Planaria EST Database


DrC_01456

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01456
         (528 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P14202|TEGU_SCHMA  Tegument antigen (I(H)A) (Antigen SmA2...    80   4e-15
sp|P32070|SM21_SCHMA  Antigen Sm21.7                               66   5e-11
sp|Q07167|SM16_SCHMA  16 kDa calcium-binding protein (Egg an...    40   0.005
sp|Q9UR05|DYL1_SCHPO  Dynein light chain 1, cytoplasmic            39   0.010
sp|Q94748|DYL2_SCHMA  Probable dynein light chain (T-cell-st...    38   0.013
sp|O94111|DYL1_EMENI  Dynein light chain, cytoplasmic (8 kDa...    38   0.017
sp|P02589|TNNC2_RANES  Troponin C, skeletal muscle                 37   0.038
sp|O97341|CALM_SUBDO  Calmodulin (CaM)                             37   0.038
sp|Q7DMP0|CALM2_SOLTU  Calmodulin-2/4 (CaM-2/4)                    36   0.050
sp|Q7DMN9|CALM5_SOLTU  Calmodulin-5/6/7/8 (CaM-5/6/7/8)            36   0.050
>sp|P14202|TEGU_SCHMA Tegument antigen (I(H)A) (Antigen SmA22.6) (A12)
          Length = 190

 Score = 79.7 bits (195), Expect = 4e-15
 Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
 Frame = +1

Query: 1   IELFYEIDATLNDEISYTELQNYMKKRGYTDKDVDRWMQNFDENKDGKITLDEFIGKLDV 180
           I  F EIDA  N+ I   EL  Y +K     K +D W+  FD +KD KI+++EF     +
Sbjct: 14  IRAFLEIDADSNEMIDKQELIKYCQKYRLDMKLIDPWIARFDTDKDNKISIEEFCRGFGL 73

Query: 181 ANDFYERPK------------VLDDDIEMINGGNTPFQRQYI-------MTNIVKRGNRL 303
                 R K             L  +IE+I    +  ++  I       + N  + GN +
Sbjct: 74  KVSEIRREKDELKKERDGKFPKLPPNIEIIAATMSKTKQYEICCQFKEYVDNTSRTGNDM 133

Query: 304 HKDNKKEEAKFIKNKLDDQLDKLWHCLIVKGQYWAFYSHEPENSLVFKFKNAVYILFRTP 483
                +E A  +K+ LD+   ++W  +++ G YW  +SHEP  S+ FK+ N V + +RTP
Sbjct: 134 -----REVANKMKSLLDNTYGRVWQVVLLTGSYWMNFSHEPFLSIQFKYNNYVCLAWRTP 188

Query: 484 S 486
           S
Sbjct: 189 S 189
>sp|P32070|SM21_SCHMA Antigen Sm21.7
          Length = 184

 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
 Frame = +1

Query: 34  NDEISYTELQNYMKKRGYTDKDVDRWMQNFDENKDGKITLDEFIGKLDVANDFYE----- 198
           ++ +  ++L    +K     K V+ W+  FD +KD KIT +EF   L +  +        
Sbjct: 20  DETVETSKLSESCRKEKLDMKQVNEWIALFDVDKDQKITFEEFCRGLGLKQNEMRIERNH 79

Query: 199 -------RPKVLDDDIEMINGGNTPFQRQYIMTNIVKR-GNRLHKD-NKKEEAKFIKNKL 351
                  R + L + + +I     P  +Q  +T + K   N + KD +  +  K  K++L
Sbjct: 80  IKTVQSGREQSLPEGVSII-ASTMPKPKQVEVTQLFKDIYNEVKKDPDMNKVVKTFKSEL 138

Query: 352 DDQLDKLWHCLIVKGQYWAFYSHEPENSLVFKFKNAVYILFRTPS 486
           + +  ++W    V   YWA +SHEP  S+ F++ N + + +RTPS
Sbjct: 139 ERRYGRVWQVNAVTHSYWASFSHEPFQSIQFQYDNKIILAWRTPS 183
>sp|Q07167|SM16_SCHMA 16 kDa calcium-binding protein (Egg antigen SME16)
          Length = 143

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
 Frame = +1

Query: 4   ELFYEIDATLNDEISYTELQNYMKKRGYTDKDVDR-----WMQNFDENKDGKITLDEFI 165
           E+F  ID   + ++S  EL  ++K  G    D+D+     WM   D+NKDG++  DEF+
Sbjct: 80  EVFQSIDKDGSGKVSIKELDEFLKTSGM---DIDQNSLRNWMTQNDKNKDGELDYDEFL 135

