Planaria EST Database


DrC_01297

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01297
         (837 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q95PU1|TPM_ECHMU  Tropomyosin                                  260   4e-69
sp|Q26519|TPM_SCHJA  Tropomyosin                                  258   1e-68
sp|P42637|TPM1_SCHMA  Tropomyosin 1 (TMI) (Polypeptide 49)        256   5e-68
sp|Q26503|TPM_SCHHA  Tropomyosin                                  256   7e-68
sp|Q23758|TPM_CLOSI  Tropomyosin                                  241   1e-63
sp|P43689|TPM2_BIOGL  Tropomyosin 2 (TMII)                        231   1e-60
sp|O97192|TPM_HELAS  Tropomyosin (Allergen Hel as 1)              231   1e-60
sp|P42638|TPM2_SCHMA  Tropomyosin 2 (TMII)                        229   7e-60
sp|Q9GZ71|TPM_HALDV  Tropomyosin                                  226   8e-59
sp|Q25145|TPM_HALRU  Tropomyosin                                  219   6e-57
>sp|Q95PU1|TPM_ECHMU Tropomyosin
          Length = 284

 Score =  260 bits (664), Expect = 4e-69
 Identities = 143/274 (52%), Positives = 186/274 (67%)
 Frame = +3

Query: 3   AMKLEKENADEKSVXXXXXXXXXXXXXXXXXXXXNELLKELQIKQQECDKVQLALSEVNT 182
           AMKLEKENA EK++                    N+ L +++  Q E D VQ +L E  +
Sbjct: 10  AMKLEKENALEKAINLENQLKEKAKDFEKKEEEMNDWLSKVKNIQTEVDTVQESLQEAIS 69

Query: 183 KCEETEKRATDAEAEVAALSRRMVLLQADIEQTENRFIEASEKLEVASKLAEVNEKERKE 362
           K EETEKRAT+AEAEVAA++RR+ LL+ D EQ+  R  E S KL+ ASK AE +E+ RK 
Sbjct: 70  KLEETEKRATNAEAEVAAMTRRIRLLEEDFEQSSGRLTETSTKLDDASKAAEESERNRKT 129

Query: 363 YEVKSTLEDEKLNHLEQQVKEAKYIAEDADRKYEEAARKLAISVVDLERTETRXXXXXXX 542
            E +S  +DE++  LE+QVKEAKYIAEDA+RKY+EAAR+LA++ VDLER E+R       
Sbjct: 130 LETRSISDDERMAQLEEQVKEAKYIAEDAERKYDEAARRLAVTEVDLERAESRLETSESK 189

Query: 543 XXXXXXXXXIMGKNMKSLEISEQEAMRREESYEDTIRDITERLKXXXXXXXXXXXXVAKL 722
                    I+G NMKSLE+SEQE+++REESYE+TIRD+TERLK            V+KL
Sbjct: 190 IVELEEELRIVGNNMKSLEVSEQESLQREESYEETIRDLTERLKTAEQRAAEAERQVSKL 249

Query: 723 ESEVDRLEDDLLSEMEKYKGLSGELDFAFAELTN 824
           ++EVDRLED+LLSE E+Y+ +SGELD  FAELT+
Sbjct: 250 QNEVDRLEDELLSEKERYRAISGELDTTFAELTS 283
>sp|Q26519|TPM_SCHJA Tropomyosin
          Length = 284

 Score =  258 bits (660), Expect = 1e-68
 Identities = 144/273 (52%), Positives = 182/273 (66%)
 Frame = +3

Query: 3   AMKLEKENADEKSVXXXXXXXXXXXXXXXXXXXXNELLKELQIKQQECDKVQLALSEVNT 182
           AMKLEKENA E++V                    +EL  +++  Q +CD+VQ  L E   
Sbjct: 10  AMKLEKENAMERAVQYEELLKKKEEEREKRENEISELNTKMKQAQIDCDEVQETLQEQMN 69

