Planaria EST Database


DrC_01449

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01449
         (954 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P51892|DNL1_XENLA  DNA ligase I (Polydeoxyribonucleotide ...   362   e-100
sp|P37913|DNL1_MOUSE  DNA ligase I (Polydeoxyribonucleotide ...   347   2e-95
sp|P18858|DNL1_HUMAN  DNA ligase I (Polydeoxyribonucleotide ...   341   2e-93
sp|Q9JHY8|DNL1_RAT  DNA ligase I (Polydeoxyribonucleotide sy...   338   2e-92
sp|P12000|DNLI_SCHPO  DNA ligase (Polydeoxyribonucleotide sy...   313   6e-85
sp|Q42572|DNLI_ARATH  DNA ligase (Polydeoxyribonucleotide sy...   311   1e-84
sp|Q27474|DNLI_CAEEL  DNA ligase (Polydeoxyribonucleotide sy...   300   5e-81
sp|P04819|DNLI_YEAST  DNA ligase I, mitochondrial precursor ...   266   8e-71
sp|Q6L195|DNLI_PICTO  DNA ligase (Polydeoxyribonucleotide sy...   209   9e-54
sp|Q9HJ26|DNLI_THEAC  DNA ligase (Polydeoxyribonucleotide sy...   204   2e-52
>sp|P51892|DNL1_XENLA DNA ligase I (Polydeoxyribonucleotide synthase [ATP])
          Length = 1070

 Score =  362 bits (929), Expect = e-100
 Identities = 170/295 (57%), Positives = 225/295 (76%)
 Frame = +2

Query: 32   SVQSCIIDSEAVAWDRETKSILPFQKLSTRKKKDVNEDEIKIQVCIYAFDLIYFNGQSLV 211
            SV+SCI+D+EAVA D E K I PFQ L+TRK+KDV+  EIK+QVC+YAFD++Y NG+SLV
Sbjct: 765  SVKSCILDTEAVAGDAEKKQIQPFQVLTTRKRKDVDASEIKVQVCVYAFDMLYLNGESLV 824

Query: 212  KQSLKERRDILKENFVEKPGQFMLASSINSCTTDEISEFLEQSIKDKCEGLMIKTLDKNA 391
            K+   +RR +L+++F+E  GQFM A+ ++   TDEISEFL+QSIKD CEGLM+KTL+++A
Sbjct: 825  KEPFAKRRQLLRDSFLETEGQFMFATYMDKSNTDEISEFLDQSIKDSCEGLMVKTLEQDA 884

Query: 392  TYQISQRSRXXXXXXXXXXXXXGDTVDLVVIGASFGTGKRANKYGTFLLGCYDPENDMYQ 571
            TY+I++RS              GDT+DLVVIGA  G GKR   YG FLL  YD E++ YQ
Sbjct: 885  TYEIAKRSHNWLKLKKDYLEGVGDTLDLVVIGAYLGKGKRTGIYGGFLLASYDEESEEYQ 944

Query: 572  TICKLGTGFSDEDLDNFYNQLREIATRRPDNYYDYDKTCKPDCWFDPKYVWEIKAADLSI 751
            TICK+GTGF+D+DL+  YN L++     P +YY +D   +PD WFDP  VWE+K ADLSI
Sbjct: 945  TICKIGTGFTDDDLEKHYNFLKDHVIENPRSYYRWDSATEPDHWFDPVQVWEVKCADLSI 1004

Query: 752  SPDHKAAVGLVDDEKGISLRFPRFIRVREDKKPEGATTSRQIAEMYRNQDSVKST 916
            SP HKAA+GLV+D+KGISLRFPRF+R+R+DKKPE +T S Q+A++YR Q  +++T
Sbjct: 1005 SPVHKAALGLVEDQKGISLRFPRFLRIRDDKKPEESTNSFQVADLYRKQQQIQNT 1059
>sp|P37913|DNL1_MOUSE DNA ligase I (Polydeoxyribonucleotide synthase [ATP])
          Length = 916

 Score =  347 bits (891), Expect = 2e-95
 Identities = 170/298 (57%), Positives = 217/298 (72%)
 Frame = +2

