Planaria EST Database


DrC_01420

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01420
         (851 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O14807|RASM_HUMAN  Ras-related protein M-Ras (Ras-related...   178   2e-44
sp|P97538|RASM_RAT  Ras-related protein M-Ras (Ras-related p...   177   3e-44
sp|O08989|RASM_MOUSE  Ras-related protein M-Ras (Ras-related...   176   7e-44
sp|P38976|RAS2_HYDMA  Ras-like protein RAS2                       160   3e-39
sp|O74650|RAS_CRYNE  Ras-like protein                             159   1e-38
sp|P04388|RAS2_DROME  Ras-like protein 2                          158   2e-38
sp|P08647|RAS_SCHPO  Ras-like protein 1                           156   6e-38
sp|P62070|RRAS2_HUMAN  Ras-related protein R-Ras2 (Ras-like ...   156   8e-38
sp|Q05058|RASL_COPCI  24 kDa RAS-like protein                     156   8e-38
sp|P22278|RAS1_RHIRA  Ras-like protein 1                          155   1e-37
>sp|O14807|RASM_HUMAN Ras-related protein M-Ras (Ras-related protein R-Ras3)
          Length = 208

 Score =  178 bits (451), Expect = 2e-44
 Identities = 93/190 (48%), Positives = 129/190 (67%)
 Frame = +3

Query: 42  LPSDLSNMAKMKXXXXXXXXXXKSAIILQFMQKIFVENHDPTIESTYYKNYEVDGEWSNL 221
           +PSD  N+   K          KSA+ +QF QKIFV ++DPTIE +Y K+ E+D +W+ L
Sbjct: 6   VPSD--NLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAIL 63

Query: 222 EVQDTAGQEEFAAMRESYYRTANGFLIVFSLTTRESFDMVRRFHKSALRSRDRDHFPMLL 401
           +V DTAGQEEF+AMRE Y RT +GFLIV+S+T + SF+ V RFH+  LR +DR+ FPM+L
Sbjct: 64  DVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMIL 123

Query: 402 VANKTDLESSRKVSPSEIEDLAKELQIDYTETSAKNPPVNIDDAFSQIVRKIRSHQLIND 581
           VANK DL   RK++  + +++A +  I Y ETSAK+PP+N+D AF  +VR IR  Q I +
Sbjct: 124 VANKVDLMHLRKITREQGKEMATKHNIPYIETSAKDPPLNVDKAFHDLVRVIR--QQIPE 181

Query: 582 VKTKSRPRQK 611
              K + + K
Sbjct: 182 KSQKKKKKTK 191
>sp|P97538|RASM_RAT Ras-related protein M-Ras (Ras-related protein R-Ras3)
          Length = 208

 Score =  177 bits (450), Expect = 3e-44
 Identities = 91/188 (48%), Positives = 126/188 (67%)
 Frame = +3

Query: 42  LPSDLSNMAKMKXXXXXXXXXXKSAIILQFMQKIFVENHDPTIESTYYKNYEVDGEWSNL 221
           +PSD  N+   K          KSA+ +QF QKIFV ++DPTIE +Y K+ E+D +W+ L
Sbjct: 6   VPSD--NLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAIL 63

Query: 222 EVQDTAGQEEFAAMRESYYRTANGFLIVFSLTTRESFDMVRRFHKSALRSRDRDHFPMLL 401
           +V DTAGQEEF+AMRE Y RT +GFLIV+S+T + SF+ V RFH+  LR +DR+ FPM+L
Sbjct: 64  DVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMIL 123

Query: 402 VANKTDLESSRKVSPSEIEDLAKELQIDYTETSAKNPPVNIDDAFSQIVRKIRSHQLIND 581
           VANK DL   RKV+  + +++A +  I Y ETSAK+PP+N+D  F  +VR IR      +
Sbjct: 124 VANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQQVPEKN 183

Query: 582 VKTKSRPR 605
            K K + +
Sbjct: 184 QKKKKKTK 191
>sp|O08989|RASM_MOUSE Ras-related protein M-Ras (Ras-related protein R-Ras3) (Muscle and
           microspikes Ras) (X-Ras)
          Length = 208

