Planaria EST Database


DrC_01311

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01311
         (766 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9WUB0|UB7I3_MOUSE  Ubiquitin-conjugating enzyme 7-intera...    69   1e-11
sp|Q62921|UB7I3_RAT  Ubiquitin-conjugating enzyme 7-interact...    68   2e-11
sp|Q9BYM8|UB7I3_HUMAN  Ubiquitin-conjugating enzyme 7-intera...    64   3e-10
sp|Q9UBS8|RNF14_HUMAN  RING finger protein 14 (Androgen rece...    60   8e-09
sp|Q9JI90|RNF14_MOUSE  RING finger protein 14 (Androgen rece...    60   8e-09
sp|O95376|ARI2_HUMAN  Ariadne-2 protein homolog (ARI-2) (Tri...    52   2e-06
sp|Q9Y4X5|ARI1_HUMAN  Ariadne-1 protein homolog (ARI-1) (Ubi...    51   4e-06
sp|Q9Z1K5|ARI1_MOUSE  Ariadne-1 protein homolog (ARI-1) (Ubi...    51   4e-06
sp|P36113|YKZ7_YEAST  Hypothetical 63.6 kDa protein in YPT52...    51   4e-06
sp|Q9Z1K6|ARI2_MOUSE  Ariadne-2 protein homolog (ARI-2) (Tri...    50   5e-06
>sp|Q9WUB0|UB7I3_MOUSE Ubiquitin-conjugating enzyme 7-interacting protein 3
           (UbcM4-interacting protein 28)
          Length = 498

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 19/146 (13%)
 Frame = +1

Query: 43  EKCLLCNDEKDEC----------EKVKLK-CNHVFCWICFEKYLKINLSVTIKCPVV--- 180
           ++ L+ N E  EC          E V L+ C H FC  C +  ++ +    + CP +   
Sbjct: 258 QRSLVLNTEPTECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVACPFIDST 317

Query: 181 -SCQEIIHDDQIRKVLCWEDLEKYENLCLK----DFTKAHYCLLPQCRIPVFYQDPNVQF 345
            SC   + + +IR +L  ED +++ +L +       T +++C  P CR   F++D   +F
Sbjct: 318 YSCPGKLLEREIRALLSPEDYQRFLDLGVSIAENRSTLSYHCKTPDCRGWCFFEDDVNEF 377

Query: 346 ECANCSLYNCIKCQAAHGFIGCKAYQ 423
            C  C+  NC+ C+A H  + C+ YQ
Sbjct: 378 TCPVCTRVNCLLCKAIHEHMNCREYQ 403
>sp|Q62921|UB7I3_RAT Ubiquitin-conjugating enzyme 7-interacting protein 3 (RBCC protein
           interacting with PKC) (Protein kinase C-binding protein
           beta-15)
          Length = 498

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 19/146 (13%)
 Frame = +1

Query: 43  EKCLLCNDEKDEC----------EKVKLK-CNHVFCWICFEKYLKINLSVTIKCPVV--- 180
           ++ L+ N E  EC          E V L+ C H FC  C +  ++ +    + CP +   
Sbjct: 258 QRSLVLNTEPAECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCPFIDNT 317

Query: 181 -SCQEIIHDDQIRKVLCWEDLEKYENLCLK----DFTKAHYCLLPQCRIPVFYQDPNVQF 345
            SC   + + +IR +L  ED +++ +L +       T +++C  P CR   F++D   +F
Sbjct: 318 YSCPGKLLEREIRALLSPEDYQRFLDLGVSIAENRSTLSYHCKTPDCRGWCFFEDDVNEF 377

Query: 346 ECANCSLYNCIKCQAAHGFIGCKAYQ 423
            C  C+  NC+ C+A H  + C+ YQ
Sbjct: 378 TCPVCTRVNCLLCKAIHERMNCREYQ 403
>sp|Q9BYM8|UB7I3_HUMAN Ubiquitin-conjugating enzyme 7-interacting protein 3 (Hepatitis B
           virus X-associated protein 4) (HBV-associated factor 4)
           (RING finger protein 54)
          Length = 500

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 19/146 (13%)
 Frame = +1

Query: 43  EKCLLCNDEKDEC----------EKVKLK-CNHVFCWICFEKYLKINLSVTIKCPVV--- 180
           ++ L+ N E  EC          E V L+ C H FC  C +  ++ +    + CP +   
Sbjct: 260 QRSLVLNTEPAECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCPFIDNT 319

Query: 181 -SCQEIIHDDQIRKVLCWEDLEKYENLCLKDFTK----AHYCLLPQCRIPVFYQDPNVQF 345
            SC   + + +I+ +L  ED +++ +L +         +++C  P C+   F++D   +F
Sbjct: 320 YSCSGKLLEREIKALLTPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEF 379