Query: 32   SVQSCIIDSEAVAWDRETKSILPFQKLSTRKKKDVNEDEIKIQVCIYAFDLIYFNGQSLV 211
            SV S I+D+EAVAWDRE K I PFQ L+TRK+K+V+  EI++QVC+YAFDLIY NG+SLV
Sbjct: 610  SVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLV 669

Query: 212  KQSLKERRDILKENFVEKPGQFMLASSINSCTTDEISEFLEQSIKDKCEGLMIKTLDKNA 391
            +Q L  RR +L+ENFVE  G+F+  +S+++  T++I+EFLEQS+KD CEGLM+KTLD +A
Sbjct: 670  RQPLSRRRQLLRENFVETEGEFVFTTSLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDA 729

Query: 392  TYQISQRSRXXXXXXXXXXXXXGDTVDLVVIGASFGTGKRANKYGTFLLGCYDPENDMYQ 571
            TY+I++RS              GDT+DLVVIGA  G GKRA +YG FLL  YD E++  Q
Sbjct: 730  TYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQ 789

Query: 572  TICKLGTGFSDEDLDNFYNQLREIATRRPDNYYDYDKTCKPDCWFDPKYVWEIKAADLSI 751
             ICKLGTGFSDE+L+  +  L+ +    P  Y   D    PD W DP  VWE+K ADLS+
Sbjct: 790  AICKLGTGFSDEELEEHHQSLQALVLPTPRPYVRIDGAVAPDHWLDPSIVWEVKCADLSL 849

Query: 752  SPDHKAAVGLVDDEKGISLRFPRFIRVREDKKPEGATTSRQIAEMYRNQDSVKSTQIS 925
            SP + AA GLVD EKGISLRFPRFIRVR+DK+PE ATTS Q+A +YR Q  +++ Q S
Sbjct: 850  SPIYPAARGLVDKEKGISLRFPRFIRVRKDKQPEQATTSNQVASLYRKQSQIQNQQSS 907
>sp|P18858|DNL1_HUMAN DNA ligase I (Polydeoxyribonucleotide synthase [ATP])
          Length = 919

 Score =  341 bits (875), Expect = 2e-93
 Identities = 167/296 (56%), Positives = 216/296 (72%)
 Frame = +2

Query: 32   SVQSCIIDSEAVAWDRETKSILPFQKLSTRKKKDVNEDEIKIQVCIYAFDLIYFNGQSLV 211
            SV S I+D+EAVAWDRE K I PFQ L+TRK+K+V+  EI++QVC+YAFDLIY NG+SLV
Sbjct: 612  SVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLV 671

Query: 212  KQSLKERRDILKENFVEKPGQFMLASSINSCTTDEISEFLEQSIKDKCEGLMIKTLDKNA 391
            ++ L  RR +L+ENFVE  G+F+ A+S+++   ++I+EFLEQS+KD CEGLM+KTLD +A
Sbjct: 672  REPLSRRRQLLRENFVETEGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDA 731

Query: 392  TYQISQRSRXXXXXXXXXXXXXGDTVDLVVIGASFGTGKRANKYGTFLLGCYDPENDMYQ 571
            TY+I++RS              GDT+DLVVIGA  G GKRA +YG FLL  YD +++  Q
Sbjct: 732  TYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQ 791

Query: 572  TICKLGTGFSDEDLDNFYNQLREIATRRPDNYYDYDKTCKPDCWFDPKYVWEIKAADLSI 751
             ICKLGTGFSDE+L+  +  L+ +    P  Y   D    PD W DP  VWE+K ADLS+
Sbjct: 792  AICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVIPDHWLDPSAVWEVKCADLSL 851

Query: 752  SPDHKAAVGLVDDEKGISLRFPRFIRVREDKKPEGATTSRQIAEMYRNQDSVKSTQ 919
            SP + AA GLVD +KGISLRFPRFIRVREDK+PE ATTS Q+A +YR Q  +++ Q
Sbjct: 852  SPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQ 907
>sp|Q9JHY8|DNL1_RAT DNA ligase I (Polydeoxyribonucleotide synthase [ATP])
          Length = 918

 Score =  338 bits (866), Expect = 2e-92
 Identities = 164/298 (55%), Positives = 215/298 (72%)
 Frame = +2

