGV +VESGWGS+LPT V+AN+   GPA RCG+L+IG+++ A
Sbjct: 382  CNSQNCREVCIQKRPGEGLGVALVESGWGSLLPTAVIANLLHGGPAERCGALSIGDRVTA 441

Query: 841  INGHSLVGLPLLECQQLIKRCKIQTAVKVTVVNCP 945
            ING SLVGL L  CQ  ++  +  ++V +++++CP
Sbjct: 442  INGTSLVGLSLAACQAAVREVRRHSSVTLSIIHCP 476
>sp|O96018|APBA3_HUMAN Amyloid beta A4 precursor protein-binding family A member 3
            (Neuron-specific X11L2 protein) (Neuronal
            Munc18-1-interacting protein 3) (Mint-3) (Adapter protein
            X11gamma)
          Length = 575

 Score =  257 bits (657), Expect = 3e-68
 Identities = 136/275 (49%), Positives = 186/275 (67%)
 Frame = +1

Query: 121  LIEGLLFRANYLGSTQLTSDNRPSKDTRMIQAQEAVGRVKAPDSESQPSVAVDLFISSEK 300
            L++G++F A YLGSTQL S+  P   TRM QA+EA+ RVKAPD E+QP   VDLF+S+++
Sbjct: 215  LLDGVIFGARYLGSTQLVSERNPPTSTRMAQAREAMDRVKAPDGETQPMTEVDLFVSTKR 274

Query: 301  ILILNTNLSEIMMDHNLKTISYIADIGNILVLMARRISHSHQSNSENREINNQCLNKIIC 480
            I +L  +  E MMDH L TISY ADIG +LVLMARR      +  ++     + L K++C
Sbjct: 275  IKVLTADSQEAMMDHALHTISYTADIGCVLVLMARRRLARRPAPQDH----GRRLYKMLC 330

Query: 481  HVFESDEAQLIAQSIGNAFQIAYIEFLKANGIDDPKIFKEVDYQDVLNDQEISGDELRMF 660
            HVF +++AQLIAQ+IG AF  AY +FL+ +GID      +V          +   +L  F
Sbjct: 331  HVFYAEDAQLIAQAIGQAFAAAYSQFLRESGIDP----SQVGVHPSPGACHLHNGDLDHF 386

Query: 661  ANKDQHKEVIIPKQRGESLGVVIVESGWGSMLPTVVLANMNPNGPAARCGSLNIGNQLIA 840
            +N D  +EV + K+RGE LGV +VESGWGS+LPT V+AN+   GPA R G+L+IG++L A
Sbjct: 387  SNSDNCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTA 446

Query: 841  INGHSLVGLPLLECQQLIKRCKIQTAVKVTVVNCP 945
            ING SLVGLPL  CQ  ++  K QT+V +++V+CP
Sbjct: 447  INGTSLVGLPLAACQAAVRETKSQTSVTLSIVHCP 481
>sp|O88888|APBA3_MOUSE Amyloid beta A4 precursor protein-binding family A member 3
            (Neuron-specific X11L2 protein) (Neuronal
            Munc18-1-interacting protein 3) (Mint-3) (Adapter protein
            X11gamma)
          Length = 571

 Score =  253 bits (647), Expect = 4e-67
 Identities = 135/281 (48%), Positives = 192/281 (68%)
 Frame = +1

Query: 103  PDYPTTLIEGLLFRANYLGSTQLTSDNRPSKDTRMIQAQEAVGRVKAPDSESQPSVAVDL 282
            P  P  L++G++F A YLGSTQL S+  P+  TRM QAQEA+ RVKAP+ E+QP V VD+
Sbjct: 206  PCGPEELMDGVIFGAKYLGSTQLLSERSPAPSTRMGQAQEAMDRVKAPEGETQPMVEVDI 265

Query: 283  FISSEKILILNTNLSEIMMDHNLKTISYIADIGNILVLMARRISHSHQSNSENREINNQC 462
            FIS++++ +L  +  + +MDH L+TISYIADIG +LVLMARR   + ++  ++R+   + 
Sbjct: 266  FISTKRVKVLAADSQDALMDHALQTISYIADIGPVLVLMARR-RLARRTTPQDRQ---RR 321

Query: 463  LNKIICHVFESDEAQLIAQSIGNAFQIAYIEFLKANGIDDPKIFKEVDYQDVLNDQEISG 642
            L K++CHVF S++AQLIAQ+IG AF IAY +FL+ N ID      +V  Q          
Sbjct: 322  LYKMLCHVFHSEDAQLIAQAIGQAFSIAYSQFLQENRIDP----SQVGTQPSTAASHPHN 377

Query: 643  DELRMFANKDQHKEVIIPKQRGESLGVVIVESGWGSMLPTVVLANMNPNGPAARCGSLNI 822
             +L  F N    +EV I K+ GE LGV +VESGWGS+LPT V+AN+   GPA RCG+L+I
Sbjct: 378  GDLDHFCNSQNCREVCIQKRPGEGLGVALVESGWGSLLPTAVIANLLHGGPAERCGALSI 437

Query: 823  GNQLIAINGHSLVGLPLLECQQLIKRCKIQTAVKVTVVNCP 945
            G+++ AING SLVGL L  CQ  ++  +  ++V +++++CP
Sbjct: 438  GDRVTAINGTSLVGLSLAACQAAVREVRRLSSVTLSIIHCP 478
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.317    0.134    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,294,793
Number of Sequences: 369166
Number of extensions: 1968868
Number of successful extensions: 5045
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5018
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9798962520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)