Planaria EST Database


DrC_01564

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01564
         (917 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P70498|PLD2_RAT  Phospholipase D2 (PLD 2) (Choline phosph...    34   0.66 
sp|P97813|PLD2_MOUSE  Phospholipase D2 (PLD 2) (Choline phos...    33   0.86 
sp|P14222|PERF_HUMAN  Perforin 1 precursor (P1) (Lymphocyte ...    32   3.3  
sp|O14939|PLD2_HUMAN  Phospholipase D2 (PLD 2) (Choline phos...    32   3.3  
sp|P10820|PERF_MOUSE  Perforin 1 precursor (P1) (Lymphocyte ...    31   4.3  
sp|O88281|EGFL3_RAT  Multiple EGF-like-domain protein 3 prec...    31   4.3  
sp|O75095|EGFL3_HUMAN  Multiple EGF-like-domain protein 3 pr...    31   5.6  
sp|Q02858|TIE2_MOUSE  Angiopoietin-1 receptor precursor (Tyr...    30   7.3  
sp|Q66D26|PHNC_YERPS  Phosphonates import ATP-binding protei...    30   7.3  
sp|Q80V70|EGFL3_MOUSE  Multiple EGF-like-domain protein 3          30   7.3  
>sp|P70498|PLD2_RAT Phospholipase D2 (PLD 2) (Choline phosphatase 2)
           (Phosphatidylcholine-hydrolyzing phospholipase D2)
           (PLD1C) (rPLD2)
          Length = 933

 Score = 33.9 bits (76), Expect = 0.66
 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
 Frame = +1

Query: 445 SFGDWEMSIMDNLVPIDRRGEPLYYVITRHALPDLDDGTVYKINDLLREAIERYYKINER 624
           S G  E SI++  +   R  +   Y+  +  +   D  TV  +N +  E ++R  K +E+
Sbjct: 614 SAGTLESSILNAYLHTIRESQHFLYIENQFFISCSDGRTV--LNKVGDEIVDRILKAHEQ 671

Query: 625 KGCLDF-----TSPNFDPDANVDGGNCEHPLLNFTF 717
             C          P F+ D +  GGN    +L+FT+
Sbjct: 672 GQCFRVYVLLPLLPGFEGDISTGGGNSIQAILHFTY 707
>sp|P97813|PLD2_MOUSE Phospholipase D2 (PLD 2) (Choline phosphatase 2)
           (Phosphatidylcholine-hydrolyzing phospholipase D2)
           (PLD1C) (mPLD2)
          Length = 933

 Score = 33.5 bits (75), Expect = 0.86
 Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
 Frame = +1

Query: 445 SFGDWEMSIMDNLVPIDRRGEPLYYVITRHALPDLDDGTVYKINDLLREAIERYYKINER 624
           S G  E SI++  +   R  +   Y+  +  +   D  TV  +N +  E ++R  K +E+
Sbjct: 614 SAGTLENSILNAYLHTIRESQHFLYIENQFFISCSDGRTV--LNKVGDEIVDRILKAHEQ 671

Query: 625 KGCLDF-----TSPNFDPDANVDGGNCEHPLLNFTF 717
             C          P F+ D +  GGN    +L+FT+
Sbjct: 672 GQCFRVYLLLPLLPGFEGDISTGGGNSIQAILHFTY 707
>sp|P14222|PERF_HUMAN Perforin 1 precursor (P1) (Lymphocyte pore forming protein) (PFP)
           (Cytolysin)
          Length = 555

 Score = 31.6 bits (70), Expect = 3.3
 Identities = 47/213 (22%), Positives = 75/213 (35%), Gaps = 20/213 (9%)
 Frame = +1

Query: 28  VQLRYNIFQSMFEPEAPLSSTFKNRIMDIAGLIVENKDSLYLTYLADMIIRDYGTHVIRS 207
           V+ R+  F  +  P  PL   FK  + D+      +    YL      +I +YGTH IR+
Sbjct: 174 VECRFYSFHVVHTP--PLHPDFKRALGDLPHHFNASTQPAYLR-----LISNYGTHFIRA 226