Query: 32   SVQSCIIDSEAVAWDRETKSILPFQKLSTRKKKDVNEDEIKIQVCIYAFDLIYFNGQSLV 211
            SV S I+D+EAVAWDRE K I PFQ L+TRK+K+V+  EI++QVC+YAFDLIY NG+SL 
Sbjct: 612  SVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLA 671

Query: 212  KQSLKERRDILKENFVEKPGQFMLASSINSCTTDEISEFLEQSIKDKCEGLMIKTLDKNA 391
            +Q L  RR +L+ENFVE  G+F+ A+S+++   ++I+EFLEQS+KD CEGLM+KTLD +A
Sbjct: 672  RQPLSRRRQLLRENFVETEGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDA 731

Query: 392  TYQISQRSRXXXXXXXXXXXXXGDTVDLVVIGASFGTGKRANKYGTFLLGCYDPENDMYQ 571
            TY+I++RS              GDT+DLVVIGA  G GKR  +YG FLL  YD E++   
Sbjct: 732  TYEIAKRSHNWLKLKKDYLEGVGDTLDLVVIGAYLGRGKRPGRYGGFLLAAYDEESEELA 791

Query: 572  TICKLGTGFSDEDLDNFYNQLREIATRRPDNYYDYDKTCKPDCWFDPKYVWEIKAADLSI 751
             ICKLGTGFSDE+L+  +  ++ +    P  Y   D    P+ W DP  VWE+K ADL++
Sbjct: 792  AICKLGTGFSDEELEEHHQNMQALLLPTPRPYVRIDGAVAPNHWLDPSIVWEVKCADLTL 851

Query: 752  SPDHKAAVGLVDDEKGISLRFPRFIRVREDKKPEGATTSRQIAEMYRNQDSVKSTQIS 925
            SP ++AA G+VD EKGISLRFPRFIRVREDK+PE ATTS Q+A +YR Q  +++ Q S
Sbjct: 852  SPIYRAARGMVDKEKGISLRFPRFIRVREDKQPEQATTSDQVASLYRKQSQIQNQQSS 909
>sp|P12000|DNLI_SCHPO DNA ligase (Polydeoxyribonucleotide synthase [ATP])
          Length = 768

 Score =  313 bits (801), Expect = 6e-85
 Identities = 150/290 (51%), Positives = 205/290 (70%), Gaps = 3/290 (1%)
 Frame = +2

Query: 38   QSCIIDSEAVAWDRETKSILPFQKLSTRKKKDVNEDEIKIQVCIYAFDLIYFNGQSLVKQ 217
            +S I+D EAV WDR+   ILPFQKL+TRK+KDV   +IK++ C++AFD++Y NGQ L++ 
Sbjct: 462  RSFILDCEAVGWDRDENKILPFQKLATRKRKDVKIGDIKVRACLFAFDILYLNGQPLLET 521

Query: 218  SLKERRDILKENFVEKPGQFMLASSINSCTTDEISEFLEQSIKDKCEGLMIKTLD-KNAT 394
             L ERR +L   F    G F  A   +  + + I EFLE+S+KD CEGLM+K L+  ++ 
Sbjct: 522  PLNERRKLLYSMFQPSTGDFTFAKHSDQKSIESIEEFLEESVKDSCEGLMVKMLEGPDSH 581

Query: 395  YQISQRSRXXXXXXXXXXXXXGDTVDLVVIGASFGTGKRANKYGTFLLGCYDPENDMYQT 574
            Y+ S+RSR             GD++DL+VIGA +G GKR + YG FLLGCYDP+ +  Q+
Sbjct: 582  YEPSKRSRHWLKVKKDYLSGVGDSLDLIVIGAYYGKGKRTSVYGAFLLGCYDPDTETVQS 641

Query: 575  ICKLGTGFSDEDLDNFYNQLREIATRRPDNYYDYD--KTCKPDCWFDPKYVWEIKAADLS 748
            ICKLGTGFS+E L+ FYNQL++I   +  ++Y +      +PD WF+PKY+WE+ AADLS
Sbjct: 642  ICKLGTGFSEEHLETFYNQLKDIVISKKKDFYAHSDVPAHQPDVWFEPKYLWEVLAADLS 701

