Planaria EST Database


DrC_01407

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01407
         (561 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q60FC2|CFDP1_TRAJA  Craniofacial development protein 1 (B...    89   6e-18
sp|Q4ADK7|CFDP1_CAMDR  Craniofacial development protein 1 (B...    88   1e-17
sp|Q9UEE9|CFDP1_HUMAN  Craniofacial development protein 1 (B...    87   3e-17
sp|Q8HXY9|CFDP1_BOVIN  Craniofacial development protein 1 (B...    87   3e-17
sp|Q4ADK4|CFDP1_MUNRE  Craniofacial development protein 1 (B...    87   4e-17
sp|Q75QI0|CFDP1_CHICK  Craniofacial development protein 1 (B...    84   2e-16
sp|P38326|SWC5_YEAST  SWR1-complex protein 5                       45   2e-04
sp|Q9MTH5|YCF1_OENHO  Hypothetical 287.9 kDa protein ycf1          43   6e-04
sp|O14974|MYPT1_HUMAN  Protein phosphatase 1 regulatory subu...    39   0.009
sp|P39730|IF2P_YEAST  Eukaryotic translation initiation fact...    39   0.009
>sp|Q60FC2|CFDP1_TRAJA Craniofacial development protein 1 (Bucentaur) (h-type BCNT
           protein)
          Length = 298

 Score = 89.4 bits (220), Expect = 6e-18
 Identities = 63/197 (31%), Positives = 95/197 (48%), Gaps = 50/197 (25%)
 Frame = +1

Query: 73  QTAEEKEKNEKQLWESFKTDV----------------EKEKSLPAKISEKSEQDKTKEDI 204
           ++ + ++K E +LW SF  DV                E E++  + + +  EQ+K KE  
Sbjct: 101 ESEDARKKKEDELWASFLNDVGPKSKVPPSTPVKTGEETEETSSSNLVKAEEQEKPKET- 159

Query: 205 IEKTKVNFVSSNATPNLKLLTQKRPA----------------------------AAAGLS 300
            EK K+  V   A   +++  +  P                             A +GL 
Sbjct: 160 -EKVKITKVFDFAGEEVRVTKEVDPTSKEAKSFFKQSEKEKPQPNVPSAVSSLPAGSGLK 218

Query: 301 ----LGNILGQ--NKKPKQNMLQKSKEDWDKFVDEEGIKNDLKIFNRGKHGFLERKAFEA 462
               + ++LG+   KK K + L+KSK DW+ F +EEGI  +L I NRGK G++ERKAF  
Sbjct: 219 RSSGMSSLLGKIGAKKQKMSTLEKSKLDWENFKEEEGIAEELAIHNRGKEGYIERKAFLD 278

Query: 463 RTELKQYEIERDLRLQK 513
           R + +Q+EIERDLRL K
Sbjct: 279 RVDHRQFEIERDLRLSK 295
>sp|Q4ADK7|CFDP1_CAMDR Craniofacial development protein 1 (Bucentaur)
          Length = 297

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 63/193 (32%), Positives = 91/193 (47%), Gaps = 49/193 (25%)
 Frame = +1

Query: 82  EEKEKNEKQLWESFKTDVEKEKSLPAKISEKSEQDK---------TKEDIIEKTK----- 219
           + ++K E +LW SF  DV  +  +P     K E++           K + +EK K     
Sbjct: 102 DARKKKEDELWASFLNDVGPKSKVPPSTQVKREEETEETGSSKLLVKAEELEKPKETEKV 161

Query: 220 ------------------VNFVSSNATPNLKLLTQKRPA-----------AAAGLS---- 300
                             V+  S  A    K   +++P            A +GL     
Sbjct: 162 KITKVFDFAGEEVRVTKEVDATSKEAKSFFKQNEKEKPQTNVPAALPSLPAGSGLKRSSG 221

Query: 301 LGNILGQ--NKKPKQNMLQKSKEDWDKFVDEEGIKNDLKIFNRGKHGFLERKAFEARTEL 474
           + N+LG+   KK K + L+KSK DW+ F +EEGI  +L I NRGK G++ERKAF  R + 
Sbjct: 222 MSNLLGKIGAKKQKMSTLEKSKLDWESFKEEEGIGEELAIHNRGKEGYIERKAFLDRVDH 281