Query: 183 KCEETEKRATDAEAEVAALSRRMVLLQADIEQTENRFIEASEKLEVASKLAEVNEKERKE 362
           K EETEKRAT+AEA+VAA++RR+ LL+ D+E + +R  E   KLE ASK AE +E+ RK+
Sbjct: 70  KLEETEKRATNAEAQVAAMTRRIRLLEEDLEVSSSRLTETLTKLEEASKTAEESERGRKD 129

Query: 363 YEVKSTLEDEKLNHLEQQVKEAKYIAEDADRKYEEAARKLAISVVDLERTETRXXXXXXX 542
            E++S  +DE+LN LE Q KEAKYIAEDADRKY+EAARKLAI+ VD ER E R       
Sbjct: 130 LEIRSIADDERLNQLEDQQKEAKYIAEDADRKYDEAARKLAIAEVDFERAEARLEAAESK 189

Query: 543 XXXXXXXXXIMGKNMKSLEISEQEAMRREESYEDTIRDITERLKXXXXXXXXXXXXVAKL 722
                    ++G NMK+LEISEQE+ +REESYE+TIRD+TERLK            V+KL
Sbjct: 190 IVELEEELRVVGNNMKALEISEQESAQREESYEETIRDLTERLKAAEQRATEAERQVSKL 249

Query: 723 ESEVDRLEDDLLSEMEKYKGLSGELDFAFAELT 821
           ++EVD LEDDLL+E E+YK LSGELD  FAELT
Sbjct: 250 QNEVDHLEDDLLAEKERYKALSGELDQTFAELT 282
>sp|P42637|TPM1_SCHMA Tropomyosin 1 (TMI) (Polypeptide 49)
          Length = 284

 Score =  256 bits (654), Expect = 5e-68
 Identities = 143/273 (52%), Positives = 180/273 (65%)
 Frame = +3

Query: 3   AMKLEKENADEKSVXXXXXXXXXXXXXXXXXXXXNELLKELQIKQQECDKVQLALSEVNT 182
           AMKLEKENA E++V                     EL  +++  Q +CD+ Q  L E   
Sbjct: 10  AMKLEKENAMERAVQYEELLKKKEEEREKRESEIAELNNKMKQAQIDCDEAQETLQEQMN 69

Query: 183 KCEETEKRATDAEAEVAALSRRMVLLQADIEQTENRFIEASEKLEVASKLAEVNEKERKE 362
           K EET+KRAT+AEAEVAA++RR+ LL+ D+E + +R  E   KLE ASK AE +E+ RK+
Sbjct: 70  KLEETDKRATNAEAEVAAMTRRIRLLEEDLEVSSSRLTETLTKLEEASKTAEESERGRKD 129

Query: 363 YEVKSTLEDEKLNHLEQQVKEAKYIAEDADRKYEEAARKLAISVVDLERTETRXXXXXXX 542
            E++S  +DE+LN LE Q KEAKYIAEDADRKY+EAARKLAI+ VD ER E R       
Sbjct: 130 LEIRSIADDERLNQLEDQQKEAKYIAEDADRKYDEAARKLAIAEVDFERAEARLEAAESK 189

Query: 543 XXXXXXXXXIMGKNMKSLEISEQEAMRREESYEDTIRDITERLKXXXXXXXXXXXXVAKL 722
                    ++G NMK+LEISEQE+ +REESYE+TIRD+TERLK            V+KL
Sbjct: 190 IVELEEELRVVGNNMKALEISEQESAQREESYEETIRDLTERLKAAEQRATEAERQVSKL 249

Query: 723 ESEVDRLEDDLLSEMEKYKGLSGELDFAFAELT 821
           ++EVD LEDDLL+E E+YK LSGELD  FAELT
Sbjct: 250 QNEVDHLEDDLLAEKERYKALSGELDQTFAELT 282
>sp|Q26503|TPM_SCHHA Tropomyosin
          Length = 284

