Planaria EST Database


DrC_01321

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01321
         (758 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P11974|KPYM_RABIT  Pyruvate kinase, isozymes M1/M2 (Pyruv...   349   5e-96
sp|P00548|KPYK_CHICK  Pyruvate kinase, muscle isozyme             348   9e-96
sp|Q92122|KPYK_XENLA  Pyruvate kinase, muscle isozyme (Cytos...   347   2e-95
sp|P52480|KPYM_MOUSE  Pyruvate kinase, isozyme M2                 347   3e-95
sp|P14618|KPYM_HUMAN  Pyruvate kinase, isozymes M1/M2 (Pyruv...   344   1e-94
sp|P11979|KPYM_FELCA  Pyruvate kinase, isozyme M1 (Pyruvate ...   344   2e-94
sp|P11980|KPYM_RAT  Pyruvate kinase, isozymes M1/M2 (Pyruvat...   343   3e-94
sp|O62619|KPYK_DROME  Pyruvate kinase (PK)                        317   3e-86
sp|P30613|KPYR_HUMAN  Pyruvate kinase, isozymes R/L (R-type/...   304   2e-82
sp|P12928|KPYR_RAT  Pyruvate kinase, isozymes R/L (L-PK)          291   2e-78
>sp|P11974|KPYM_RABIT Pyruvate kinase, isozymes M1/M2 (Pyruvate kinase muscle isozyme)
          Length = 531

 Score =  349 bits (895), Expect = 5e-96
 Identities = 177/254 (69%), Positives = 205/254 (80%), Gaps = 3/254 (1%)
 Frame = +2

Query: 5   IARSHLEYICNLDIDSEPDVVRSSSIICTIGPACRNVNTLKKMIASGMNIARMNFSHGSH 184
           +A + LE++C LDIDS P   R++ IICTIGPA R+V TLK+MI SGMN+ARMNFSHG+H
Sbjct: 22  MADTFLEHMCRLDIDSAPITARNTGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTH 81

Query: 185 EYHAETIKLVREAVETFTP---YYRPVALALDTKGPEIRTGLINGSATAEISLIKGNKIK 355
           EYHAETIK VR A E+F      YRPVA+ALDTKGPEIRTGLI GS TAE+ L KG  +K
Sbjct: 82  EYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLK 141

Query: 356 MVIDEKYAEACNEEILWVDYKNIVKILNPGCRIYVDDGLISLIVQEKGPDFLDCEVENGG 535
           + +D  Y E C+E ILW+DYKNI K+++ G ++YVDDGLISL V++KGPDFL  EVENGG
Sbjct: 142 ITLDNAYMEKCDENILWLDYKNICKVVDVGSKVYVDDGLISLQVKQKGPDFLVTEVENGG 201

Query: 536 KLGSKKGVNLPGAKVDLPAVSDKDISDLHFGVEQGVDMVFASFIRCGAAVDEIRSILGEK 715
            LGSKKGVNLPGA VDLPAVS+KDI DL FGVEQ VDMVFASFIR  A V E+R ILGEK
Sbjct: 202 FLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKAADVHEVRKILGEK 261

Query: 716 GKHILIISKIENHE 757
           GK+I IISKIENHE
Sbjct: 262 GKNIKIISKIENHE 275
>sp|P00548|KPYK_CHICK Pyruvate kinase, muscle isozyme
          Length = 530

 Score =  348 bits (893), Expect = 9e-96
 Identities = 172/254 (67%), Positives = 206/254 (81%), Gaps = 3/254 (1%)
 Frame = +2

Query: 5   IARSHLEYICNLDIDSEPDVVRSSSIICTIGPACRNVNTLKKMIASGMNIARMNFSHGSH 184
           +A + LE++C LDIDSEP + R++ IICTIGPA R+V+ LK+MI SGMN+AR+NFSHG+H
Sbjct: 21  MADTFLEHMCRLDIDSEPTIARNTGIICTIGPASRSVDKLKEMIKSGMNVARLNFSHGTH 80

Query: 185 EYHAETIKLVREAVETFTP---YYRPVALALDTKGPEIRTGLINGSATAEISLIKGNKIK 355
           EYH  TIK VREA E+F      YRPVA+ALDTKGPEIRTGLI GS TAE+ L KG  +K
Sbjct: 81  EYHEGTIKNVREATESFASDPITYRPVAIALDTKGPEIRTGLIKGSGTAEVELKKGAALK 140