Query: 475 KQYEIERDLRLQK 513
           +Q+EIERDLRL K
Sbjct: 282 RQFEIERDLRLSK 294
>sp|Q9UEE9|CFDP1_HUMAN Craniofacial development protein 1 (Bucentaur)
          Length = 299

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 62/172 (36%), Positives = 97/172 (56%), Gaps = 2/172 (1%)
 Frame = +1

Query: 4   EVSQESDLEEYKSNKNIKTVLPEQTAEEKEKNEKQLWESFKTDVEKEKSLPAKISEKSEQ 183
           +V +  + EE  S+K +  V  E+  + KE  + ++ + F    E E  +  ++   S++
Sbjct: 132 QVKKGEETEETSSSKLL--VKAEELEKPKETEKVKITKVFDFAGE-EVRVTKEVDATSKE 188

Query: 184 DKT--KEDIIEKTKVNFVSSNATPNLKLLTQKRPAAAAGLSLGNILGQNKKPKQNMLQKS 357
            K+  K++  EK + N  S  A P+L   +  + ++     LG I    KK K + L+KS
Sbjct: 189 AKSFFKQNEKEKPQANVPS--ALPSLPAGSGLKRSSGMSSLLGKIGA--KKQKMSTLEKS 244

Query: 358 KEDWDKFVDEEGIKNDLKIFNRGKHGFLERKAFEARTELKQYEIERDLRLQK 513
           K DW+ F +EEGI  +L I NRGK G++ERKAF  R + +Q+EIERDLRL K
Sbjct: 245 KLDWESFKEEEGIGEELAIHNRGKEGYIERKAFLDRVDHRQFEIERDLRLSK 296
>sp|Q8HXY9|CFDP1_BOVIN Craniofacial development protein 1 (Bucentaur) (h-type BCNT
           protein)
          Length = 297

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 48/195 (24%)
 Frame = +1

Query: 73  QTAEEKEKNEKQLWESFKTDVEKEKSLP----AKISEKSEQDKT----KEDIIEKTK--- 219
           ++ + ++K E +LW SF  DV  +  +P     K  E++E+  +    K + +EK K   
Sbjct: 100 ESEDARKKKEDELWASFLNDVGPKSKVPPSTHVKTGEETEETSSSHLVKAERLEKPKETE 159

Query: 220 --------------------VNFVSSNATPNLKLLTQKRPA-----------AAAGLS-- 300
                               V+  S  A    K   +++P            A +GL   
Sbjct: 160 KVKITKVFDFAGEEVRVIKEVDATSKEAKSFFKQNEKEKPQSNVPPAVPSLPAGSGLKRS 219

Query: 301 --LGNILGQ--NKKPKQNMLQKSKEDWDKFVDEEGIKNDLKIFNRGKHGFLERKAFEART 468
             + ++LG+   KK K + L+KSK DW+ F +EEGI  +L I NRGK G++ERKAF  R 
Sbjct: 220 SGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEEEGIGEELAIHNRGKEGYIERKAFLDRV 279

Query: 469 ELKQYEIERDLRLQK 513
           + +Q+EIERDLRL K
Sbjct: 280 DHRQFEIERDLRLSK 294
>sp|Q4ADK4|CFDP1_MUNRE Craniofacial development protein 1 (Bucentaur)
          Length = 298

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 49/198 (24%)
 Frame = +1

Query: 73  QTAEEKEKNEKQLWESFKTDVEKEKSLPA----------------------KISEKSEQD 186
           ++ + ++K E +LW SF  DV  +  +P                       K+ +  E +
Sbjct: 101 ESEDARKKKEDELWASFLNDVGPKSKVPPSTHVKTGEETEETSSSHLVKAEKLEKPQETE 160

Query: 187 KTK---------EDIIEKTKVNFVSSNATPNLKLLTQKRP-----------AAAAGLS-- 300
           K K         E++    +V+  S  A    K   +++P           +A +GL   
Sbjct: 161 KVKITKVFDFAGEEVRVIKEVDATSKEAKSFFKQNEKEKPQSNISSSVPSLSAGSGLKRS 220