 Score =  256 bits (653), Expect = 7e-68
 Identities = 143/273 (52%), Positives = 181/273 (66%)
 Frame = +3

Query: 3   AMKLEKENADEKSVXXXXXXXXXXXXXXXXXXXXNELLKELQIKQQECDKVQLALSEVNT 182
           AMKLEKENA E++V                     EL  +++  Q +CD+VQ  L E   
Sbjct: 10  AMKLEKENAMERAVQYEELLKKKEEEREKRESEIAELNTKMKQAQIDCDEVQETLQEQMN 69

Query: 183 KCEETEKRATDAEAEVAALSRRMVLLQADIEQTENRFIEASEKLEVASKLAEVNEKERKE 362
           K EET+KRAT+AEAEVAA++RR+ LL+ D+E + +R  E   KLE ASK AE +E+ RK+
Sbjct: 70  KLEETDKRATNAEAEVAAMTRRIRLLEEDLEVSSSRLTETLTKLEEASKTAEESERGRKD 129

Query: 363 YEVKSTLEDEKLNHLEQQVKEAKYIAEDADRKYEEAARKLAISVVDLERTETRXXXXXXX 542
            E++S  +DE+LN LE Q KEAKYIAEDADRKY+EAARKLAI+ VD +R E R       
Sbjct: 130 LEIRSIADDERLNQLEDQQKEAKYIAEDADRKYDEAARKLAIAEVDFKRAEARLEAAESK 189

Query: 543 XXXXXXXXXIMGKNMKSLEISEQEAMRREESYEDTIRDITERLKXXXXXXXXXXXXVAKL 722
                    ++G NMK+LEISEQE+ +REESYE+TIRD+TERLK            V+KL
Sbjct: 190 IVELEEELRVIGNNMKALEISEQESAQREESYEETIRDLTERLKAAEQRATEAERQVSKL 249

Query: 723 ESEVDRLEDDLLSEMEKYKGLSGELDFAFAELT 821
           ++EVD LEDDLL+E E+YK LSGELD  FAELT
Sbjct: 250 QNEVDHLEDDLLAEKERYKALSGELDQTFAELT 282
>sp|Q23758|TPM_CLOSI Tropomyosin
          Length = 284

 Score =  241 bits (616), Expect = 1e-63
 Identities = 138/273 (50%), Positives = 174/273 (63%)
 Frame = +3

Query: 3   AMKLEKENADEKSVXXXXXXXXXXXXXXXXXXXXNELLKELQIKQQECDKVQLALSEVNT 182
           AMKLEKENA E++V                     EL   ++  Q E D++Q AL +   
Sbjct: 10  AMKLEKENAMERAVQYEAQLKQKEEEQEKKETEIGELNNRMKQAQTELDEIQEALQDSLN 69

Query: 183 KCEETEKRATDAEAEVAALSRRMVLLQADIEQTENRFIEASEKLEVASKLAEVNEKERKE 362
           K EET+KRAT+AEAEVA ++RR+ LL+ D+E + +R  E   K + ASK AE +E+ RKE
Sbjct: 70  KMEETDKRATNAEAEVARMTRRIRLLEEDLEVSSSRLTETLAKFDEASKTAEESERGRKE 129

Query: 363 YEVKSTLEDEKLNHLEQQVKEAKYIAEDADRKYEEAARKLAISVVDLERTETRXXXXXXX 542
            E++S  +DE L+ LE Q KE KYIAEDADRKY+EAARKLAI  VD ER E+R       
Sbjct: 130 LEIRSIADDEGLSQLEDQQKEGKYIAEDADRKYDEAARKLAIVEVDFERAESRLEAAESK 189

