Planaria EST Database


DrC_01273

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01273
         (647 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P07797|FRI3_RANCA  Ferritin, lower subunit (Ferritin L)        117   2e-26
sp|Q26061|FRI_PACLE  Ferritin                                     117   3e-26
sp|P42577|FRIS_LYMST  Soma ferritin                               115   7e-26
sp|P49947|FRIM_SALSA  Ferritin, middle subunit (Ferritin M)       114   2e-25
sp|P17663|FRIH1_XENLA  Ferritin heavy chain 1                     113   4e-25
sp|P09528|FRIH_MOUSE  Ferritin heavy chain (Ferritin H subunit)   112   8e-25
sp|P19132|FRIH_RAT  Ferritin heavy chain (Ferritin H subunit)     112   1e-24
sp|P29389|FRIH_CRIGR  Ferritin heavy chain (Ferritin H subunit)   111   1e-24
sp|P07798|FRI2_RANCA  Ferritin, middle subunit (Ferritin M) ...   111   2e-24
sp|Q5R8J7|FRIH_PONPY  Ferritin heavy chain (Ferritin H subunit)   111   2e-24
>sp|P07797|FRI3_RANCA Ferritin, lower subunit (Ferritin L)
          Length = 173

 Score =  117 bits (294), Expect = 2e-26
 Identities = 64/172 (37%), Positives = 103/172 (59%), Gaps = 3/172 (1%)
 Frame = -1

Query: 599 VRGNVRQNLNITIEDGLNSQINTELKAFYIYESMAAFFQRPDVGLEGFEKFFRKSADEEL 420
           +   VRQN +   E GLN  +N +  + Y+Y SMA++F R DV L  F KFFR+ ++EE 
Sbjct: 1   MESQVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEK 60

Query: 419 KHARDMIEYINKRGGKYIPKPISLSSSDAKITWDGALDAVKDAMIKEKEVNAAIIELHKT 240
           +HA  +IEY N+RGG+   + +     D    W   L+A++ A+  +K VN A+++LH  
Sbjct: 61  EHAEKLIEYQNQRGGRVFLQSVEKPERD---DWANGLEALQTALKLQKSVNQALLDLHAV 117

Query: 239 AGDLSDPNVQNFLDD-YLMEQVNSIASLQVLISRFEKLKNTE--LAQFLIDQ 93
           A D SDP++ +FL+  YL E V +I  L   I+  +KL ++   +A++L ++
Sbjct: 118 AADKSDPHMTDFLESPYLSESVETIKKLGDHITSLKKLWSSHPGMAEYLFNK 169
>sp|Q26061|FRI_PACLE Ferritin
          Length = 181

 Score =  117 bits (292), Expect = 3e-26
 Identities = 64/170 (37%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
 Frame = -1

Query: 587 VRQNLNITIEDGLNSQINTELKAFYIYESMAAFFQRPDVGLEGFEKFFRKSADEELKHAR 408
           +R N +   E  +N QIN E  A Y+Y SM  +F R D+ L G  KFF+ S+DEE +H +
Sbjct: 5   IRHNYHEDCEP-INKQINLEFYASYVYMSMGHYFDRDDISLPGASKFFKDSSDEEREHGQ 63

Query: 407 DMIEYINKRGGKYIPKPISLSSSDAKITWDGALDAVKDAMIKEKEVNAAIIELHKTAGDL 228
            +++Y NKRG + + + I+  S      W    DA++ A+  E EVN ++++L  TA  +
Sbjct: 64  KLMKYQNKRGARIVLQAIAAPSLQ---EWGNLHDALQAALDLENEVNQSLLDLDATASKI 120

Query: 227 SDPNVQNFLD-DYLMEQVNSIASLQVLISRFEKLKNTELAQFLIDQELKK 81
           +DP++ N L+ ++L EQV SI  +  LI+R ++   + L +FL D+ELK+
Sbjct: 121 NDPHLTNMLEGEFLEEQVESIEKIGNLITRLKRAGTSGLGEFLFDKELKQ 170
>sp|P42577|FRIS_LYMST Soma ferritin
          Length = 174

