Planaria EST Database


DrC_01471

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01471
         (932 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9NZW4|DSPP_HUMAN  Dentin sialophosphoprotein precursor [...    35   0.39 
sp|Q700D9|MYBF_ARATH  Putative Myb family transcription fact...    33   1.1  
sp|Q7M3S9|RNGB_DICDI  Ring finger protein B (Protein rngB)         33   1.5  
sp|P47820|ACE_RAT  Angiotensin-converting enzyme, somatic is...    32   2.0  
sp|P38080|AKL1_YEAST  Serine/threonine-protein kinase AKL1         32   2.0  
sp|Q00816|HEX2_YEAST  Protein HEX2 (Protein SRN1) (Protein R...    32   2.0  
sp|O55188|DMP1_MOUSE  Dentin matrix acidic phosphoprotein 1 ...    32   2.6  
sp|P32581|IME2_YEAST  Meiosis induction protein kinase IME2/...    32   3.3  
sp|Q9P7W6|MLH1_SCHPO  Putative MUTL protein homolog 1 (DNA m...    32   3.3  
sp|P39705|NUP60_YEAST  Nucleoporin NUP60 (Nuclear pore prote...    31   5.7  
>sp|Q9NZW4|DSPP_HUMAN Dentin sialophosphoprotein precursor [Contains: Dentin
           phosphoprotein (Dentin phosphophoryn) (DPP); Dentin
           sialoprotein (DSP)]
          Length = 1253

 Score = 34.7 bits (78), Expect = 0.39
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
 Frame = +3

Query: 63  SRSFSYDTNETVNEADQYLNLNPVQSNRSPHMSKRSNHVPVESENSYDYNNRTDS----E 230
           S S S D+++  + +D   + N   S+ S   S  S+    +S +S D +N +DS    +
Sbjct: 643 SDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSS--DSSSSSDSSNSSDSSDSSD 700

Query: 231 NSYASESFGNREVEDSEKLNHSYSTENEVAKSPSRRYSIASQISQTSE 374
           +S +SES  + +  DS+  + S S+ +  + S S   S +S  S +S+
Sbjct: 701 SSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSDSSD 748
>sp|Q700D9|MYBF_ARATH Putative Myb family transcription factor At1g14600
          Length = 255

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
 Frame = +3

Query: 63  SRSFSYDTNETVNEADQYLNLNPVQSNRS----PHMSKRSNHVPVESENSYDYNNRTDSE 230
           S +F   T+ T N+ D +LN+  ++  ++        K  +H  +E+EN+ +    T  E
Sbjct: 125 SFNFREQTSATDNDDDDFLNIMNMERTKTFAGNGESIKFQSHHSLEAENTKNIWKNTWRE 184

Query: 231 NSYASESFGNREVEDSEKLNHSYSTENEVAKSPSRRYSIASQISQTSE 374
           N +  E     E+  S  LNH ++ +     + S      S +S+TSE
Sbjct: 185 NEHEEE----EELSLSLSLNHPHNHQQRWKSNAS------SSLSETSE 222
>sp|Q7M3S9|RNGB_DICDI Ring finger protein B (Protein rngB)
          Length = 943

 Score = 32.7 bits (73), Expect = 1.5
 Identities = 37/214 (17%), Positives = 82/214 (38%)
 Frame = +3

Query: 63  SRSFSYDTNETVNEADQYLNLNPVQSNRSPHMSKRSNHVPVESENSYDYNNRTDSENSYA 242
           S + SY +++++       N N  Q+N + + +  +N++   +  + + NN  ++ N+  
Sbjct: 392 SLASSYQSSQSLQ-----FNQNQNQNNNNNNNNNNNNNIQTTTTTTTNNNNNNNNNNNNN 446

Query: 243 SESFGNREVEDSEKLNHSYSTENEVAKSPSRRYSIASQISQTSEWRTDYXXXXXXXXXXX 422
           + +      +  +++ H  S  + +++S S     +   S +S   T             
Sbjct: 447 NNNNNVESNQQQQQIQHQTSPMSVLSRSNSNISLNSLNSSSSSILSTPSTLSTTTTTTTT 506

Query: 423 XXXXXXXXXXXXFNHGRQGFPVKLPFKQRSSSQSNDVRGSGFPESVESGSYLTAEYERPS 602
                        N  R G P   PF  RSS+ +N+        +  S +Y   +  + +
Sbjct: 507 SHASHTSHTSNRSNGSRGGIPSIPPFNGRSSNHNNN-------NNSNSNNYNNHQQTKTN 559

Query: 603 FNESLEVSNMDSFVLPNGYNEGYSQNDENNSILR 704
             E L +  + S    N Y++     D   ++ R
Sbjct: 560 SAEELILEELKSL---NIYDQAACNKDFQTNLKR 590
>sp|P47820|ACE_RAT Angiotensin-converting enzyme, somatic isoform precursor
           (Dipeptidyl carboxypeptidase I) (Kininase II) [Contains:
           Angiotensin-converting enzyme, somatic isoform, soluble
           form]
          Length = 1313

 Score = 32.3 bits (72), Expect = 2.0
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +3