Query: 543 XXXXXXXXXIMGKNMKSLEISEQEAMRREESYEDTIRDITERLKXXXXXXXXXXXXVAKL 722
                    ++G NMK+LEISEQE+ +REESYE+TIRD+TERLK            V+KL
Sbjct: 190 IVELEEELRVVGNNMKALEISEQESAQREESYEETIRDLTERLKAAEQRAAEAERQVSKL 249

Query: 723 ESEVDRLEDDLLSEMEKYKGLSGELDFAFAELT 821
           ++EVD LEDDLLSE  +YK LSG LD  FAELT
Sbjct: 250 QNEVDHLEDDLLSEKIRYKDLSGGLDQTFAELT 282
>sp|P43689|TPM2_BIOGL Tropomyosin 2 (TMII)
          Length = 284

 Score =  231 bits (590), Expect = 1e-60
 Identities = 129/272 (47%), Positives = 171/272 (62%)
 Frame = +3

Query: 3   AMKLEKENADEKSVXXXXXXXXXXXXXXXXXXXXNELLKELQIKQQECDKVQLALSEVNT 182
           AMK+EKENA +++                     N L K+    Q + D     L+E  T
Sbjct: 10  AMKMEKENAIDRAEQMEQKVRDVEETKNKLEEEFNNLQKKFSNLQNDFDTANEGLTEAQT 69

Query: 183 KCEETEKRATDAEAEVAALSRRMVLLQADIEQTENRFIEASEKLEVASKLAEVNEKERKE 362
           K E +EK   + E++ A L+RR+ LL+ D+E++E R   A+EKLE ASK A+ +E+ RK 
Sbjct: 70  KLEASEKHVAELESDTAGLNRRIQLLEEDLERSEERLQSATEKLEEASKAADESERGRKV 129

Query: 363 YEVKSTLEDEKLNHLEQQVKEAKYIAEDADRKYEEAARKLAISVVDLERTETRXXXXXXX 542
            E +S  +DE+L+ LE Q+KEAKYIAEDA+RKY+EAARKLAI+ VDLER E R       
Sbjct: 130 LESRSLADDERLDGLEAQLKEAKYIAEDAERKYDEAARKLAITEVDLERAEARLEAAEAK 189

Query: 543 XXXXXXXXXIMGKNMKSLEISEQEAMRREESYEDTIRDITERLKXXXXXXXXXXXXVAKL 722
                    ++G NMKSLEISEQEA +RE+SYE+TIRD+T+RLK            V+KL
Sbjct: 190 IIELEEELKVVGNNMKSLEISEQEASQREDSYEETIRDLTQRLKDAENRATEAERTVSKL 249

Query: 723 ESEVDRLEDDLLSEMEKYKGLSGELDFAFAEL 818
           + EVDRLED+LL+E E+YK +S ELD  FAEL
Sbjct: 250 QKEVDRLEDELLAEKERYKSISDELDSTFAEL 281
>sp|O97192|TPM_HELAS Tropomyosin (Allergen Hel as 1)
          Length = 284

 Score =  231 bits (590), Expect = 1e-60
 Identities = 129/272 (47%), Positives = 172/272 (63%)
 Frame = +3

Query: 3   AMKLEKENADEKSVXXXXXXXXXXXXXXXXXXXXNELLKELQIKQQECDKVQLALSEVNT 182
           AMK+EKENA +++                     N L K+  I + + D +   L + NT
Sbjct: 10  AMKMEKENALDRAEQVEQKLRDCECNKNKVEEDLNNLQKKFAILENDFDSINEQLLDANT 69

Query: 183 KCEETEKRATDAEAEVAALSRRMVLLQADIEQTENRFIEASEKLEVASKLAEVNEKERKE 362
           K E +EK+  + E+E A L RR+ LL+ D+E++E R   A+EKLE ASK A+ +E+ RK 
Sbjct: 70  KLEASEKKNAEIESETAGLQRRIQLLEEDLERSEERLQSATEKLEEASKAADESERGRKV 129

