Planaria EST Database


DrC_01431

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01431
         (886 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q80XJ3|K1043_MOUSE  TPR repeat-containing protein KIAA1043      44   6e-04
sp|Q96AY4|K1043_HUMAN  TPR repeat-containing protein KIAA1043      44   8e-04
sp|P81274|GPSM2_HUMAN  G-protein signalling modulator 2 (Mos...    40   0.011
sp|P94415|RAPC_BACSU  Response regulator aspartate phosphata...    39   0.015
sp|Q8VDU0|GPSM2_MOUSE  G-protein signalling modulator 2 (Pin...    37   0.096
sp|O06917|Y263_METJA  Hypothetical protein MJ0263                  36   0.12 
sp|P49321|NASP_HUMAN  Nuclear autoantigenic sperm protein (N...    36   0.16 
sp|P27123|NASP_RABIT  Nuclear autoantigenic sperm protein (N...    36   0.16 
sp|P06180|HIBN_XENLA  Histone-binding protein N1/N2                34   0.62 
sp|Q6Q4D0|BRU1_ARATH  BRUSHY protein 1 (TONSOKU protein) (MG...    34   0.62 
>sp|Q80XJ3|K1043_MOUSE TPR repeat-containing protein KIAA1043
          Length = 1691

 Score = 43.9 bits (102), Expect = 6e-04
 Identities = 26/113 (23%), Positives = 52/113 (46%)
 Frame = +2

Query: 527 EMTQKISYLREALDYAREGEKKKLQGKCSYKLGMAYQEADKPDVAINYLMQYYNISKSIN 706
           E    + Y +  L  A E +    QG+    LG+ Y+     + A+ Y  Q+ +I+  +N
Sbjct: 247 EYDTALQYHQLDLQIAEETDNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMN 306

Query: 707 DDENFCIACDALAKVFRSQKKYEECIKYLEEFAECAERSLQKEAHSQACRALG 865
           D     ++  +L +   + + Y + + YL+E    AE+  ++E  ++    LG
Sbjct: 307 DLVAKTVSYSSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLG 359

 Score = 36.6 bits (83), Expect = 0.096
 Identities = 26/121 (21%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
 Frame = +2

Query: 533 TQKISYLREALDYAREGEKKKLQGKCSYKLGMAYQEADKPDVAINYLMQYYNISKSINDD 712
           T      +E L+  R+ ++  L+ +    +G+     +  + AI Y  Q   + + ++ +
Sbjct: 46  TMAFKCYQEQLELGRKLKEPSLEAQVYGNMGITKMNMNVMEDAIGYFEQQLAMLQQLSGN 105

Query: 713 ENFCI---ACDALAKVFRSQKKYEECIKYLEEFAECAERSLQKEAHSQACRALGDVYNHL 883
           E+      A   L   + +   YEE IKY E++   A+   + +  ++A R LG+ +   
Sbjct: 106 ESVLDRGRAYGNLGDCYEALGDYEEAIKYYEQYLSVAQSLNRMQDQAKAYRGLGNGHRAT 165

Query: 884 G 886
           G
Sbjct: 166 G 166
>sp|Q96AY4|K1043_HUMAN TPR repeat-containing protein KIAA1043
          Length = 1716

 Score = 43.5 bits (101), Expect = 8e-04
 Identities = 26/113 (23%), Positives = 51/113 (45%)
 Frame = +2

Query: 527 EMTQKISYLREALDYAREGEKKKLQGKCSYKLGMAYQEADKPDVAINYLMQYYNISKSIN 706
           E    + Y +  L  A E      QG+    LG+ Y+     + A+ Y  Q+ +I+  +N
Sbjct: 247 EYDTALQYHQLDLQIAEETNNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMN 306

Query: 707 DDENFCIACDALAKVFRSQKKYEECIKYLEEFAECAERSLQKEAHSQACRALG 865
           D     ++  +L +   + + Y + + YL+E    AE+  ++E  ++    LG
Sbjct: 307 DLAAKTVSYSSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLG 359

