Planaria EST Database


DrC_01480

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01480
         (502 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P29508|SCCA1_HUMAN  Squamous cell carcinoma antigen 1 (SC...    73   4e-13
sp|P48594|SCCA2_HUMAN  Squamous cell carcinoma antigen 2 (SC...    69   6e-12
sp|P05544|CPI3_RAT  Contrapsin-like protease inhibitor 3 pre...    64   2e-10
sp|Q60854|SPB6_MOUSE  Placental thrombin inhibitor (Protease...    64   2e-10
sp|P05545|CPI1_RAT  Contrapsin-like protease inhibitor 1 pre...    64   3e-10
sp|O54758|ALMS_TAMSI  Alpha-1-antitrypsin-like protein CM55-...    63   3e-10
sp|P09006|CPI6_RAT  Contrapsin-like protease inhibitor 6 pre...    61   1e-09
sp|Q5I2A0|SPA3G_MOUSE  Serine protease inhibitor A3G (Serine...    61   1e-09
sp|P09005|SPI21_RAT  Serine protease inhibitor 2.1 (SPI-2.1)       60   3e-09
sp|Q5R536|AACT_PONPY  Alpha-1-antichymotrypsin precursor (ACT)     60   3e-09
>sp|P29508|SCCA1_HUMAN Squamous cell carcinoma antigen 1 (SCCA-1) (Protein T4-A)
          Length = 390

 Score = 72.8 bits (177), Expect = 4e-13
 Identities = 40/88 (45%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = +2

Query: 17  LGMIKPFSSEADFSRMTGNRELMIDDVIHKAFIDVDENGVEAAAATAVLMLGDCIFNATP 196
           +GM+  F+ +AD S MTG+R L++  V+HKAF++V E G EAAAATAV+  G     +T 
Sbjct: 302 MGMVDIFNGDADLSGMTGSRGLVLSGVLHKAFVEVTEEGAEAAAATAVVGFGSSP-TSTN 360

Query: 197 IEFTCDRPFMFALIKDFTLP-LFIGHFT 277
            EF C+ PF+F + ++ T   LF G F+
Sbjct: 361 EEFHCNHPFLFFIRQNKTNSILFYGRFS 388
>sp|P48594|SCCA2_HUMAN Squamous cell carcinoma antigen 2 (SCCA-2) (Leupin)
          Length = 390

 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = +2

Query: 17  LGMIKPFSSEADFSRMTGNRELMIDDVIHKAFIDVDENGVEAAAATAVLMLGDCIFNATP 196
           +GM+  F+ +AD S MT +  L +  V+HKAF++V E GVEAAAATAV+++ +    +T 
Sbjct: 302 MGMVNIFNGDADLSGMTWSHGLSVSKVLHKAFVEVTEEGVEAAAATAVVVV-ELSSPSTN 360

Query: 197 IEFTCDRPFMFALIKDFTLP-LFIGHFT 277
            EF C+ PF+F + ++ T   LF G F+
Sbjct: 361 EEFCCNHPFLFFIRQNKTNSILFYGRFS 388
>sp|P05544|CPI3_RAT Contrapsin-like protease inhibitor 3 precursor (CPI-23) (Serine
           protease inhibitor 1) (SPI-1)
          Length = 413

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
 Frame = +2

Query: 14  DLGMIKPFSSEADFSRMTGNRELMIDDVIHKAFIDVDENGVEAAAATAVLMLGDCIFNAT 193
           +LG+ K FS +AD SR+TG ++L +  V+HKA +DVDE G EA AAT V      +    
Sbjct: 326 ELGIKKVFSQQADLSRITGTKDLYVSQVVHKAVLDVDETGTEATAATGVA----TVIRRQ 381

Query: 194 PIEFTCDRPFMFALI-KDFTLPLFIGHFT 277
           P     +RPFM  +   D    LF+   T
Sbjct: 382 PRTLNFNRPFMVVITDMDSQSILFVAKIT 410
>sp|Q60854|SPB6_MOUSE Placental thrombin inhibitor (Protease inhibitor 6) (PI-6) (Serpin
           B6)
          Length = 378

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
 Frame = +2

Query: 17  LGMIKPFSSEADFSRMTGNRELMIDDVIHKAFIDVDENGVEAAAATAVLMLGDCIFNATP 196
           LGM   F   ADFS M+  + L +  V+HKAF++V+E G EAAAATA +M   C+   TP
Sbjct: 291 LGMTDAFGGRADFSGMSSKQGLFLSKVVHKAFVEVNEEGTEAAAATAGMMTVRCM-RFTP 349

Query: 197 IEFTCDRPFMFAL--IKDFTLPLFIGHFT 277
             F  D PF+F +  +K   + LF G F+
Sbjct: 350 -RFCADHPFLFFIHHVKTNGI-LFCGRFS 376
>sp|P05545|CPI1_RAT Contrapsin-like protease inhibitor 1 precursor (CPI-21)
           (Kallikrein-binding protein) (KBP) (Growth
           hormone-regulated proteinase inhibitor) (Serine protease
           inhibitor 2) (SPI-2) (GHR-P63) (SPI-2.3) (Thyroid
           hormone-regulated protein)
          Length = 416