Query: 363 YEVKSTLEDEKLNHLEQQVKEAKYIAEDADRKYEEAARKLAISVVDLERTETRXXXXXXX 542
            E +S  +DE+L+ LE Q+KEAKYIAEDA+RK++EAARKLAI+ VDLER E R       
Sbjct: 130 LESRSLADDERLDGLEAQLKEAKYIAEDAERKFDEAARKLAITEVDLERAEARLEAAEAK 189

Query: 543 XXXXXXXXXIMGKNMKSLEISEQEAMRREESYEDTIRDITERLKXXXXXXXXXXXXVAKL 722
                    ++G NMKSLEISEQEA +RE+SYE+TIRD+T+RLK            V+KL
Sbjct: 190 ILELEEELKVVGNNMKSLEISEQEASQREDSYEETIRDLTQRLKDAENRASEAERTVSKL 249

Query: 723 ESEVDRLEDDLLSEMEKYKGLSGELDFAFAEL 818
           + EVDRLED+LL+E E+YK  S ELD  FAEL
Sbjct: 250 QKEVDRLEDELLAEKERYKATSDELDSTFAEL 281
>sp|P42638|TPM2_SCHMA Tropomyosin 2 (TMII)
          Length = 284

 Score =  229 bits (584), Expect = 7e-60
 Identities = 128/273 (46%), Positives = 178/273 (65%)
 Frame = +3

Query: 3   AMKLEKENADEKSVXXXXXXXXXXXXXXXXXXXXNELLKELQIKQQECDKVQLALSEVNT 182
           AMKL+KENA +++                      E+LK++Q    + +  Q  L+E NT
Sbjct: 10  AMKLDKENAVDEADQLEAKLREKELEMQTKDEEVAEVLKKIQQVDTDKETAQTQLAETNT 69

Query: 183 KCEETEKRATDAEAEVAALSRRMVLLQADIEQTENRFIEASEKLEVASKLAEVNEKERKE 362
           K EET+KRAT+AEAEVA+L +R+  L+ ++E TE R  EA+ KLE ASK A+ +++ RK 
Sbjct: 70  KLEETDKRATEAEAEVASLQKRIRQLEDELESTETRLQEATVKLEEASKAADESDRGRKV 129

Query: 363 YEVKSTLEDEKLNHLEQQVKEAKYIAEDADRKYEEAARKLAISVVDLERTETRXXXXXXX 542
            E ++  ++E++N LE+Q+KE+ ++AEDADRKY+EAARKLAI+ V+LER E+R       
Sbjct: 130 LENRTFADEERINQLEEQLKESTFMAEDADRKYDEAARKLAITEVELERAESRLEAAESK 189

Query: 543 XXXXXXXXXIMGKNMKSLEISEQEAMRREESYEDTIRDITERLKXXXXXXXXXXXXVAKL 722
                    I+G N+KSLEISEQEA +REE+YE+ IRD+TERLK            V  L
Sbjct: 190 ITELEEELRIVGNNVKSLEISEQEAAQREEAYEENIRDLTERLKAAEDRAQESERLVNTL 249

Query: 723 ESEVDRLEDDLLSEMEKYKGLSGELDFAFAELT 821
           +++ DRLED+L++E EKYK LS ELD  FAELT
Sbjct: 250 QADADRLEDELVTEKEKYKALSEELDSTFAELT 282
>sp|Q9GZ71|TPM_HALDV Tropomyosin
          Length = 284

 Score =  226 bits (575), Expect = 8e-59
 Identities = 126/272 (46%), Positives = 169/272 (62%)
 Frame = +3

Query: 3   AMKLEKENADEKSVXXXXXXXXXXXXXXXXXXXXNELLKELQIKQQECDKVQLALSEVNT 182
           AMK+EKENA +++                     N L K+    + + D V   L E   
Sbjct: 10  AMKMEKENAVDRAEQNEQKLRDTEEQKAKIEEDLNNLQKKCANLENDFDNVNEQLQEAMA 69