Query: 208 IDAGAILYKTDVLKSTYVKNVYSNMNAISVXXXXXXXXXXNIGAKYSTQRTQNELDEYNK 387
           ++ G  +     L++  +      +    V          NIG   S        +E  K
Sbjct: 227 VELGGRISALTALRTCEL--ALEGLTDNEVEDCLTVEAQVNIGIHGSISAEAKACEEKKK 284

Query: 388 NVDTT----------HIHRIGG-------AIFGVNS---SFGDWEMSIMDNLVPIDRRGE 507
               T          H   +GG        +FG+ +    +  W  S+  +   +D   E
Sbjct: 285 KHKMTASFHQTYRERHSEVVGGHHTSINDLLFGIQAGPEQYSAWVNSLPGSPGLVDYTLE 344

Query: 508 PLYYVITRHALPDLDDGTVYKINDLLREAIERY 606
           PL      H L D  D       + LR A+ +Y
Sbjct: 345 PL------HVLLDSQDPR----REALRRALSQY 367
>sp|O14939|PLD2_HUMAN Phospholipase D2 (PLD 2) (Choline phosphatase 2)
           (Phosphatidylcholine-hydrolyzing phospholipase D2)
           (PLD1C) (hPLD2)
          Length = 933

 Score = 31.6 bits (70), Expect = 3.3
 Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
 Frame = +1

Query: 445 SFGDWEMSIMDNLVPIDRRGEPLYYVITRHALPDLDDGTVYKINDLLREAIERYYKINER 624
           S G  E SI++  +   R  +   Y+  +  +   D  TV  +N +  E ++R  K +++
Sbjct: 614 SAGTLENSILNAYLHTIRESQHFLYIENQFFISCSDGRTV--LNKVGDEIVDRILKAHKQ 671

Query: 625 KGCLDF-----TSPNFDPDANVDGGNCEHPLLNFTF 717
             C          P F+ D +  GGN    +L+FT+
Sbjct: 672 GWCYRVYVLLPLLPGFEGDISTGGGNSIQAILHFTY 707
>sp|P10820|PERF_MOUSE Perforin 1 precursor (P1) (Lymphocyte pore forming protein)
           (Cytolysin)
          Length = 554

 Score = 31.2 bits (69), Expect = 4.3
 Identities = 38/186 (20%), Positives = 71/186 (38%), Gaps = 20/186 (10%)
 Frame = +1

Query: 28  VQLRYNIFQSMFEPEAPLSSTFKNRIMDIAGLIVENKDSLYLTYLADMIIRDYGTHVIRS 207
           V+ R   F+ + +P  PL   FK  +  +      + +  Y       +I  YGTH I +
Sbjct: 173 VECRMYSFRLVQKP--PLHLDFKKALRALPRNFNSSTEHAY-----HRLISSYGTHFITA 225

Query: 208 IDAGAILYKTDVLKSTYVKNVYSNMNAISVXXXXXXXXXXNIGAKYSTQRTQNELDE--- 378
           +D G  +     L++  +    + + A  V          +IGA+ S        +E   
Sbjct: 226 VDLGGRISVLTALRTCQL--TLNGLTADEVGDCLNVEAQVSIGAQASVSSEYKACEEKKK 283

Query: 379 -------YNKNVDTTHIHRIGG-------AIFGVNSS---FGDWEMSIMDNLVPIDRRGE 507
                  +++     H+  +GG        +FG  ++   F  W  S+  N   +D   E
Sbjct: 284 QHKMATSFHQTYRERHVEVLGGPLDSTHDLLFGNQATPEQFSTWTASLPSNPGLVDYSLE 343

Query: 508 PLYYVI 525
           PL+ ++
Sbjct: 344 PLHTLL 349
>sp|O88281|EGFL3_RAT Multiple EGF-like-domain protein 3 precursor (Multiple epidermal
            growth factor-like domains 6)
          Length = 1574

 Score = 31.2 bits (69), Expect = 4.3
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = +1

Query: 679  GGNCEHPLLNFTFG-GIYQNCTGPLGPSYSQINPLTGSYSCPLGFSSVKLHSGLIQCDTS 855
            G +CE       FG    Q C   L P+ +  + +TG   CP GF+        + C+ +
Sbjct: 1159 GPHCEQACPRGWFGEACAQRC---LCPTNASCHHVTGECRCPPGFTG-------LSCEQA 1208