Query: 749  ISPDHKAAVGLVDDEKGISLRFPRFIRVREDKKPEGATTSRQIAEMYRNQ 898
            +SP +KAA+G V ++KGISLRFPRFIR+REDK  E ATTS Q++E YR+Q
Sbjct: 702  LSPVYKAAIGYVQEDKGISLRFPRFIRIREDKSWEDATTSEQVSEFYRSQ 751
>sp|Q42572|DNLI_ARATH DNA ligase (Polydeoxyribonucleotide synthase [ATP])
          Length = 790

 Score =  311 bits (798), Expect = 1e-84
 Identities = 155/289 (53%), Positives = 202/289 (69%)
 Frame = +2

Query: 32   SVQSCIIDSEAVAWDRETKSILPFQKLSTRKKKDVNEDEIKIQVCIYAFDLIYFNGQSLV 211
            SV+S I+D E VA+DRE K ILPFQ LSTR +K+VN ++IK+ VCI+AFD++Y NGQ L+
Sbjct: 488  SVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLI 547

Query: 212  KQSLKERRDILKENFVEKPGQFMLASSINSCTTDEISEFLEQSIKDKCEGLMIKTLDKNA 391
            +++LK RR+ L E+F E PG F  A+++ S   DEI +FL+ S+   CEGL+IKTLD +A
Sbjct: 548  QENLKIRREKLYESFEEDPGYFQFATAVTSNDIDEIQKFLDASVDVGCEGLIIKTLDSDA 607

Query: 392  TYQISQRSRXXXXXXXXXXXXXGDTVDLVVIGASFGTGKRANKYGTFLLGCYDPENDMYQ 571
            TY+ ++RS              GD+VDLV I A  G GKR   YG FLL CYD + + +Q
Sbjct: 608  TYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVYGAFLLACYDVDKEEFQ 667

Query: 572  TICKLGTGFSDEDLDNFYNQLREIATRRPDNYYDYDKTCKPDCWFDPKYVWEIKAADLSI 751
            +ICK+GTGFSD  LD   + LR      P  YY    +  PD WF+P  VWE+KAADL+I
Sbjct: 668  SICKIGTGFSDAMLDERSSSLRSQVIATPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTI 727

Query: 752  SPDHKAAVGLVDDEKGISLRFPRFIRVREDKKPEGATTSRQIAEMYRNQ 898
            SP H+AA G+VD +KGISLRFPR +RVREDKKPE AT+S QIA++Y+ Q
Sbjct: 728  SPVHRAATGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADLYQAQ 776
>sp|Q27474|DNLI_CAEEL DNA ligase (Polydeoxyribonucleotide synthase [ATP])
          Length = 773

 Score =  300 bits (767), Expect = 5e-81
 Identities = 147/296 (49%), Positives = 209/296 (70%)
 Frame = +2

Query: 35   VQSCIIDSEAVAWDRETKSILPFQKLSTRKKKDVNEDEIKIQVCIYAFDLIYFNGQSLVK 214
            V S I+D+E VA D E   ILPFQ LSTRK+K+  +D   ++V ++ FDL+YFNG+ LV+
Sbjct: 334  VTSFIVDAEVVAID-EAGLILPFQVLSTRKRKNATDDN-GVKVVVFLFDLLYFNGEPLVR 391

Query: 215  QSLKERRDILKENFVEKPGQFMLASSINSCTTDEISEFLEQSIKDKCEGLMIKTLDKNAT 394
            + L++RR++L+ NF +  G F  A+S+++  TDEI+ F ++++++KCEGLMIKTLD  AT
Sbjct: 392  KPLRKRRELLRTNFKKIDGSFYFATSVDTNDTDEINSFFDEAVQNKCEGLMIKTLDTEAT 451

Query: 395  YQISQRSRXXXXXXXXXXXXXGDTVDLVVIGASFGTGKRANKYGTFLLGCYDPENDMYQT 574
            Y+IS+RS              GDT+DLVV+GA  G GKR   YG +LLGCY+P  + Y++
Sbjct: 452  YEISRRSHSWLKMKKDYVDGVGDTLDLVVMGAYSGVGKRTGVYGGYLLGCYNPTTEEYES 511

