Planaria EST Database


DrC_01385

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01385
         (362 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ZDZ6|Y167_RICPR  Hypothetical protein RP167                   40   0.002
sp|Q9HE88|SEC8_NEUCR  Probable exocyst complex component sec8      30   1.3  
sp|Q9IA27|HXA10_HETFR  Homeobox protein Hox-A10                    30   1.3  
sp|Q92794|MYST3_HUMAN  Histone acetyltransferase MYST3 (MYST...    29   3.0  
sp|P80220|T22D3_PIG  TSC22 domain family protein 3 (Glucocor...    28   5.1  
sp|Q9EQZ1|T22D3_RAT  TSC22 domain family protein 3 (Glucocor...    28   5.1  
sp|P24851|TALA_POVBO  Large T antigen                              28   5.1  
sp|P33948|ERD2_PLAFA  ER lumen protein retaining receptor >g...    28   6.6  
sp|Q9Z2S7|T22D3_MOUSE  TSC22 domain family protein 3 (Glucoc...    28   6.6  
sp|Q8PXD4|Y1287_METMA  Hypothetical UPF0313 protein MM1287         28   6.6  
>sp|Q9ZDZ6|Y167_RICPR Hypothetical protein RP167
          Length = 78

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 20/43 (46%), Positives = 25/43 (58%)
 Frame = +1

Query: 190 VEKEPLEKYSNNTNPLTGEVEGPRGPEPTRYGDWERKGRCIDF 318
           VE+E L K          E+ G +G EPTRYGDW+ KG+  DF
Sbjct: 44  VEEENLSKEK--------EIGGIKGLEPTRYGDWQHKGKVTDF 78
>sp|Q9HE88|SEC8_NEUCR Probable exocyst complex component sec8
          Length = 1111

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +1

Query: 169 SDKYQPYVEKEPLEKYSNNTNPLTGEVEGPRGPEPTRYGDWERKG 303
           +D Y PY +  P ++Y  +TNP +      R   P R     R G
Sbjct: 25  NDDYDPYGDGYPSDRYGTSTNPASRPSTASRNAPPPRSAQRGRTG 69
>sp|Q9IA27|HXA10_HETFR Homeobox protein Hox-A10
          Length = 271

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +1

Query: 85  HLSKVNHSKDLKKAVTPLGKHDSPVESESDKYQPYVEKEPLEKYSNNTNPLTGE 246
           HL+  +  ++ + A +   +  SPV SES+K  P  E +   K  N  N LT +
Sbjct: 142 HLTCSSEREEAEAAASSANEESSPVPSESNKNSPEKETKGEVKAENGANWLTAK 195
>sp|Q92794|MYST3_HUMAN Histone acetyltransferase MYST3 (MYST protein 3) (MOZ, YBF2/SAS3,
            SAS2 and TIP60 protein 3) (Runt-related transcription
            factor binding protein 2) (Monocytic leukemia zinc finger
            protein) (Zinc finger protein 220)
          Length = 2004

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
 Frame = +1

Query: 136  LGKHDSPVESESDKYQPYVEKEPLEKYSNNTNPLTGEV----EGPRGPEPTRYGDWERKG 303
            +GK  S    E D Y    EK+P      ++  L+ +V      P   +P+R G W RK 
Sbjct: 813  VGKSVSHENKEQDSYSVESEKKPEVMAPVSSTRLSKQVLPHDSLPANSQPSRRGRWGRKN 872

Query: 304  RCIDF*FGFYD 336
            R     FG  D
Sbjct: 873  RKTQERFGDKD 883
>sp|P80220|T22D3_PIG TSC22 domain family protein 3 (Glucocorticoid-induced leucine
           zipper protein) (Delta sleep-inducing peptide
           immunoreactor) (DSIP-immunoreactive peptide) (DIP
           protein)
          Length = 77

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +1

Query: 115 LKKAVTPLGKHDSPVESESDKYQPYVEKEPLEKYSNNTNPLTGEVEGPRGPE 270
           LK+ +  L + +S +E E+   +     E LEK+ +  +P     E P  PE
Sbjct: 19  LKEQIRELVEKNSQLERENTLLKTLASPEQLEKFQSRLSPEEPAPETPEAPE 70
>sp|Q9EQZ1|T22D3_RAT TSC22 domain family protein 3 (Glucocorticoid-induced leucine
           zipper protein)
          Length = 134

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +1

Query: 115 LKKAVTPLGKHDSPVESESDKYQPYVEKEPLEKYSNNTNPLTGEVEGPRGPE 270
           LK+ +  L + +S +E E+   +     E LEK+ +  +P     E P  PE
Sbjct: 76  LKEQIRELVEKNSQLERENTLLKTLASPEQLEKFQSRLSPEEPAPEAPETPE 127
>sp|P24851|TALA_POVBO Large T antigen
          Length = 586

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -1

Query: 326 PN*KSMQRPLRSQSPYRVGSGPLGPSTSPVNGLVLFEYFSNGSF 195
           P+    + P  SQ+P    + P  P TSP    VL EY SN  F
Sbjct: 68  PSDNEEENPAGSQAPGSQATPPKKPRTSPDFPEVLKEYVSNALF 111
>sp|P33948|ERD2_PLAFA ER lumen protein retaining receptor
 sp|Q76NM1|ERD2_PLAF7 ER lumen protein retaining receptor
          Length = 221

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 21/62 (33%), Positives = 31/62 (50%)
 Frame = -3

Query: 345 FILIIKSKLEINATSFALPISISCRFRTSWTLNFSC*WIGII*ILFQWFFFYIWLIFITF 166
           +ILI+K K   N       I ISCR +  + + F C +I    + F +  FY  ++ ITF
Sbjct: 17  YILIMKLKKSKNC------IGISCRMQELYLIVFLCRYID---LFFVFVSFYNTVMKITF 67

Query: 165 TL 160
            L
Sbjct: 68  IL 69
>sp|Q9Z2S7|T22D3_MOUSE TSC22 domain family protein 3 (Glucocorticoid-induced leucine
           zipper protein) (TSC22-related inducible leucine zipper
           3) (Tilz3)
          Length = 137

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +1

Query: 115 LKKAVTPLGKHDSPVESESDKYQPYVEKEPLEKYSNNTNPLTGEVEGPRGPE 270
           LK+ +  L + +S +E E+   +     E LEK+ +  +P     E P  PE
Sbjct: 76  LKEQIRELLEKNSQLERENTLLKTLASPEQLEKFQSRLSPEEPAPEAPETPE 127
>sp|Q8PXD4|Y1287_METMA Hypothetical UPF0313 protein MM1287
          Length = 626

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
 Frame = +1

Query: 241 GEVEGPRGPEPTRYG----DWERKGRCID 315
           G + G  GP    YG     WE+KG C+D
Sbjct: 374 GIINGVGGPTANMYGMECRSWEKKGACLD 402
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,797,880
Number of Sequences: 369166
Number of extensions: 732118
Number of successful extensions: 2168
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2168
length of database: 68,354,980
effective HSP length: 87
effective length of database: 52,283,035
effective search space used: 1725340155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)