Query: 856  CSGWWFWKHCDTRC 897
            C    F K C+  C
Sbjct: 1209 CQPGTFGKDCEHLC 1222

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = +1

Query: 679  GGNCEHPLLNFTFG-GIYQNCTGPLGPSYSQINPLTGSYSCPLGFSSVKLHSGLIQCDTS 855
            G  C+   ++ TFG    ++C    G S   +   TG+  CP G+           C+ +
Sbjct: 1116 GDKCQSSCVSGTFGVHCEEHCACRKGASCHHV---TGACFCPPGWRGP-------HCEQA 1165

Query: 856  CSGWWFWKHCDTRC 897
            C   WF + C  RC
Sbjct: 1166 CPRGWFGEACAQRC 1179
>sp|O75095|EGFL3_HUMAN Multiple EGF-like-domain protein 3 precursor (Multiple epidermal
            growth factor-like domains 6)
          Length = 1229

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +1

Query: 772  NPLTGSYSCPLGFSSVKLHSGLIQCDTSCSGWWFWKHCDTRCS 900
            +P TG   CP G++  K       C + C   WF + C  RCS
Sbjct: 907  DPHTGRCLCPAGWTGDK-------CQSPCLRGWFGEACAQRCS 942
>sp|Q02858|TIE2_MOUSE Angiopoietin-1 receptor precursor (Tyrosine-protein kinase receptor
           TIE-2) (Tyrosine-protein kinase receptor TEK) (P140 TEK)
           (Tunica interna endothelial cell kinase) (HYK) (STK1)
          Length = 1122

 Score = 30.4 bits (67), Expect = 7.3
 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
 Frame = +1

Query: 679 GGNCEHPLLNFTFGGIY-QNCTGPLG-PSYSQINPLTGSYSCPLGFSSVKLHSGLIQCDT 852
           G  CE      TFG    + C+GP G  SY    P     SC  G+         +QC+ 
Sbjct: 248 GRTCEKACEPHTFGRTCKERCSGPEGCKSYVFCLPDPYGCSCATGWRG-------LQCNE 300

Query: 853 SCSGWWFWKHCDTRC 897
           +C   ++   C  RC
Sbjct: 301 ACPSGYYGPDCKLRC 315
>sp|Q66D26|PHNC_YERPS Phosphonates import ATP-binding protein phnC
 sp|Q8ZGU5|PHNC_YERPE Phosphonates import ATP-binding protein phnC
          Length = 278

 Score = 30.4 bits (67), Expect = 7.3
 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
 Frame = +1

Query: 64  EPEAPLSSTFKNRIMDIAGLIVENKDSLYLTYLADMIIRDYGTHVIRSIDAGAILY--KT 237
           EP A L      RIM+    I EN  ++ +   +  +++DY T VI  I  G I++    
Sbjct: 199 EPVASLDPKNTTRIMNTLQKISENDIAVIVNLHSVDLVKDYCTRVI-GIAHGRIIFDGPP 257

Query: 238 DVLKSTYVKNVYSNMNA 288
            +L  + ++++YS+ +A
Sbjct: 258 SMLNDSIIQDIYSDESA 274
>sp|Q80V70|EGFL3_MOUSE Multiple EGF-like-domain protein 3
          Length = 656

 Score = 30.4 bits (67), Expect = 7.3
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = +1

Query: 679 GGNCEHPLLNFTFG-GIYQNCTGPLGPSYSQINPLTGSYSCPLGFSSVKLHSGLIQCDTS 855
           G  C+ P ++  FG    ++C    G +   +   TG+  CP G+           C+ +
Sbjct: 198 GDKCQSPCVSGMFGVHCEEHCACRKGATCHHV---TGACLCPPGWRGS-------HCEQA 247

Query: 856 CSGWWFWKHCDTRC 897
           C   WF + C  RC
Sbjct: 248 CPRGWFGEACAQRC 261
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,818,245
Number of Sequences: 369166
Number of extensions: 2083990
Number of successful extensions: 5188
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5184
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9366655350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)