 Score =  176 bits (446), Expect = 7e-44
 Identities = 90/188 (47%), Positives = 126/188 (67%)
 Frame = +3

Query: 42  LPSDLSNMAKMKXXXXXXXXXXKSAIILQFMQKIFVENHDPTIESTYYKNYEVDGEWSNL 221
           +PS+  N+   K          KSA+ +QF QKIFV ++DPTIE +Y K+ E+D +W+ L
Sbjct: 6   VPSE--NLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAIL 63

Query: 222 EVQDTAGQEEFAAMRESYYRTANGFLIVFSLTTRESFDMVRRFHKSALRSRDRDHFPMLL 401
           +V DTAGQEEF+AMRE Y RT +GFLIV+S+T + SF+ V RFH+  LR +DR+ FPM+L
Sbjct: 64  DVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMIL 123

Query: 402 VANKTDLESSRKVSPSEIEDLAKELQIDYTETSAKNPPVNIDDAFSQIVRKIRSHQLIND 581
           VANK DL   RKV+  + +++A +  I Y ETSAK+PP+N+D  F  +VR IR      +
Sbjct: 124 VANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQQVPEKN 183

Query: 582 VKTKSRPR 605
            K K + +
Sbjct: 184 QKKKKKTK 191
>sp|P38976|RAS2_HYDMA Ras-like protein RAS2
          Length = 192

 Score =  160 bits (406), Expect = 3e-39
 Identities = 81/175 (46%), Positives = 122/175 (69%), Gaps = 1/175 (0%)
 Frame = +3

Query: 108 KSAIILQFMQKIFVENHDPTIESTYYKNYEVDGEWSNLEVQDTAGQEEFAAMRESYYRTA 287
           KSA+ +QF+Q  FV+++DPTIE +Y K   +D + ++L++ DTAGQEEF+AMR+ Y RT 
Sbjct: 21  KSALTIQFIQSHFVQDYDPTIEDSYRKQCVIDDKVAHLDILDTAGQEEFSAMRDEYMRTG 80

Query: 288 NGFLIVFSLTTRESFDMVRRFHKSALRSRDRDHFPMLLVANKTDLESSRKVSPSEIEDLA 467
            GFL+VFS+T R SFD + RFH   LR +D + FPM+LV NK+DLE+ R VS +E ++L 
Sbjct: 81  EGFLLVFSVTDRSSFDEIPRFHTQILRVKDIEEFPMILVGNKSDLENERTVSTAEAQELG 140

Query: 468 KELQIDYTETSAKNPPVNIDDAFSQIVRKIRSHQLINDVKTKS-RPRQKQKCCLM 629
           ++L++ Y E+SAK   +N+D AF  +VR IR+    N    +  R ++K + C++
Sbjct: 141 RKLKVSYLESSAKQ-RINVDAAFHDLVRAIRN---ANKASVEPLRKKEKSRRCIV 191
>sp|O74650|RAS_CRYNE Ras-like protein
          Length = 216

 Score =  159 bits (401), Expect = 1e-38
 Identities = 81/154 (52%), Positives = 108/154 (70%)
 Frame = +3

Query: 108 KSAIILQFMQKIFVENHDPTIESTYYKNYEVDGEWSNLEVQDTAGQEEFAAMRESYYRTA 287
           KSA+ +QF+Q  FV+ +DPTIE +Y K   +D E + L+V DTAGQEE+ AMRE Y RT 
Sbjct: 22  KSALTIQFIQSHFVDEYDPTIEDSYRKQCIIDEEVALLDVLDTAGQEEYGAMREQYMRTG 81

Query: 288 NGFLIVFSLTTRESFDMVRRFHKSALRSRDRDHFPMLLVANKTDLESSRKVSPSEIEDLA 467
            GFL+V+S+T+R SF+ V  FH+  LR +D+D+FP+++VANK DLE  R+V P E  DLA
Sbjct: 82  EGFLLVYSITSRSSFEEVSTFHQQILRVKDKDYFPVVVVANKCDLEYERQVQPHEGRDLA 141