Query: 301 --LGNILGQ--NKKPKQNMLQKSKEDWDKFVDEEGIKNDLKIFNRGKHGFLERKAFEART 468
             + ++LG+   KK K + L+KSK DW+ F +EEGI  +L I NRGK G++ERKAF  R 
Sbjct: 221 SGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEEEGIGEELAIHNRGKEGYIERKAFLDRV 280

Query: 469 ELKQYEIERDLRL-QKKP 519
           + +Q+EIERDLRL Q KP
Sbjct: 281 DHRQFEIERDLRLSQMKP 298
>sp|Q75QI0|CFDP1_CHICK Craniofacial development protein 1 (Bucentaur)
          Length = 290

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 44/215 (20%)
 Frame = +1

Query: 1   LEVSQESDLEEYKSNKNIKTVLPEQTAEEKEKNEKQLWESFKTDVEKEKSLPA------- 159
           ++  +E   +E +  ++      +   EE++K E  LW SF +DV ++    A       
Sbjct: 73  VDEKEEGKAQENEDEEDDLKQSEKDREEEEKKKEDALWASFLSDVGQKPKAAATQATHAD 132

Query: 160 ---------------KISEKSEQ----------DKTKEDIIEKTKVNFVSSNATPNLKLL 264
                          K SEK +           D   E++    +V+  S  A   LK  
Sbjct: 133 KAGEVKSVNKLQGKPKESEKPKDSGRVTITKVFDFAGEEVRVTKEVDSSSKEAKSFLKQQ 192

Query: 265 TQKRPAAAAGL----------SLGNILGQ--NKKPKQNMLQKSKEDWDKFVDEEGIKNDL 408
            + + +A   L           + ++LG+  +KK K + L+KSK DW+ F +EEGI  +L
Sbjct: 193 EKWQSSAPGSLPTVSGVKRPSGISSLLGKIGSKKQKMSTLEKSKLDWENFKEEEGIVEEL 252

Query: 409 KIFNRGKHGFLERKAFEARTELKQYEIERDLRLQK 513
            I NRGK G++ERKAF  R + +Q+EIERD+RL +
Sbjct: 253 AIHNRGKDGYIERKAFLERVDHRQFEIERDIRLSR 287
>sp|P38326|SWC5_YEAST SWR1-complex protein 5
          Length = 303

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 25/71 (35%), Positives = 39/71 (54%)
 Frame = +1

Query: 301 LGNILGQNKKPKQNMLQKSKEDWDKFVDEEGIKNDLKIFNRGKHGFLERKAFEARTELKQ 480
           L  I+    +PK   L+KS+ DW  +VD  G+ ++L + N  K GFL R+ F  R    +
Sbjct: 223 LEQIISGGLRPKLTTLEKSQLDWASYVDRAGLNDELVLHN--KDGFLARQEFLQRVGSAE 280

Query: 481 YEIERDLRLQK 513
            E  ++LR Q+
Sbjct: 281 DERYKELRRQQ 291
>sp|Q9MTH5|YCF1_OENHO Hypothetical 287.9 kDa protein ycf1
          Length = 2434

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 36/149 (24%), Positives = 74/149 (49%), Gaps = 10/149 (6%)
 Frame = +1

Query: 1    LEVSQESDLEEYKSN--KNIKTVLPEQTAEEKEKNEKQLWESFKTDVEKEKSLPAKISEK 174
            +E  ++ ++E++K    K ++     + A++K +NEK+  E+ +  +EKEK    +  EK
Sbjct: 2045 IEKKRQKEIEKHKRKIEKQMRKKEKIENAKKKIENEKKKIETEEEKLEKEKRKKERKKEK 2104

Query: 175  SEQDKTKEDIIEKTKVNFVSSNATPNLKLLTQKRPAAAAGLSLGNILGQNKKPKQNMLQK 354
             ++   K   IEK K N V+ N   N++ L ++R    A L   +   + K+ ++  +Q+
Sbjct: 2105 LKKKVAKN--IEKLK-NKVAKNVAKNIEKLKKQRAKNIARLEEEDKKARKKRKRKVQVQE 2161