Query: 346 ECANCSLYNCIKCQAAHGFIGCKAYQ 423
            C  C   NC+ C+A H  + CK YQ
Sbjct: 380 TCPVCFHVNCLLCKAIHEQMNCKEYQ 405
>sp|Q9UBS8|RNF14_HUMAN RING finger protein 14 (Androgen receptor-associated protein 54)
           (Triad2 protein) (HFB30)
          Length = 474

 Score = 59.7 bits (143), Expect = 8e-09
 Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 11/151 (7%)
 Frame = +1

Query: 10  FSNQFFL*LNMEKCLLCNDEK--DECEKVKLKCNHVFCWICFEKYLKINLS----VTIKC 171
           F+++ FL      C +C  EK   EC    L+C HV+C  C + Y +I +       + C
Sbjct: 213 FNSKLFL------CSICFCEKLGSECMYF-LECRHVYCKACLKDYFEIQIRDGQVQCLNC 265

Query: 172 PVVSCQEIIHDDQIRKVLCWEDLEKYENLCLKD----FTKAHYCLLPQCRIPVFYQDPNV 339
           P   C  +    Q+++++  E   +Y+ L L+          YC  P C++PV  +    
Sbjct: 266 PEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCT 325

Query: 340 QFECANCSLYNCIKCQAA-HGFIGCKAYQSK 429
              C++C+   C  C+   HG   CK    K
Sbjct: 326 MGICSSCNFAFCTLCRLTYHGVSPCKVTAEK 356
>sp|Q9JI90|RNF14_MOUSE RING finger protein 14 (Androgen receptor-associated protein 54)
           (Triad2 protein)
          Length = 485

 Score = 59.7 bits (143), Expect = 8e-09
 Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 11/151 (7%)
 Frame = +1

Query: 10  FSNQFFL*LNMEKCLLCNDEK--DECEKVKLKCNHVFCWICFEKYLKINLS----VTIKC 171
           F+++ FL      C +C  EK   +C    L+C HV+C  C + Y +I +       + C
Sbjct: 214 FNSKLFL------CSICFCEKLGSDCMYF-LECKHVYCKACLKDYFEIQIKDGQVKCLNC 266

Query: 172 PVVSCQEIIHDDQIRKVLCWEDLEKYENLCLKD----FTKAHYCLLPQCRIPVFYQDPNV 339
           P   C  +    Q+++++  +   +Y+ L L+          YC  P C++PV  +    
Sbjct: 267 PEPQCPSVATPGQVKELVEADLFARYDRLLLQSTLDLMADVVYCPRPCCQLPVMQEPGGT 326

Query: 340 QFECANCSLYNCIKCQAA-HGFIGCKAYQSK 429
              C++C+   C  C+   HG   CK    K
Sbjct: 327 MAICSSCNFAFCTLCRLTYHGLSPCKVTAEK 357
>sp|O95376|ARI2_HUMAN Ariadne-2 protein homolog (ARI-2) (Triad1 protein)
          Length = 493

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
 Frame = +1

Query: 49  CLLCNDEKDECEKVKLKCNHVFCWICFEKY----LKINLSVTIKCPVVSCQEIIHDDQIR 216
           C +C     +   + L C H FC  C+E++    +K  + V + C    C     +D + 
Sbjct: 139 CAVCMQFVRKENLLSLACQHQFCRSCWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFVF 198

Query: 217 KVLCWEDL-EKYENLCLKDFTKAHY----CLLPQCRIPVFYQDPNV-QFECANCSLYNCI 378
            +L  E+L EKY     +D+ ++HY    C    C + +  Q+P   + +C  C+   C 
Sbjct: 199 PLLPNEELREKYRRYLFRDYVESHYQLQLCPGADCPMVIRVQEPRARRVQCNRCNEVFCF 258

Query: 379 KCQ 387
           KC+
Sbjct: 259 KCR 261

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +1

Query: 46  KCLLCNDEKDECEKVKL-KCNHVFCWIC 126
           KC +C ++   C  ++  KC H FCW+C
Sbjct: 299 KCNICIEKNGGCNHMQCSKCKHDFCWMC 326
>sp|Q9Y4X5|ARI1_HUMAN Ariadne-1 protein homolog (ARI-1) (Ubiquitin-conjugating enzyme
           E2-binding protein 1) (UbcH7-binding protein)
           (UbcM4-interacting protein) (HHARI) (H7-AP2) (MOP-6)
          Length = 557