 Score =  115 bits (289), Expect = 7e-26
 Identities = 64/166 (38%), Positives = 99/166 (59%), Gaps = 1/166 (0%)
 Frame = -1

Query: 584 RQNLNITIEDGLNSQINTELKAFYIYESMAAFFQRPDVGLEGFEKFFRKSADEELKHARD 405
           RQN +   E G+N QIN EL A Y Y+SMA +F R DV L GF KFF+  ++EE +HA  
Sbjct: 7   RQNYHAESEAGINRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEK 66

Query: 404 MIEYINKRGGKYIPKPISLSSSDAKITWDGALDAVKDAMIKEKEVNAAIIELHKTAGDLS 225
           +++Y NKRGG+ + + I     D    W   L+A++ A+  EK VN ++++LHK      
Sbjct: 67  LMKYQNKRGGRIVLQDIKKPDRD---EWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHD 123

Query: 224 DPNVQNFLD-DYLMEQVNSIASLQVLISRFEKLKNTELAQFLIDQE 90
           D  + +FL+ ++L EQV SI  L   I+  +++    L +++ D+E
Sbjct: 124 DAQMADFLESEFLEEQVKSIKELSDYITNLKRV-GPGLGEYIFDKE 168
>sp|P49947|FRIM_SALSA Ferritin, middle subunit (Ferritin M)
          Length = 176

 Score =  114 bits (285), Expect = 2e-25
 Identities = 64/172 (37%), Positives = 101/172 (58%), Gaps = 3/172 (1%)
 Frame = -1

Query: 599 VRGNVRQNLNITIEDGLNSQINTELKAFYIYESMAAFFQRPDVGLEGFEKFFRKSADEEL 420
           +   +RQN +   E  +N  IN E+ A Y Y SMA +F R DV L GF  FF+++++EE 
Sbjct: 1   MESQIRQNYHHDCERAINRMINMEMFASYTYTSMAFYFSRDDVALPGFAHFFKENSEEER 60

Query: 419 KHARDMIEYINKRGGKYIPKPISLSSSDAKITWDGALDAVKDAMIKEKEVNAAIIELHKT 240
           +HA  ++ + NKRGG+ + + I     D    W   L+A++ A+  EK VN A+++LHK 
Sbjct: 61  EHADKLLSFQNKRGGRILLQDIKKPERD---EWGNGLEAMQCALQLEKNVNQALLDLHKI 117

Query: 239 AGDLSDPNVQNFLD-DYLMEQVNSIASLQVLISRFEKLK--NTELAQFLIDQ 93
           A D  DP++ +FL+  YL EQV +I  L   I+   K+     ++A++L D+
Sbjct: 118 ASDKVDPHLCDFLETHYLNEQVEAIKKLGDHITNLTKMDAVKNKMAEYLFDK 169
>sp|P17663|FRIH1_XENLA Ferritin heavy chain 1
          Length = 176

 Score =  113 bits (283), Expect = 4e-25
 Identities = 62/172 (36%), Positives = 99/172 (57%), Gaps = 3/172 (1%)
 Frame = -1

Query: 599 VRGNVRQNLNITIEDGLNSQINTELKAFYIYESMAAFFQRPDVGLEGFEKFFRKSADEEL 420
           ++  VRQN N   E  +N  +N E+ A Y+Y SM+ +F R DV L    KFF++ + EE 
Sbjct: 1   MQSQVRQNFNSDCEAAINRMVNLEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEER 60

Query: 419 KHARDMIEYINKRGGKYIPKPISLSSSDAKITWDGALDAVKDAMIKEKEVNAAIIELHKT 240
           +HA   ++Y NKRGG+ + + I     D    W   L+A++ A+  EK VN A+++LHK 
Sbjct: 61  EHAEKFLKYQNKRGGRVVLQDIKKPERD---EWSNTLEAMQAALQLEKTVNQALLDLHKL 117

Query: 239 AGDLSDPNVQNFLD-DYLMEQVNSIASLQVLISRFEKL--KNTELAQFLIDQ 93
           A D  DP + +FL+ +YL EQV ++  L   I+  ++L      + ++L D+
Sbjct: 118 ASDKVDPQLCDFLESEYLEEQVKAMKELGDYITNLKRLGVPQNGMGEYLFDK 169
>sp|P09528|FRIH_MOUSE Ferritin heavy chain (Ferritin H subunit)
          Length = 182