Query: 356 MVIDEKYAEACNEEILWVDYKNIVKILNPGCRIYVDDGLISLIVQEKGPDFLDCEVENGG 535
           + +D  + E C+E +LWVDYKN++K+++ G +IYVDDGLISL+V+EKG DF+  EVENGG
Sbjct: 141 VTLDNAFMENCDENVLWVDYKNLIKVIDVGSKIYVDDGLISLLVKEKGKDFVMTEVENGG 200

Query: 536 KLGSKKGVNLPGAKVDLPAVSDKDISDLHFGVEQGVDMVFASFIRCGAAVDEIRSILGEK 715
            LGSKKGVNLPGA VDLPAVS+KDI DL FGVEQ VDMVFASFIR  A V  +R +LGEK
Sbjct: 201 MLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQNVDMVFASFIRKAADVHAVRKVLGEK 260

Query: 716 GKHILIISKIENHE 757
           GKHI IISKIENHE
Sbjct: 261 GKHIKIISKIENHE 274
>sp|Q92122|KPYK_XENLA Pyruvate kinase, muscle isozyme (Cytosolic thyroid hormone binding
           protein) (CTHBP)
          Length = 527

 Score =  347 bits (890), Expect = 2e-95
 Identities = 173/254 (68%), Positives = 205/254 (80%), Gaps = 3/254 (1%)
 Frame = +2

Query: 5   IARSHLEYICNLDIDSEPDVVRSSSIICTIGPACRNVNTLKKMIASGMNIARMNFSHGSH 184
           +A + LE++C LDIDSEP V R++ IICTIGPA R+V  LK+MI SGMNIAR+NFSHG+H
Sbjct: 18  MADTFLEHMCRLDIDSEPIVARNTGIICTIGPASRSVEMLKEMIKSGMNIARLNFSHGTH 77

Query: 185 EYHAETIKLVREAVETFTP---YYRPVALALDTKGPEIRTGLINGSATAEISLIKGNKIK 355
           EYHA TIK VREA E+      +YRPVA+ALDTKGPEIRTGLI GS TAE+ L KG  ++
Sbjct: 78  EYHAGTIKNVREATESLASNPIHYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATMR 137

Query: 356 MVIDEKYAEACNEEILWVDYKNIVKILNPGCRIYVDDGLISLIVQEKGPDFLDCEVENGG 535
           + +D+ + E C+E +LWVDYKN+ K++ PG +IYVDDGLISL+V+E GPDF   E+ENGG
Sbjct: 138 ITLDDAFQENCDENVLWVDYKNLTKVVKPGSKIYVDDGLISLLVKEIGPDFCVTEIENGG 197

Query: 536 KLGSKKGVNLPGAKVDLPAVSDKDISDLHFGVEQGVDMVFASFIRCGAAVDEIRSILGEK 715
            LGSKKGVNLPGA VDLPAVS KDI DL FGVEQ VDMVFASFIR  A V E+R +LGEK
Sbjct: 198 MLGSKKGVNLPGAAVDLPAVSSKDIQDLQFGVEQDVDMVFASFIRKAADVHEVREVLGEK 257

Query: 716 GKHILIISKIENHE 757
           GK+I IISKIENHE
Sbjct: 258 GKNIKIISKIENHE 271
>sp|P52480|KPYM_MOUSE Pyruvate kinase, isozyme M2
          Length = 531

 Score =  347 bits (889), Expect = 3e-95
 Identities = 176/254 (69%), Positives = 203/254 (79%), Gaps = 3/254 (1%)
 Frame = +2

Query: 5   IARSHLEYICNLDIDSEPDVVRSSSIICTIGPACRNVNTLKKMIASGMNIARMNFSHGSH 184
           +A + LE++C LDIDS P   R++ IICTIGPA R+V  LK+MI SGMN+AR+NFSHG+H
Sbjct: 22  MADTFLEHMCRLDIDSAPITARNTGIICTIGPASRSVEMLKEMIKSGMNVARLNFSHGTH 81

Query: 185 EYHAETIKLVREAVETFTP---YYRPVALALDTKGPEIRTGLINGSATAEISLIKGNKIK 355
           EYHAETIK VREA E+F      YRPVA+ALDTKGPEIRTGLI GS TAE+ L KG  +K
Sbjct: 82  EYHAETIKNVREATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLK 141

Query: 356 MVIDEKYAEACNEEILWVDYKNIVKILNPGCRIYVDDGLISLIVQEKGPDFLDCEVENGG 535
           + +D  Y E C+E ILW+DYKNI K++  G +IYVDDGLISL V+EKG DFL  EVENGG
Sbjct: 142 ITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKEKGADFLVTEVENGG 201