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 11/154 (7%)
 Frame = +1

Query: 49  CLLCNDEKDECEKVKLKCNHVFCWICFEKYL-----KINLSVTIKCPVVSCQEIIHDDQI 213
           C +C           L+C H FC  C+ +YL     +  +  TI CP   C  ++ D+ +
Sbjct: 186 CQICYLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTV 245

Query: 214 RKVLCWEDLE-KYENLCLKDFTKAH----YCLLPQCRIPVFYQDPNVQFECANCSLYNCI 378
            +++    ++ KY++L    F + +    +C  P C   V  Q P+ +     C    C 
Sbjct: 246 MRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCF 305

Query: 379 KC-QAAHGFIGCKAYQSKPSKNKVKVCEGRDDIS 477
            C +  H  + CK       K  +K C+   + S
Sbjct: 306 NCGENWHDPVKCKWL-----KKWIKKCDDDSETS 334
>sp|Q9Z1K5|ARI1_MOUSE Ariadne-1 protein homolog (ARI-1) (Ubiquitin-conjugating enzyme
           E2-binding protein 1) (UbcH7-binding protein)
           (UbcM4-interacting protein 77)
          Length = 555

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 11/154 (7%)
 Frame = +1

Query: 49  CLLCNDEKDECEKVKLKCNHVFCWICFEKYL-----KINLSVTIKCPVVSCQEIIHDDQI 213
           C +C           L+C H FC  C+ +YL     +  +  TI CP   C  ++ D+ +
Sbjct: 184 CQICYLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTV 243

Query: 214 RKVLCWEDLE-KYENLCLKDFTKAH----YCLLPQCRIPVFYQDPNVQFECANCSLYNCI 378
            +++    ++ KY++L    F + +    +C  P C   V  Q P+ +     C    C 
Sbjct: 244 MRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCF 303

Query: 379 KC-QAAHGFIGCKAYQSKPSKNKVKVCEGRDDIS 477
            C +  H  + CK       K  +K C+   + S
Sbjct: 304 NCGENWHDPVKCKWL-----KKWIKKCDDDSETS 332
>sp|P36113|YKZ7_YEAST Hypothetical 63.6 kDa protein in YPT52-GCN3 intergenic region
          Length = 551

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
 Frame = +1

Query: 49  CLLCNDEKDECEKVKLKCNHVFCWICFEKYLKINLSVTIKCPVVSCQEIIHDDQIRKVLC 228
           C++C D+KD  E   L+C H +C  C+  Y+K  L        + C   + ++ I KV+ 
Sbjct: 179 CIICCDKKDT-ETFALECGHEYCINCYRHYIKDKLHEGNIITCMDCSLALKNEDIDKVMG 237

Query: 229 WEDLEKYENLCLKDFTKAH-----YCLLPQCRIPVFYQDPNVQFECANCSLYNCIKCQAA 393
                K  +  +K F + H     +C    C+  V  +D +   E         +KC + 
Sbjct: 238 HPSSSKLMDSSIKSFVQKHNRNYKWCPFADCKSIVHLRDTSSLPEYTRLHYSPFVKCNSF 297

Query: 394 HGF 402
           H F
Sbjct: 298 HRF 300
>sp|Q9Z1K6|ARI2_MOUSE Ariadne-2 protein homolog (ARI-2) (Triad1 protein)
           (UbcM4-interacting protein 48)
          Length = 492

 Score = 50.4 bits (119), Expect = 5e-06
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
 Frame = +1

Query: 49  CLLCNDEKDECEKVKLKCNHVFCWICFEKY----LKINLSVTIKCPVVSCQEIIHDDQIR 216
           C +C     +   + L C H FC  C+E++    +K  + V I C    C     +D + 
Sbjct: 138 CAVCMQFVRKENLLSLACQHQFCRSCWEQHCSVLVKDGVGVGISCMAQDCPLRTPEDFVF 197

Query: 217 KVLCWEDL-EKYENLCLKDFTKAHY----CLLPQCRIPVFYQDPNV-QFECANCSLYNCI 378
            +L  E+L +KY     +D+ ++H+    C    C + +  Q+P   + +C  CS   C 
Sbjct: 198 PLLPNEELRDKYRRYLFRDYVESHFQLQLCPGADCPMVIRVQEPRARRVQCNRCSEVFCF 257

Query: 379 KCQ 387
           KC+
Sbjct: 258 KCR 260

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +1

Query: 46  KCLLCNDEKDECEKVKL-KCNHVFCWIC 126
           KC +C ++   C  ++  KC H FCW+C
Sbjct: 298 KCNICIEKNGGCNHMQCSKCKHDFCWMC 325
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,633,163
Number of Sequences: 369166
Number of extensions: 1617193
Number of successful extensions: 4384
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4359
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7066925600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)