Query: 575  ICKLGTGFSDEDLDNFYNQLREIATRRPDNYYDYDKTCKPDCWFDPKYVWEIKAADLSIS 754
            +CK+GTGF+DEDL   Y  L++    +  +YY +D T KPD  F P  V+E+K AD++IS
Sbjct: 512  VCKIGTGFTDEDLAEQYKILQDKKIDKSPSYYQFDHTLKPDDTFSPYLVFEVKCADITIS 571

Query: 755  PDHKAAVGLVDDEKGISLRFPRFIRVREDKKPEGATTSRQIAEMYRNQDSVKSTQI 922
            P HKAA GL DD KGISLRFPRF+R+R+DK  + AT+S Q+ EMY+NQ++  + +I
Sbjct: 572  PRHKAASGLTDDGKGISLRFPRFLRIRDDKNSDDATSSEQVLEMYKNQEAFANQKI 627
>sp|P04819|DNLI_YEAST DNA ligase I, mitochondrial precursor (Polydeoxyribonucleotide
            synthase [ATP])
          Length = 755

 Score =  266 bits (679), Expect = 8e-71
 Identities = 130/295 (44%), Positives = 196/295 (66%), Gaps = 1/295 (0%)
 Frame = +2

Query: 32   SVQSCIIDSEAVAWDRETKSILPFQKLSTRKKKDVNEDEIKIQVCIYAFDLIYFNGQSLV 211
            + ++ I+D EAVAWD++   ILPFQ LSTRK+KDV  +++K++VC++AFD++ +N + L+
Sbjct: 463  TTKNLILDCEAVAWDKDQGKILPFQVLSTRKRKDVELNDVKVKVCLFAFDILCYNDERLI 522

Query: 212  KQSLKERRDILKENFVEKPGQFMLASSINSCTTDEISEFLEQSIKDKCEGLMIKTLD-KN 388
             +SLKERR+ L +     PG+F  A+ I +   DE+ +FL++S+   CEGLM+K L+   
Sbjct: 523  NKSLKERREYLTKVTKVVPGEFQYATQITTNNLDELQKFLDESVNHSCEGLMVKMLEGPE 582

Query: 389  ATYQISQRSRXXXXXXXXXXXXXGDTVDLVVIGASFGTGKRANKYGTFLLGCYDPENDMY 568
            + Y+ S+RSR             GD++DL V+GA +G GKR   YG FLLGCY+ +   +
Sbjct: 583  SHYEPSKRSRNWLKLKKDYLEGVGDSLDLCVLGAYYGRGKRTGTYGGFLLGCYNQDTGEF 642

Query: 569  QTICKLGTGFSDEDLDNFYNQLREIATRRPDNYYDYDKTCKPDCWFDPKYVWEIKAADLS 748
            +T CK+GTGFSDE L   +++L       P   + +D + +PD WF+P  ++E+  ADLS
Sbjct: 643  ETCCKIGTGFSDEMLQLLHDRLTPTIIDGPKATFVFDSSAEPDVWFEPTTLFEVLTADLS 702

Query: 749  ISPDHKAAVGLVDDEKGISLRFPRFIRVREDKKPEGATTSRQIAEMYRNQDSVKS 913
            +SP +KA  G    +KG+SLRFPRF+R+REDK  E AT+S QI E+Y NQ  +++
Sbjct: 703  LSPIYKA--GSATFDKGVSLRFPRFLRIREDKGVEDATSSDQIVELYENQSHMQN 755
>sp|Q6L195|DNLI_PICTO DNA ligase (Polydeoxyribonucleotide synthase [ATP])
          Length = 590

 Score =  209 bits (532), Expect = 9e-54
 Identities = 112/295 (37%), Positives = 176/295 (59%), Gaps = 3/295 (1%)
 Frame = +2

Query: 32   SVQSCIIDSEAVAWDRETKSILPFQKLSTRK--KKDVNEDEIKIQVCIYAFDLIYFNGQS 205
            S  SCIID E+V ++ ET  + PFQ +S R+  K ++ E   ++ + ++ FD++Y NG+S
Sbjct: 296  SFDSCIIDGESVPYNPETGELYPFQMVSKRRGRKYELTEKTREVPIVMFIFDILYLNGKS 355