Query: 536 KLGSKKGVNLPGAKVDLPAVSDKDISDLHFGVEQGVDMVFASFIRCGAAVDEIRSILGEK 715
            LGSKKGVNLPGA VDLPAVS+KDI DL FGVEQ VDMVFASFIR  A V E+R +LGEK
Sbjct: 202 SLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKAADVHEVRKVLGEK 261

Query: 716 GKHILIISKIENHE 757
           GK+I IISKIENHE
Sbjct: 262 GKNIKIISKIENHE 275
>sp|P14618|KPYM_HUMAN Pyruvate kinase, isozymes M1/M2 (Pyruvate kinase muscle isozyme)
           (Cytosolic thyroid hormone-binding protein) (CTHBP)
           (THBP1)
          Length = 531

 Score =  344 bits (883), Expect = 1e-94
 Identities = 174/254 (68%), Positives = 203/254 (79%), Gaps = 3/254 (1%)
 Frame = +2

Query: 5   IARSHLEYICNLDIDSEPDVVRSSSIICTIGPACRNVNTLKKMIASGMNIARMNFSHGSH 184
           +A + LE++C LDIDS P   R++ IICTIGPA R+V TLK+MI SGMN+AR+NFSHG+H
Sbjct: 22  MADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTH 81

Query: 185 EYHAETIKLVREAVETFTP---YYRPVALALDTKGPEIRTGLINGSATAEISLIKGNKIK 355
           EYHAETIK VR A E+F      YRPVA+ALDTKGPEIRTGLI GS TAE+ L KG  +K
Sbjct: 82  EYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLK 141

Query: 356 MVIDEKYAEACNEEILWVDYKNIVKILNPGCRIYVDDGLISLIVQEKGPDFLDCEVENGG 535
           + +D  Y E C+E ILW+DYKNI K++  G +IYVDDGLISL V++KG DFL  EVENGG
Sbjct: 142 ITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENGG 201

Query: 536 KLGSKKGVNLPGAKVDLPAVSDKDISDLHFGVEQGVDMVFASFIRCGAAVDEIRSILGEK 715
            LGSKKGVNLPGA VDLPAVS+KDI DL FGVEQ VDMVFASFIR  + V E+R +LGEK
Sbjct: 202 SLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEK 261

Query: 716 GKHILIISKIENHE 757
           GK+I IISKIENHE
Sbjct: 262 GKNIKIISKIENHE 275
>sp|P11979|KPYM_FELCA Pyruvate kinase, isozyme M1 (Pyruvate kinase muscle isozyme)
          Length = 531

 Score =  344 bits (882), Expect = 2e-94
 Identities = 172/254 (67%), Positives = 203/254 (79%), Gaps = 3/254 (1%)
 Frame = +2

Query: 5   IARSHLEYICNLDIDSEPDVVRSSSIICTIGPACRNVNTLKKMIASGMNIARMNFSHGSH 184
           +A + LE++C LDIDS P   R++ IICTIGPA R+V  LK+MI SGMN+AR+NFSHG+H
Sbjct: 22  MADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVEILKEMIKSGMNVARLNFSHGTH 81

Query: 185 EYHAETIKLVREAVETFTP---YYRPVALALDTKGPEIRTGLINGSATAEISLIKGNKIK 355
           EYHAETIK VR A E+F      YRPVA+ALDTKGPEIRTGLI GS TAE+ L KG  +K
Sbjct: 82  EYHAETIKNVRAATESFASDPIRYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLK 141

Query: 356 MVIDEKYAEACNEEILWVDYKNIVKILNPGCRIYVDDGLISLIVQEKGPDFLDCEVENGG 535
           + +D  Y E C+E +LW+DYKNI K++  G ++YVDDGLISL+V+EKG DFL  EVENGG
Sbjct: 142 ITLDNAYMEKCDENVLWLDYKNICKVVEVGSKVYVDDGLISLLVKEKGADFLVTEVENGG 201

Query: 536 KLGSKKGVNLPGAKVDLPAVSDKDISDLHFGVEQGVDMVFASFIRCGAAVDEIRSILGEK 715
            LGSKKGVNLPGA VDLPAVS+KDI DL FGVEQ VDMVFASFIR  + V E+R +LGEK
Sbjct: 202 SLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEK 261