 Score = 37.0 bits (84), Expect = 0.073
 Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
 Frame = +2

Query: 533 TQKISYLREALDYAREGEKKKLQGKCSYKLGMAYQEADKPDVAINYLMQYYNISKSINDD 712
           T       E LD  ++ +   L+ +    +G+     +  + AI Y  Q   + + ++ +
Sbjct: 46  TMAFKCYEEQLDLGQKLKDPSLEAQVYGNMGITKMNMNVMEEAIGYFEQQLAMLQQLSGN 105

Query: 713 ENFCI---ACDALAKVFRSQKKYEECIKYLEEFAECAERSLQKEAHSQACRALGDVYNHL 883
           E+      A   L   + +   YEE IKY E++   A+   + +  ++A R LG+ +  +
Sbjct: 106 ESVLDRGRAYGNLGDCYEALGDYEEAIKYYEQYLSVAQSLNRMQDQAKAYRGLGNGHRAM 165

Query: 884 G 886
           G
Sbjct: 166 G 166
>sp|P81274|GPSM2_HUMAN G-protein signalling modulator 2 (Mosaic protein LGN)
          Length = 677

 Score = 39.7 bits (91), Expect = 0.011
 Identities = 31/144 (21%), Positives = 62/144 (43%)
 Frame = +2

Query: 455 EACEHLSNIRLEMSESFLDNFKNIEMTQKISYLREALDYAREGEKKKLQGKCSYKLGMAY 634
           +A E  +   L  +  FL  F+         Y ++ L  AR+ + + ++ +  Y LG  Y
Sbjct: 231 KAAERRAYSNLGNAYIFLGEFETAS-----EYYKKTLLLARQLKDRAVEAQSCYSLGNTY 285

Query: 635 QEADKPDVAINYLMQYYNISKSINDDENFCIACDALAKVFRSQKKYEECIKYLEEFAECA 814
                 + AI+Y +++  I++ +ND      AC +L   + +   +++ + + E+  E +
Sbjct: 286 TLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEIS 345

Query: 815 ERSLQKEAHSQACRALGDVYNHLG 886
                K     A   L D+   LG
Sbjct: 346 REVGDKSGELTARLNLSDLQMVLG 369

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 28/127 (22%), Positives = 54/127 (42%)
 Frame = +2

Query: 506 LDNFKNIEMTQKISYLREALDYAREGEKKKLQGKCSYKLGMAYQEADKPDVAINYLMQYY 685
           L NF++  +  +     + L  A+E   K  + +    LG AY    + + A  Y  +  
Sbjct: 208 LGNFRDAVIAHE-----QRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTL 262

Query: 686 NISKSINDDENFCIACDALAKVFRSQKKYEECIKYLEEFAECAERSLQKEAHSQACRALG 865
            +++ + D      +C +L   +   + YE+ I Y  +    A+    +    +AC +LG
Sbjct: 263 LLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLG 322

Query: 866 DVYNHLG 886
           + Y  LG
Sbjct: 323 NAYTALG 329
>sp|P94415|RAPC_BACSU Response regulator aspartate phosphatase C
          Length = 382

 Score = 39.3 bits (90), Expect = 0.015
 Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 2/219 (0%)
 Frame = +2

Query: 173 DYKGMYHSYFRLANFFKS-YPEDKWLVDHFFKYCWSVSKKIND-DENLKHAEANYYLGLA 346
           D KG+   Y    NFF+  Y  DK        Y     KK++   ++++ AE  + +  A
Sbjct: 95  DLKGLLDYY---VNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEA 151

Query: 347 IELNKDYEEAFQYFHTLYTLSKKQTWKNEHNVLLFIEACEHLSNIRLEMSESFLDNFKNI 526
               K       YF  +   +  + +  +    + I  C  +  + L    +F       
Sbjct: 152 YYYMKQ-----TYFSLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNF------- 199