Query: 468 KELQIDYTETSAKNPPVNIDDAFSQIVRKIRSHQ 569
           K       ETSAK   VN+D+AF  +VR IR +Q
Sbjct: 142 KRFNAQCIETSAKQ-RVNVDEAFIAVVRAIRRYQ 174
>sp|P04388|RAS2_DROME Ras-like protein 2
          Length = 192

 Score =  158 bits (400), Expect = 2e-38
 Identities = 81/176 (46%), Positives = 116/176 (65%), Gaps = 2/176 (1%)
 Frame = +3

Query: 108 KSAIILQFMQKIFVENHDPTIESTYYKNYEVDGEWSNLEVQDTAGQEEFAAMRESYYRTA 287
           KSAI +QF+Q  FV ++DPTIE +Y K   +D   + L++ DTAGQEEF+AMRE Y R+ 
Sbjct: 18  KSAITIQFIQSYFVTDYDPTIEDSYTKQCNIDDVPAKLDILDTAGQEEFSAMREQYMRSG 77

Query: 288 NGFLIVFSLTTRESFDMVRRFHKSALRSRDRDHFPMLLVANKTDLESSRKVSPSEIEDLA 467
            GFL+VF+L    SFD + +F +  LR +DRD FPML+V NK DL+  ++VS  E ++ +
Sbjct: 78  EGFLLVFALNDHSSFDEIPKFQRQILRVKDRDEFPMLMVGNKCDLKHQQQVSLEEAQNTS 137

Query: 468 KELQIDYTETSAKNPPVNIDDAFSQIVRKIRSHQLIND--VKTKSRPRQKQKCCLM 629
           + L I Y E SAK   VN+D AF ++VR +R  Q+     ++   + + K+KCCLM
Sbjct: 138 RNLMIPYIECSAK-LRVNVDQAFHELVRIVRKFQIAERPFIEQDYKKKGKRKCCLM 192
>sp|P08647|RAS_SCHPO Ras-like protein 1
          Length = 219

 Score =  156 bits (395), Expect = 6e-38
 Identities = 79/153 (51%), Positives = 111/153 (72%)
 Frame = +3

Query: 108 KSAIILQFMQKIFVENHDPTIESTYYKNYEVDGEWSNLEVQDTAGQEEFAAMRESYYRTA 287
           KSA+ +Q +Q  FV+ +DPTIE +Y K  E+DGE + L+V DTAGQEE++AMRE Y RT 
Sbjct: 21  KSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAGQEEYSAMREQYMRTG 80

Query: 288 NGFLIVFSLTTRESFDMVRRFHKSALRSRDRDHFPMLLVANKTDLESSRKVSPSEIEDLA 467
            GFL+V+++T+R SFD +  F++  LR +D+D FP++LVANK DLE+ R VS +E E LA
Sbjct: 81  EGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEAERVVSRAEGEQLA 140

Query: 468 KELQIDYTETSAKNPPVNIDDAFSQIVRKIRSH 566
           K +   Y ETSAK   +N+++AF  +VR IR +
Sbjct: 141 KSMHCLYVETSAK-LRLNVEEAFYSLVRTIRRY 172
>sp|P62070|RRAS2_HUMAN Ras-related protein R-Ras2 (Ras-like protein TC21) (Teratocarcinoma
           oncogene)
 sp|P62071|RRAS2_MOUSE Ras-related protein R-Ras2
          Length = 204

 Score =  156 bits (394), Expect = 8e-38
 Identities = 82/189 (43%), Positives = 117/189 (61%)
 Frame = +3

Query: 51  DLSNMAKMKXXXXXXXXXXKSAIILQFMQKIFVENHDPTIESTYYKNYEVDGEWSNLEVQ 230
           D S   K +          KSA+ +QF+Q  FV ++DPTIE +Y K   +D   + L++ 
Sbjct: 8   DGSGQEKYRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDIL 67