Query: 716 GKHILIISKIENHE 757
           GK+I IISKIENHE
Sbjct: 262 GKNIKIISKIENHE 275
>sp|P11980|KPYM_RAT Pyruvate kinase, isozymes M1/M2 (Pyruvate kinase muscle isozyme)
          Length = 531

 Score =  343 bits (880), Expect = 3e-94
 Identities = 174/254 (68%), Positives = 202/254 (79%), Gaps = 3/254 (1%)
 Frame = +2

Query: 5   IARSHLEYICNLDIDSEPDVVRSSSIICTIGPACRNVNTLKKMIASGMNIARMNFSHGSH 184
           +A + LE++C LDIDS P   R++ IICTIGPA R+V  LK+MI SGMN+AR+NFSHG+H
Sbjct: 22  MADTFLEHMCRLDIDSAPITARNTGIICTIGPASRSVEMLKEMIKSGMNVARLNFSHGTH 81

Query: 185 EYHAETIKLVREAVETFTP---YYRPVALALDTKGPEIRTGLINGSATAEISLIKGNKIK 355
           EYHAETIK VR A E+F      YRPVA+ALDTKGPEIRTGLI GS TAE+ L KG  +K
Sbjct: 82  EYHAETIKNVRAATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLK 141

Query: 356 MVIDEKYAEACNEEILWVDYKNIVKILNPGCRIYVDDGLISLIVQEKGPDFLDCEVENGG 535
           + +D  Y E C+E ILW+DYKNI K++  G +IYVDDGLISL V+EKG D+L  EVENGG
Sbjct: 142 ITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKEKGADYLVTEVENGG 201

Query: 536 KLGSKKGVNLPGAKVDLPAVSDKDISDLHFGVEQGVDMVFASFIRCGAAVDEIRSILGEK 715
            LGSKKGVNLPGA VDLPAVS+KDI DL FGVEQ VDMVFASFIR  A V E+R +LGEK
Sbjct: 202 SLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKAADVHEVRKVLGEK 261

Query: 716 GKHILIISKIENHE 757
           GK+I IISKIENHE
Sbjct: 262 GKNIKIISKIENHE 275
>sp|O62619|KPYK_DROME Pyruvate kinase (PK)
          Length = 533

 Score =  317 bits (811), Expect = 3e-86
 Identities = 163/253 (64%), Positives = 198/253 (78%), Gaps = 3/253 (1%)
 Frame = +2

Query: 8   ARSHLEYICNLDIDSEPDVVRSSSIICTIGPACRNVNTLKKMIASGMNIARMNFSHGSHE 187
           A + LE++C L  DS    VR S I+CTIGPA  +V  L+KM+A+GMNIARMNFSHGSHE
Sbjct: 26  ADTQLEHMCRLQFDSPVPHVRLSGIVCTIGPASSSVEMLEKMMATGMNIARMNFSHGSHE 85

Query: 188 YHAETIKLVREAVETFTP---YYRPVALALDTKGPEIRTGLINGSATAEISLIKGNKIKM 358
           YHA T+  VR+AV+ ++    Y  PVA+ALDTKGPEIRTGLI GS TAEI L KG KIK+
Sbjct: 86  YHAATVANVRQAVKNYSAKLGYEHPVAIALDTKGPEIRTGLIGGSGTAEIELKKGEKIKL 145

Query: 359 VIDEKYAEACNEEILWVDYKNIVKILNPGCRIYVDDGLISLIVQEKGPDFLDCEVENGGK 538
             ++++ E  + EI++VDY+NIV ++ PG R++VDDGLISLIV+E G D L CEVENGG 
Sbjct: 146 TTNKEFLEKGSLEIVYVDYENIVNVVKPGNRVFVDDGLISLIVREVGKDSLTCEVENGGS 205

Query: 539 LGSKKGVNLPGAKVDLPAVSDKDISDLHFGVEQGVDMVFASFIRCGAAVDEIRSILGEKG 718
           LGS+KGVNLPG  VDLPAVS+KD SDL FGVEQ VDM+FASFIR  AA+ EIR +LGEKG
Sbjct: 206 LGSRKGVNLPGVPVDLPAVSEKDKSDLLFGVEQEVDMIFASFIRNAAALTEIRKVLGEKG 265

Query: 719 KHILIISKIENHE 757
           K+I IISKIEN +
Sbjct: 266 KNIKIISKIENQQ 278
>sp|P30613|KPYR_HUMAN Pyruvate kinase, isozymes R/L (R-type/L-type pyruvate kinase) (Red
           cell/liver pyruvate kinase)
          Length = 574