Query: 527 EMTQKISYLREALDYAREGEKKKLQGKCSYKLGMAYQEADKPDVAINYLMQYYNISKSIN 706
              Q   + + AL+ A+  +K +L G+  Y LG+ Y   D  D AI+Y  +  +  +S  
Sbjct: 200 --EQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLDPAIDYFEKAVSTFESSR 257

Query: 707 DDENFCIACDALAKVFRSQKKYEECIKYLEEFAECAERS 823
              +   A   +  ++  Q K+++  +Y +   E A+ +
Sbjct: 258 IVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKET 296
>sp|Q8VDU0|GPSM2_MOUSE G-protein signalling modulator 2 (Pins homolog)
          Length = 672

 Score = 36.6 bits (83), Expect = 0.096
 Identities = 28/127 (22%), Positives = 54/127 (42%)
 Frame = +2

Query: 506 LDNFKNIEMTQKISYLREALDYAREGEKKKLQGKCSYKLGMAYQEADKPDVAINYLMQYY 685
           L NF++  +  +     + L  A+E   K  + +    LG AY    + + A  Y  +  
Sbjct: 208 LGNFRDAVIAHE-----QRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTL 262

Query: 686 NISKSINDDENFCIACDALAKVFRSQKKYEECIKYLEEFAECAERSLQKEAHSQACRALG 865
            +++ + D      +C +L   +   + YE+ I Y  +    A+    +    +AC +LG
Sbjct: 263 LLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLG 322

Query: 866 DVYNHLG 886
           + Y  LG
Sbjct: 323 NAYTALG 329
>sp|O06917|Y263_METJA Hypothetical protein MJ0263
          Length = 320

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 42/165 (25%), Positives = 63/165 (38%), Gaps = 16/165 (9%)
 Frame = +2

Query: 362 DYEEAFQYFHTLYTLSKKQTWKNEHNVLLFIEACEHLSNIRLEMSESFLDNFKNIE--MT 535
           +YE   +Y   L  LSK       H  L++IE  E      LE  + FL  + N+   + 
Sbjct: 95  EYERTLKYIEKLSRLSKPCYLSPFHKALIYIEFGEF--EKALEALDEFLKIYPNLTSILR 152

Query: 536 QKISYLR------EALDYAR--------EGEKKKLQGKCSYKLGMAYQEADKPDVAINYL 673
           QK S L       EALD           +     L+G+   KLG   +  D   +AIN  
Sbjct: 153 QKASILEILGKLDEALDCVNKILSIKKDDAHAWYLKGRILKKLGNIKEALDALKMAINL- 211

Query: 674 MQYYNISKSINDDENFCIACDALAKVFRSQKKYEECIKYLEEFAE 808
                       +EN       +A +  +   YEE + Y+ ++ E
Sbjct: 212 ------------NENLVHVYKDIAYLELANNNYEEALNYITKYLE 244
>sp|P49321|NASP_HUMAN Nuclear autoantigenic sperm protein (NASP)
          Length = 788

 Score = 35.8 bits (81), Expect = 0.16
 Identities = 38/185 (20%), Positives = 74/185 (40%), Gaps = 2/185 (1%)
 Frame = +2

Query: 41  QEKEREEAGPDSILWSMSPISMQEDKLTLLKDC-LSAAEDYYRIDDYKGMYHSYFRLANF 217
           QE E EE G   + W M  ++    K    K+  L AA+ + ++ +      +Y +    
Sbjct: 505 QENEEEEIGNLELAWDMLDLAKIIFKRQETKEAQLYAAQAHLKLGEVSVESENYVQAVEE 564

Query: 218 FKSYPEDKWLVDHFFKYCWSVSKKINDDENLKHAEANYYLGLAIELNKDYEEAF-QYFHT 394
           F+S              C ++ ++  +  +   AE +Y LGLA   N  Y+EA  Q+  +
Sbjct: 565 FQS--------------CLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFSKS 610