 Score = 37.7 bits (86), Expect = 0.017
 Identities = 18/57 (31%), Positives = 32/57 (56%)
 Frame = +1

Query: 4   ELFYEIDATLNDEISYTELQNYMKKRGYTDKDVDRWMQNFDENKDGKITLDEFIGKL 174
           E+F+ ID   N  ++  E+   +K+ G      D+ ++  D N DGKI+L+E++  L
Sbjct: 9   EVFHAIDKDKNGFLTREEIAQCLKEVGVCPNVADKIIKETDMNSDGKISLEEYLNAL 65
>sp|Q9UR05|DYL1_SCHPO Dynein light chain 1, cytoplasmic
          Length = 85

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = +1

Query: 316 KKEEAKFIKNKLDDQLDKLWHCLIVKGQYWAFYSHEPENSLVFKFKNAVYILFRT 480
           +K+ A FIK + D +    WHC IV   + +F +HE  + + F      ++LF++
Sbjct: 31  EKDIAAFIKREFDKKFSPTWHC-IVGRNFGSFVTHESRHFIYFYLGTVAFLLFKS 84
>sp|Q94748|DYL2_SCHMA Probable dynein light chain (T-cell-stimulating antigen SM10)
          Length = 89

 Score = 38.1 bits (87), Expect = 0.013
 Identities = 14/55 (25%), Positives = 34/55 (61%)
 Frame = +1

Query: 316 KKEEAKFIKNKLDDQLDKLWHCLIVKGQYWAFYSHEPENSLVFKFKNAVYILFRT 480
           +K+ A +IK + D + +  WHC++ K  + ++ +HE ++ + F  +   ++LF++
Sbjct: 35  EKDVAAYIKKEFDRKYNPNWHCIVGK-HFGSYVTHETQHFIYFYLQERAFLLFKS 88
>sp|O94111|DYL1_EMENI Dynein light chain, cytoplasmic (8 kDa cytoplasmic dynein light
           chain)
          Length = 94

 Score = 37.7 bits (86), Expect = 0.017
 Identities = 16/55 (29%), Positives = 32/55 (58%)
 Frame = +1

Query: 316 KKEEAKFIKNKLDDQLDKLWHCLIVKGQYWAFYSHEPENSLVFKFKNAVYILFRT 480
           +K+ A++IK + D +    WHC +V   + +F +HE ++ + F   +   +LF+T
Sbjct: 40  EKDIAQYIKREFDSRKGATWHC-VVGRNFGSFVTHETKHFIYFYLGHCAILLFKT 93
>sp|P02589|TNNC2_RANES Troponin C, skeletal muscle
          Length = 162

 Score = 36.6 bits (83), Expect = 0.038
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +1

Query: 4   ELFYEIDATLNDEISYTELQNYMKKRG--YTDKDVDRWMQNFDENKDGKITLDEFIGKLD 177
           E F   D   +  I   EL   ++  G   TD++++  M++ D+N DGKI  DEF+  ++
Sbjct: 100 ECFRIFDKNADGYIDSEELGEILRSSGESITDEEIEELMKDGDKNNDGKIDFDEFLKMME 159
>sp|O97341|CALM_SUBDO Calmodulin (CaM)
          Length = 149

 Score = 36.6 bits (83), Expect = 0.038
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +1

Query: 4   ELFYEIDATLNDEISYTELQNYMKKRG--YTDKDVDRWMQNFDENKDGKITLDEFIGKL 174
           E F   D   N  IS  EL++ M   G   TD++VD  ++  D + DG++  +EF+G +
Sbjct: 88  EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADTDGDGQVNYEEFVGMM 146
>sp|Q7DMP0|CALM2_SOLTU Calmodulin-2/4 (CaM-2/4)
          Length = 124

 Score = 36.2 bits (82), Expect = 0.050
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +1

Query: 4   ELFYEIDATLNDEISYTELQNYMKKRG--YTDKDVDRWMQNFDENKDGKITLDEFI 165
           E F   D   N  IS  EL++ M   G   TD++VD  ++  D + DG+I  DEF+
Sbjct: 63  EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFV 118
>sp|Q7DMN9|CALM5_SOLTU Calmodulin-5/6/7/8 (CaM-5/6/7/8)
          Length = 149

 Score = 36.2 bits (82), Expect = 0.050
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +1

Query: 4   ELFYEIDATLNDEISYTELQNYMKKRG--YTDKDVDRWMQNFDENKDGKITLDEFI 165
           E F   D   N  IS  EL++ M   G   TD++VD  ++  D + DG+I  DEF+
Sbjct: 88  EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFV 143
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,270,279
Number of Sequences: 369166
Number of extensions: 1108140
Number of successful extensions: 3754
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3738
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3551563800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)