 Score =  304 bits (778), Expect = 2e-82
 Identities = 152/254 (59%), Positives = 196/254 (77%), Gaps = 3/254 (1%)
 Frame = +2

Query: 5   IARSHLEYICNLDIDSEPDVVRSSSIICTIGPACRNVNTLKKMIASGMNIARMNFSHGSH 184
           +A + LE++C LDIDSEP   RS+SII TIGPA R+V  LK+MI +GMNIAR+NFSHGSH
Sbjct: 65  MADTFLEHLCLLDIDSEPVAARSTSIIATIGPASRSVERLKEMIKAGMNIARLNFSHGSH 124

Query: 185 EYHAETIKLVREAVETFTPY---YRPVALALDTKGPEIRTGLINGSATAEISLIKGNKIK 355
           EYHAE+I  VREAVE+F      YRPVA+ALDTKGPEIRTG++ G   +E+ L+KG+++ 
Sbjct: 125 EYHAESIANVREAVESFAGSPLSYRPVAIALDTKGPEIRTGILQGGPESEVELVKGSQVL 184

Query: 356 MVIDEKYAEACNEEILWVDYKNIVKILNPGCRIYVDDGLISLIVQEKGPDFLDCEVENGG 535
           + +D  +    N   +WVDY NIV+++  G RIY+DDGLISL+VQ+ GP+ L  +VENGG
Sbjct: 185 VTVDPAFRTRGNANTVWVDYPNIVRVVPVGGRIYIDDGLISLVVQKIGPEGLVTQVENGG 244

Query: 536 KLGSKKGVNLPGAKVDLPAVSDKDISDLHFGVEQGVDMVFASFIRCGAAVDEIRSILGEK 715
            LGS+KGVNLPGA+VDLP +S++D+ DL FGVE GVD+VFASF+R  + V  +R+ LG +
Sbjct: 245 VLGSRKGVNLPGAQVDLPGLSEQDVRDLRFGVEHGVDIVFASFVRKASDVAAVRAALGPE 304

Query: 716 GKHILIISKIENHE 757
           G  I IISKIENHE
Sbjct: 305 GHGIKIISKIENHE 318
>sp|P12928|KPYR_RAT Pyruvate kinase, isozymes R/L (L-PK)
          Length = 574

 Score =  291 bits (744), Expect = 2e-78
 Identities = 142/254 (55%), Positives = 195/254 (76%), Gaps = 3/254 (1%)
 Frame = +2

Query: 5   IARSHLEYICNLDIDSEPDVVRSSSIICTIGPACRNVNTLKKMIASGMNIARMNFSHGSH 184
           +A + LE++C LDIDS+P   RS+SII TIGPA R+V+ LK+MI +GMNIAR+NFSHGSH
Sbjct: 65  MADTFLEHLCLLDIDSQPVAARSTSIIATIGPASRSVDRLKEMIKAGMNIARLNFSHGSH 124

Query: 185 EYHAETIKLVREAVETFTPY---YRPVALALDTKGPEIRTGLINGSATAEISLIKGNKIK 355
           EYHAE+I  +REA E+F      YRPVA+ALDTKGPEIRTG++ G   +E+ ++KG+++ 
Sbjct: 125 EYHAESIANIREATESFATSPLSYRPVAIALDTKGPEIRTGVLQGGPESEVEIVKGSQVL 184

Query: 356 MVIDEKYAEACNEEILWVDYKNIVKILNPGCRIYVDDGLISLIVQEKGPDFLDCEVENGG 535
           + +D K+    + + +WVDY NI +++  G RIY+DDGLISL+VQ+ GP+ L  EVE+GG
Sbjct: 185 VTVDPKFQTRGDAKTVWVDYHNITRVVAVGGRIYIDDGLISLVVQKIGPEGLVTEVEHGG 244

Query: 536 KLGSKKGVNLPGAKVDLPAVSDKDISDLHFGVEQGVDMVFASFIRCGAAVDEIRSILGEK 715
            LGS+KGVNLP  +VDLP +S++D+ DL FGV+  VD++FASF+R  + V  +R  LG +
Sbjct: 245 ILGSRKGVNLPNTEVDLPGLSEQDLLDLRFGVQHNVDIIFASFVRKASDVLAVRDALGPE 304

Query: 716 GKHILIISKIENHE 757
           G++I IISKIENHE
Sbjct: 305 GQNIKIISKIENHE 318
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,711,858
Number of Sequences: 369166
Number of extensions: 1623620
Number of successful extensions: 5325
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5154
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6970118400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)