Query: 206  LVKQSLKERRDILKENFVEKPGQFMLASSINSCTTDEISEFLEQSIKDKCEGLMIKTLDK 385
            LV     ERR IL++NF E    F LA  I S    +I +F E+SI++ CEG++ K+   
Sbjct: 356  LVNLPYPERRSILEKNFKENE-YFKLAKRIVSDDEHDIMKFFERSIEEGCEGIVAKSNGI 414

Query: 386  NATYQISQRSRXXXXXXXXXXXXXGDTVDLVVIGASFGTGKRANKYGTFLLGCYDPENDM 565
            ++ Y+   R                D++DLVV+GA  G G+R   +G  LL CY+ ++D 
Sbjct: 415  DSIYRAGARGWLWIKFKRDYQSELSDSLDLVVVGAFDGHGRRKGTFGALLLACYNSKDDT 474

Query: 566  YQTICKLGTGFSDEDLDNFYNQLRE-IATRRPDNYYDYDKTCKPDCWFDPKYVWEIKAAD 742
            ++T+CKLG+GF+DE L      L + I  ++P      + + +PD W  P  V EI+ A+
Sbjct: 475  FETVCKLGSGFTDEMLSEMPRLLGDKIVEKKPARV---NSSMEPDHWIYPSLVLEIRGAE 531

Query: 743  LSISPDHKAAVGLVDDEKGISLRFPRFIRVREDKKPEGATTSRQIAEMYRNQDSV 907
            +++SP H  A+ +++   G++LRFPR I+ R+DKKPE ATT+ +I EMY+ Q  V
Sbjct: 532  ITVSPVHTCAMNIIEKGSGLALRFPRLIKPRDDKKPEDATTTNEIIEMYKAQKKV 586
>sp|Q9HJ26|DNLI_THEAC DNA ligase (Polydeoxyribonucleotide synthase [ATP])
          Length = 588

 Score =  204 bits (520), Expect = 2e-52
 Identities = 111/292 (38%), Positives = 168/292 (57%), Gaps = 4/292 (1%)
 Frame = +2

Query: 35   VQSCIIDSEAVAWDRETKSILPFQKLSTRK--KKDVNEDEIKIQVCIYAFDLIYFNGQSL 208
            V S I+D EAV +D +T  + PFQ +S R+  K D+++   +I + ++ FD++Y NG+ L
Sbjct: 292  VDSAILDGEAVPYDPDTGELYPFQVISHRRGRKYDLDKVSSEIPITVFLFDIVYLNGRDL 351

Query: 209  VKQSLKERRDILKENFVEKPGQFMLASSINSCTTDEISEFLEQSIKDKCEGLMIKTLDKN 388
             K    ERR IL+  F E    F LA  I S    E+  F   +I+D CEGL+ K+   +
Sbjct: 352  SKTPYTERRKILESIFTESDS-FRLAKRIESGDPAEVHRFFNSAIEDGCEGLVAKSTSPD 410

Query: 389  ATYQISQRSRXXXXXXXXXXXXXGDTVDLVVIGASFGTGKRANKYGTFLLGCYDPENDMY 568
            + Y+   R                DT+DL V+GA +G G+R   YG  LL  Y+ +ND +
Sbjct: 411  SFYKAGARGWLWIKLKRDYQAQLWDTLDLTVVGAFYGHGRRKGTYGALLLATYNDKNDTF 470

Query: 569  QTICKLGTGFSDEDLDNFYNQLRE-IATRRPDNYYDYDKTCKPDCWFDPKYVWEIKAADL 745
            +T+CKLG+GFSD+ L +   +  + ++  +P          +PD WF P  V E+  A++
Sbjct: 471  ETVCKLGSGFSDDVLFSLPKKFEQYVSKEKPARVI---SNLEPDVWFYPAVVMEVIGAEI 527

Query: 746  SISPDHKAAVGLVDDEKGISLRFPRFI-RVREDKKPEGATTSRQIAEMYRNQ 898
            ++SP H  A G ++ + G+S+RFPRF  + REDKKPE +TTSR+I EMY+ Q
Sbjct: 528  TVSPIHTCAYGEIEKDSGLSVRFPRFTGKWREDKKPEDSTTSREILEMYKEQ 579
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,069,502
Number of Sequences: 369166
Number of extensions: 2152772
Number of successful extensions: 6187
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6083
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 9856975370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)