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 33/74 (44%), Positives = 45/74 (60%)
 Frame = +2

Query: 14  DLGMIKPFSSEADFSRMTGNRELMIDDVIHKAFIDVDENGVEAAAATAVLMLGDCIFNAT 193
           +LG+ K FS +AD SR+TG + L +  V+HKA +DVDE G E AAATAV      +    
Sbjct: 326 ELGIRKIFSQQADLSRITGTKNLHVSQVVHKAVLDVDETGTEGAAATAVTAALKSLPQTI 385

Query: 194 PIEFTCDRPFMFAL 235
           P+    +RPFM  +
Sbjct: 386 PL-LNFNRPFMLVI 398
>sp|O54758|ALMS_TAMSI Alpha-1-antitrypsin-like protein CM55-MS precursor
          Length = 413

 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = +2

Query: 17  LGMIKPFSSEADFSRMTGNRELMIDDVIHKAFIDVDENGVEAAAATAVLMLGDCIFNATP 196
           LG+ K FS+ AD S +T    L++   +HKA +D+DE G EAA AT    +G   F + P
Sbjct: 325 LGITKVFSNAADLSGVTEEAPLIVSKALHKAVLDIDEEGTEAAGAT----VGGITFMSRP 380

Query: 197 IEFTCDRPFMFALIKDFT-LPLFIG 268
            E   DRPF+  + +  T  PLF+G
Sbjct: 381 KEVIFDRPFLVVIYEHHTKSPLFVG 405
>sp|P09006|CPI6_RAT Contrapsin-like protease inhibitor 6 precursor (CPI-26) (Serine
           protease inhibitor 3) (SPI-3) (SPI-2.2)
          Length = 418

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 31/74 (41%), Positives = 47/74 (63%)
 Frame = +2

Query: 14  DLGMIKPFSSEADFSRMTGNRELMIDDVIHKAFIDVDENGVEAAAATAVLMLGDCIFNAT 193
           +LG+ + FS++AD S +TG+++LM+  V+HKA +DV E G EAAAAT V  +        
Sbjct: 328 ELGIKEVFSTQADLSGITGDKDLMVSQVVHKAVLDVAETGTEAAAATGVKFV-PMSAKLD 386

Query: 194 PIEFTCDRPFMFAL 235
           P+    DRPF+  +
Sbjct: 387 PLIIAFDRPFLMII 400
>sp|Q5I2A0|SPA3G_MOUSE Serine protease inhibitor A3G (Serine protease inhibitor 2A)
           (Serpin A3G) (Serpin 2A)
          Length = 440

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
 Frame = +2

Query: 14  DLGMIKPFSSEADFSRMTGNRELMIDDVIHKAFIDVDENGVEAAAATAVLMLGDC-IFNA 190
           +LG+ + FS++AD S +TG ++L +  V+HKA +DV E G EAAAAT +  +G C +F+ 
Sbjct: 318 ELGIREVFSTQADLSAITGTKDLRVSQVVHKAVLDVAETGTEAAAATGMAGVGCCAVFDF 377

Query: 191 TPIEFTCDRPFMFAL 235
             I F  +RPF+  +
Sbjct: 378 LEIFF--NRPFLMII 390
>sp|P09005|SPI21_RAT Serine protease inhibitor 2.1 (SPI-2.1)
          Length = 214

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +2

Query: 14  DLGMIKPFSSEADFSRMTGNRELMIDDVIHKAFIDVDENGVEAAAATAVLMLGDCIFNAT 193
           +LG+ K FS +AD SR+TG ++L +  V+HKA +DV E G EA AAT V      +    
Sbjct: 127 ELGIKKVFSQQADLSRITGTKDLYVSQVVHKAVLDVAETGTEATAATGVA----TVIRRQ 182

Query: 194 PIEFTCDRPFM-FALIKDFTLPLFIGHFT 277
           P     ++PFM F    D    LF+   T
Sbjct: 183 PRTLNFNQPFMVFITDMDSQSILFVAKIT 211
>sp|Q5R536|AACT_PONPY Alpha-1-antichymotrypsin precursor (ACT)
          Length = 423

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
 Frame = +2

Query: 17  LGMIKPFSSEADFSRMTGNRELMIDDVIHKAFIDVDENGVEAAAATAV--LMLGDCIFNA 190
           LG+++ F+S+AD S +TG R L++  V+HKA +DV E G EA+AATAV   +L   +   
Sbjct: 331 LGIVEAFTSKADLSGITGARNLVVSQVVHKAVLDVFEEGTEASAATAVKITLLSALVDPM 390

Query: 191 TPIEFTCDRPFMFALI 238
           T + F  +RPF+  ++
Sbjct: 391 TIVRF--NRPFLMIIV 404
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,766,209
Number of Sequences: 369166
Number of extensions: 740622
Number of successful extensions: 1608
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1588
length of database: 68,354,980
effective HSP length: 102
effective length of database: 49,512,010
effective search space used: 3168768640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)