Query: 183 KCEETEKRATDAEAEVAALSRRMVLLQADIEQTENRFIEASEKLEVASKLAEVNEKERKE 362
           K E +EKR T+ E EV+  +R++ LL+ D+E+ E R   A+E+LE ASK A+ +E+  + 
Sbjct: 70  KLETSEKRVTEMEQEVSGTTRKITLLEEDLERNEERLQTATERLEEASKAADESERGARV 129

Query: 363 YEVKSTLEDEKLNHLEQQVKEAKYIAEDADRKYEEAARKLAISVVDLERTETRXXXXXXX 542
            E +S  +DE+++ LE Q+KEAKYIAEDA+RKY+EAARKLAI+ VDLER E R       
Sbjct: 130 LESRSLADDERIDQLEAQLKEAKYIAEDAERKYDEAARKLAITEVDLERAEARLEAAEAK 189

Query: 543 XXXXXXXXXIMGKNMKSLEISEQEAMRREESYEDTIRDITERLKXXXXXXXXXXXXVAKL 722
                    ++G NMKSLEISEQEA +RE+SYE+TIRD+T+RLK            V+KL
Sbjct: 190 ILELEEELKVVGNNMKSLEISEQEASQREDSYEETIRDLTQRLKDAENRATEAERTVSKL 249

Query: 723 ESEVDRLEDDLLSEMEKYKGLSGELDFAFAEL 818
           + EVDRLED+LL+E EKYK +S ELD  FAEL
Sbjct: 250 QKEVDRLEDELLAEKEKYKAISDELDQTFAEL 281
>sp|Q25145|TPM_HALRU Tropomyosin
          Length = 284

 Score =  219 bits (559), Expect = 6e-57
 Identities = 123/272 (45%), Positives = 167/272 (61%)
 Frame = +3

Query: 3   AMKLEKENADEKSVXXXXXXXXXXXXXXXXXXXXNELLKELQIKQQECDKVQLALSEVNT 182
           AMK+EKENA +++                     N L K+    + + D V   +     
Sbjct: 10  AMKMEKENAVDRAEQNEQKLRDTEEQKAKIEEDLNNLQKKCANLENDFDSVNEQVQVAMA 69

Query: 183 KCEETEKRATDAEAEVAALSRRMVLLQADIEQTENRFIEASEKLEVASKLAEVNEKERKE 362
           K E +EKR T+ E EV+  +R++ LL+ D+E+ E R   A+E+LE ASKL + +E+  + 
Sbjct: 70  KLETSEKRVTEMEQEVSGTTRKITLLEEDLERNEERLQTATERLEEASKLPDESERGARV 129

Query: 363 YEVKSTLEDEKLNHLEQQVKEAKYIAEDADRKYEEAARKLAISVVDLERTETRXXXXXXX 542
            E +S  +DE+++ LE Q+KEAKYIAEDA+RKY+EAARKLAI+ VDLER E R       
Sbjct: 130 LESRSLADDERIDQLEAQLKEAKYIAEDAERKYDEAARKLAITEVDLERAEARPKAAEAK 189

Query: 543 XXXXXXXXXIMGKNMKSLEISEQEAMRREESYEDTIRDITERLKXXXXXXXXXXXXVAKL 722
                    ++G N KSLEISEQEA +RE+SYE+TIRD+T+RLK            V+KL
Sbjct: 190 ILELEEELKVVGNNTKSLEISEQEASQREDSYEETIRDLTQRLKDAENRATEAERTVSKL 249

Query: 723 ESEVDRLEDDLLSEMEKYKGLSGELDFAFAEL 818
           + EVDRLED+LL+E EKYK +S ELD  FAEL
Sbjct: 250 QKEVDRLEDELLAEKEKYKAISDELDQTFAEL 281
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,757,567
Number of Sequences: 369166
Number of extensions: 913016
Number of successful extensions: 5845
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5496
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8148988185
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)