Query: 355  SK--------EDWDKFVDEEGIKNDLKIF 417
            +K        + W + + E     D++ F
Sbjct: 2162 NKILYTAFGSDKWQRPIAEYPKSGDIRNF 2190
>sp|O14974|MYPT1_HUMAN Protein phosphatase 1 regulatory subunit 12A (Myosin phosphatase
            targeting subunit 1) (Myosin phosphatase target subunit
            1) (Protein phosphatase myosin-binding subunit)
          Length = 1030

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
 Frame = +1

Query: 19   SDLEEYKSN--KNIKTVLPEQTAEEKEKNEKQLWESFKTDVEKEKSLPAKISEKSEQDKT 192
            +DL+E +    ++  T   EQ  EEKEK EK+  +  K + +KE     +   K +  +T
Sbjct: 702  TDLQEAEKTIGRSRSTRTREQENEEKEKEEKEKQDKEKQEEKKESETSREDEYKQKYSRT 761

Query: 193  KEDIIEKTKVNFVSSNATPNLKLLTQ----------KRPAAAAGLSLGNILGQNKKPKQ- 339
             ++  ++ +    SS+ TP+  L T            RP +  G++     G  K+ ++ 
Sbjct: 762  YDETYQRYRPVSTSSSTTPSSSLSTMSSSLYASSQLNRPNSLVGITSAYSRGITKENERE 821

Query: 340  -NMLQKSKEDWDK 375
                ++ KE  DK
Sbjct: 822  GEKREEEKEGEDK 834
>sp|P39730|IF2P_YEAST Eukaryotic translation initiation factor 5B (eIF-5B) (Translation
           initiation factor IF-2)
          Length = 1002

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
 Frame = +1

Query: 52  IKTVLPEQTAEEKEKNEKQLWESFKTDVEKEKSLPAKISEKSEQDKTKEDIIEKTKVNFV 231
           +K  L EQ   E+E+ E+   E  +    +EK      + K E++K K +   K +   +
Sbjct: 179 LKKQLEEQEKLEREEEERLEKEEEERLANEEKMKEEAKAAKKEKEKAKREK-RKAEGKLL 237

Query: 232 SSNATPNLKLLTQKRPAAAAGLSLGNIL--------GQNKKPKQNMLQKSKEDWDKFVDE 387
           +       KLL ++R   AA LS GN+         G+  KPK+ +  K K+   +    
Sbjct: 238 TRKQKEEKKLLERRR---AALLSSGNVKVAGLAKKDGEENKPKKVVYSKKKKRTTQENAS 294

Query: 388 EGIKNDLK 411
           E IK+D K
Sbjct: 295 EAIKSDSK 302

 Score = 38.1 bits (87), Expect = 0.015
 Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
 Frame = +1

Query: 13  QESDLEEYKSNKNIKTVLPEQTAEEKEKNEKQLWE----------SFKTDVEKEKSLPAK 162
           QE  + E K  K+ K +L  +  +EKEK EK+  +            +   EK K L  +
Sbjct: 73  QEKKVIEEK--KDGKPILKSKKEKEKEKKEKEKQKKKEQAARKKAQQQAQKEKNKELNKQ 130

Query: 163 ISEKSEQDKTKEDIIEKTKVNFVSSNATPNLKLLTQKRPAAAAGLSLGNILGQNKKPKQN 342
             EK+  +K   +  +K+K    S   + + K   +K PA  A L     L + +  +Q 
Sbjct: 131 NVEKAAAEKAAAEKSQKSKGE--SDKPSASAKKPAKKVPAGLAALRRQLEL-KKQLEEQE 187

Query: 343 MLQKSKEDWDKFVDEEGIKNDLKIFNRGKHGFLERKAFEARTELKQYEIERDLRLQKKPN 522
            L++ +E+  +  +EE + N+ K+    K    E++  +A+ E ++ E +   R QK+  
Sbjct: 188 KLEREEEERLEKEEEERLANEEKMKEEAKAAKKEKE--KAKREKRKAEGKLLTRKQKEEK 245

Query: 523 K 525
           K
Sbjct: 246 K 246
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,995,785
Number of Sequences: 369166
Number of extensions: 980577
Number of successful extensions: 5071
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4990
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 4029688280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)