Query: 395 LYTLSKKQTWKNEHNVLLFIEACEHLSNIRLEMSESFLDNFKNIEMTQKISYLREALDYA 574
           +  +  +    NE        + E+   I               E+ + +  +RE ++ A
Sbjct: 611 IEVIENRMAVLNEQVKEAEGSSAEYKKEIE--------------ELKELLPEIREKIEDA 656

Query: 575 REGEK 589
           +E ++
Sbjct: 657 KESQR 661
>sp|P27123|NASP_RABIT Nuclear autoantigenic sperm protein (NASP)
          Length = 680

 Score = 35.8 bits (81), Expect = 0.16
 Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
 Frame = +2

Query: 44  EKEREEAGPDSILWSMSPISMQEDKLTLLKDC-LSAAEDYYRIDDYKGMYHSYFRLANFF 220
           E E EE G   + W M  ++    K    K+  L AA+ + ++ +      +Y +    F
Sbjct: 399 ENEEEEIGNLELAWDMLDLAKIIFKRQETKEAQLYAAQAHLKLGEVSVESQNYIQAVEEF 458

Query: 221 KSYPEDKWLVDHFFKYCWSVSKKINDDENLKHAEANYYLGLAIELNKDYEEAF-QYFHTL 397
           ++              C S+ ++  +  +   AE +Y LGLA   N  Y+EA  Q+  ++
Sbjct: 459 QA--------------CLSLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFSKSI 504

Query: 398 YTLSKKQTWKNE 433
             + K+    NE
Sbjct: 505 EVIEKRMAVLNE 516
>sp|P06180|HIBN_XENLA Histone-binding protein N1/N2
          Length = 590

 Score = 33.9 bits (76), Expect = 0.62
 Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
 Frame = +2

Query: 41  QEKEREEAGPDSILWSMSPISMQEDKLTLLKDC-LSAAEDYYRIDDYKGMYHSYFRLANF 217
           +E E E+ G   + W M  +     K    K+  L AA+ + ++ +      +Y +    
Sbjct: 320 KETEEEDVGNLQLAWEMLDLCKTIFKRQQSKEAQLKAAQAHQKLGEVCIESENYSQAVED 379

Query: 218 FKSYPEDKWLVDHFFKYCWSVSKKINDDENLKHAEANYYLGLAIELNKDYEEAFQYF 388
           F +              C ++ K+  ++ +   AE +Y+LGLA + +  +EEA  +F
Sbjct: 380 FLA--------------CLNIQKEHLEEHDRLLAETHYHLGLAYQYSSKHEEAISHF 422
>sp|Q6Q4D0|BRU1_ARATH BRUSHY protein 1 (TONSOKU protein) (MGOUN protein 3)
          Length = 1311

 Score = 33.9 bits (76), Expect = 0.62
 Identities = 21/114 (18%), Positives = 50/114 (43%)
 Frame = +2

Query: 542 ISYLREALDYAREGEKKKLQGKCSYKLGMAYQEADKPDVAINYLMQYYNISKSINDDENF 721
           ++  + A   A E   ++ Q + +  +G   +   +   A+ +    Y+IS      ++ 
Sbjct: 6   VAAAKRAYRKAEEVGDRREQARWANNVGDILKNHGEYVDALKWFRIDYDISVKYLPGKDL 65

Query: 722 CIACDALAKVFRSQKKYEECIKYLEEFAECAERSLQKEAHSQACRALGDVYNHL 883
              C +L +++   + +EE + Y ++  + AE +       +AC  LG  Y+ +
Sbjct: 66  LPTCQSLGEIYLRLENFEEALIYQKKHLQLAEEANDTVEKQRACTQLGRTYHEM 119
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,955,569
Number of Sequences: 369166
Number of extensions: 1589811
Number of successful extensions: 5630
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5620
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8838279920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)