Query: 465 HGRQGFPVKLPFKQRSSSQSNDV-RGSGFPESVESGSYLTAEYERPSFNESLE 620
           H   G P++ P  Q  ++ SN+  R  GF ++   G+Y  + YE PSF ESLE
Sbjct: 199 HDAVGIPLR-PLYQDFTALSNEAYRQDGFSDT---GAYWRSWYESPSFEESLE 247
>sp|P38080|AKL1_YEAST Serine/threonine-protein kinase AKL1
          Length = 1108

 Score = 32.3 bits (72), Expect = 2.0
 Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
 Frame = +3

Query: 93  TVNEADQYLNL-------NPVQSNRSPHMSKRSNHVPVESENSYDYNNRTDSENSYASES 251
           +V+E D YL+        +P  S +SP ++ +S     +S +SY    R+    SY + +
Sbjct: 479 SVSELDTYLDKELVKQSSDPTISEQSPRLNTQSLPQRQKSTSSYSSGGRSMKSTSYGAAT 538

Query: 252 FGNREVEDSEKLNHSYSTENEVAKSPSRRYSIA 350
            G+ E   +EK       +   + +P  + ++A
Sbjct: 539 IGSDEALANEKTAGINKMKQHKSNNPFPKMNVA 571
>sp|Q00816|HEX2_YEAST Protein HEX2 (Protein SRN1) (Protein REG1)
          Length = 1014

 Score = 32.3 bits (72), Expect = 2.0
 Identities = 15/67 (22%), Positives = 33/67 (49%)
 Frame = +3

Query: 75  SYDTNETVNEADQYLNLNPVQSNRSPHMSKRSNHVPVESENSYDYNNRTDSENSYASESF 254
           S D N+   + +   N+  + +NR+P ++ +   +P+ S   +   N +D + S  S S 
Sbjct: 490 SDDENKQYVDVNNNANVTTINNNRTPLLAIQHKSIPINSATEHLNKNTSDDDTSSQSSSS 549

Query: 255 GNREVED 275
            + + E+
Sbjct: 550 SHSDDEE 556
>sp|O55188|DMP1_MOUSE Dentin matrix acidic phosphoprotein 1 precursor (Dentin matrix
           protein 1) (DMP-1) (AG1)
          Length = 503

 Score = 32.0 bits (71), Expect = 2.6
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = +3

Query: 168 SNHVPVESENSYDYNNRTDSENSYASESFGNREVEDSEKLNHSYSTENEVAKSPSRRYSI 347
           SN    +S+++ D  ++ +S +    ++  ++  EDS +     S  +E A  PS+  S 
Sbjct: 280 SNSRETQSDSTEDTASKEESRSESQEDTAESQSQEDSPEGQDPSSESSEEAGEPSQESSS 339

Query: 348 ASQISQTSEWRTD 386
            SQ   TSE R D
Sbjct: 340 ESQEGVTSESRGD 352
>sp|P32581|IME2_YEAST Meiosis induction protein kinase IME2/SME1
          Length = 645

 Score = 31.6 bits (70), Expect = 3.3
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
 Frame = +3

Query: 81  DTNETVNEADQYL---NLNPVQSNRSPHMSKRSNHVPVESE-NSYDYNNRTDSENSYASE 248
           D    V   +Q L    +NPV +N  P     S  +P E+E N  D +N     ++  S 
Sbjct: 395 DARGNVTNTEQALIFAGINPVATNTKPIYFNSSTKLPAETESNDIDISNNDHDSHAMCSP 454

Query: 249 SFGNREVEDSEKLNHSYSTENE 314
           +    ++   E LN     +N+
Sbjct: 455 TLNQEKLTLVEFLNEFVEEDND 476
>sp|Q9P7W6|MLH1_SCHPO Putative MUTL protein homolog 1 (DNA mismatch repair protein MLH1)
          Length = 684

 Score = 31.6 bits (70), Expect = 3.3
 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
 Frame = +3

Query: 117 LNLNPVQSNRSPHMSKRSNHVPVESENSY-------DYNNRTDSENSYASE----SFGNR 263
           LN++P Q + + H SKR  H   + E +        +   RTD+E SY  +    S  N 
Sbjct: 307 LNMSPEQLDVNVHPSKRIVHFLYDQEIATSICDKLGEILERTDTERSYPLQAMIPSISNT 366

Query: 264 EVEDSEKLNHSYSTENEVAKSPSRRYSIASQIS 362
           +  +S       + EN + ++  R  SI S +S
Sbjct: 367 KNAESSSQKAVRTYENYLVRTDpreRSIKSMLS 399
>sp|P39705|NUP60_YEAST Nucleoporin NUP60 (Nuclear pore protein NUP60)
          Length = 539

 Score = 30.8 bits (68), Expect = 5.7
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = +3

Query: 162 KRSNHVPVESENSYDYNNRTDSENSYASESFGNREVEDSEKLNHSYSTENEVAKSPSRRY 341
           K S   P+   N+  +N + D+ N+  + + G+     S K + +YS+     K+   RY
Sbjct: 175 KESGSTPISISNAPTFNPKYDTSNASMNTTLGSI---GSRKYSFNYSSLPSPYKTTVYRY 231

Query: 342 SIASQISQT 368
           S A +I  T
Sbjct: 232 SAAKKIPDT 240
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,517,397
Number of Sequences: 369166
Number of extensions: 1492220
Number of successful extensions: 4529
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4516
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9606826000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)