Query: 231 DTAGQEEFAAMRESYYRTANGFLIVFSLTTRESFDMVRRFHKSALRSRDRDHFPMLLVAN 410
           DTAGQEEF AMRE Y RT  GFL+VFS+T R SF+ + +F +  LR +DRD FPM+L+ N
Sbjct: 68  DTAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGN 127

Query: 411 KTDLESSRKVSPSEIEDLAKELQIDYTETSAKNPPVNIDDAFSQIVRKIRSHQLINDVKT 590
           K DL+  R+V+  E + LA++L++ Y E SAK   +N+D AF ++VR IR  Q   +   
Sbjct: 128 KADLDHQRQVTQEEGQQLARQLKVTYMEASAK-IRMNVDQAFHELVRVIRKFQ-EQECPP 185

Query: 591 KSRPRQKQK 617
              P +K+K
Sbjct: 186 SPEPTRKEK 194
>sp|Q05058|RASL_COPCI 24 kDa RAS-like protein
          Length = 215

 Score =  156 bits (394), Expect = 8e-38
 Identities = 78/153 (50%), Positives = 109/153 (71%)
 Frame = +3

Query: 108 KSAIILQFMQKIFVENHDPTIESTYYKNYEVDGEWSNLEVQDTAGQEEFAAMRESYYRTA 287
           KSA+ +QF+Q  FV+ +DPTIE +Y K   +D E + L+V DTAGQEE+ AMRE Y RT 
Sbjct: 23  KSALTIQFIQSHFVDEYDPTIEDSYRKQCIIDDEVALLDVLDTAGQEEYGAMREQYMRTG 82

Query: 288 NGFLIVFSLTTRESFDMVRRFHKSALRSRDRDHFPMLLVANKTDLESSRKVSPSEIEDLA 467
            GFL+V+S+T+R SF+ +  FH+  LR +D+D FP+++VANK DLE  R+V  +E  DLA
Sbjct: 83  EGFLLVYSITSRNSFEEISIFHQQILRVKDQDSFPVIVVANKCDLEYERQVGMNEGRDLA 142

Query: 468 KELQIDYTETSAKNPPVNIDDAFSQIVRKIRSH 566
           K     + ETSAK   +N+D+AFS +VR+IR +
Sbjct: 143 KHFGCKFIETSAKQ-RINVDEAFSNLVREIRKY 174
>sp|P22278|RAS1_RHIRA Ras-like protein 1
          Length = 203

 Score =  155 bits (392), Expect = 1e-37
 Identities = 80/181 (44%), Positives = 115/181 (63%), Gaps = 7/181 (3%)
 Frame = +3

Query: 108 KSAIILQFMQKIFVENHDPTIESTYYKNYEVDGEWSNLEVQDTAGQEEFAAMRESYYRTA 287
           KSA+ +QF+Q  FV+ +DPTIE +Y K   +D E + L+V DTAGQEE++AMRE Y R  
Sbjct: 23  KSALTIQFIQSHFVDEYDPTIEDSYRKQCVIDSETALLDVLDTAGQEEYSAMREQYMRNG 82

Query: 288 NGFLIVFSLTTRESFDMVRRFHKSALRSRDRDHFPMLLVANKTDLESSRKVSPSEIEDLA 467
            GFL+V+S+T+R SF+ +  F++   R +DRD+FPM+LV NK DLE  R+VS  E  DLA
Sbjct: 83  EGFLLVYSITSRLSFEEITTFYQQICRVKDRDYFPMVLVGNKCDLEGDRQVSSQEGRDLA 142

Query: 468 KELQIDYTETSAKNPPVNIDDAFSQIVRKIRSHQLINDVKTKSR-------PRQKQKCCL 626
           K     + ETSAK   +N+D+AF ++VR IR +    + +   +            KCC+
Sbjct: 143 KNFGCQFIETSAKQ-RINVDEAFFEVVRDIRRYNKEQETRGHDQFGIQDAPDVASDKCCI 201

Query: 627 M 629
           +
Sbjct: 202 L 202
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,394,103
Number of Sequences: 369166
Number of extensions: 1914524
Number of successful extensions: 5280
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5055
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8390082510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)