 Score =  112 bits (280), Expect = 8e-25
 Identities = 64/168 (38%), Positives = 100/168 (59%), Gaps = 3/168 (1%)
 Frame = -1

Query: 587 VRQNLNITIEDGLNSQINTELKAFYIYESMAAFFQRPDVGLEGFEKFFRKSADEELKHAR 408
           VRQN +   E  +N QIN EL A Y+Y SM+ +F R DV L+ F K+F   + EE +HA 
Sbjct: 9   VRQNYHQDAEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAE 68

Query: 407 DMIEYINKRGGKYIPKPISLSSSDAKITWDGALDAVKDAMIKEKEVNAAIIELHKTAGDL 228
            +++  N+RGG+   + I     D    W+  L+A++ A+  EK VN +++ELHK A D 
Sbjct: 69  KLMKLQNQRGGRIFLQDIKKPDRD---DWESGLNAMECALHLEKSVNQSLLELHKLATDK 125

Query: 227 SDPNVQNFLDD-YLMEQVNSIASLQVLISRFEKLKNTE--LAQFLIDQ 93
           +DP++ +F++  YL EQV SI  L   ++   K+   E  +A++L D+
Sbjct: 126 NDPHLCDFIETYYLSEQVKSIKELGDHVTNLRKMGAPEAGMAEYLFDK 173
>sp|P19132|FRIH_RAT Ferritin heavy chain (Ferritin H subunit)
          Length = 182

 Score =  112 bits (279), Expect = 1e-24
 Identities = 64/168 (38%), Positives = 100/168 (59%), Gaps = 3/168 (1%)
 Frame = -1

Query: 587 VRQNLNITIEDGLNSQINTELKAFYIYESMAAFFQRPDVGLEGFEKFFRKSADEELKHAR 408
           VRQN +   E  +N QIN EL A Y+Y SM+ +F R DV L+ F K+F   + EE +HA 
Sbjct: 9   VRQNYHQDSEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAE 68

Query: 407 DMIEYINKRGGKYIPKPISLSSSDAKITWDGALDAVKDAMIKEKEVNAAIIELHKTAGDL 228
            +++  N+RGG+   + I     D    W+  L+A++ A+  EK VN +++ELHK A D 
Sbjct: 69  KLMKLQNQRGGRIFLQDIKKPDRD---DWESGLNAMRCALHLEKSVNQSLLELHKLATDK 125

Query: 227 SDPNVQNFLD-DYLMEQVNSIASLQVLISRFEKLKNTE--LAQFLIDQ 93
           +DP++ +F++  YL EQV SI  L   ++   K+   E  +A++L D+
Sbjct: 126 NDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGAPESGMAEYLFDK 173
>sp|P29389|FRIH_CRIGR Ferritin heavy chain (Ferritin H subunit)
          Length = 186

 Score =  111 bits (278), Expect = 1e-24
 Identities = 64/168 (38%), Positives = 100/168 (59%), Gaps = 3/168 (1%)
 Frame = -1

Query: 587 VRQNLNITIEDGLNSQINTELKAFYIYESMAAFFQRPDVGLEGFEKFFRKSADEELKHAR 408
           VRQN +   E  +N QIN EL A Y+Y SM+ +F R DV L+ F K+F   + EE +HA 
Sbjct: 14  VRQNYHQDSEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAE 73

Query: 407 DMIEYINKRGGKYIPKPISLSSSDAKITWDGALDAVKDAMIKEKEVNAAIIELHKTAGDL 228
            +++  N+RGG+   + I     D    W+  L+A++ A+  EK VN +++ELHK A D 
Sbjct: 74  KLMKLQNQRGGRIFLQDIKKPDRD---DWESGLNAMECALHLEKSVNQSLLELHKLATDK 130

Query: 227 SDPNVQNFLD-DYLMEQVNSIASLQVLISRFEKLKNTE--LAQFLIDQ 93
           +DP++ +F++  YL EQV SI  L   ++   K+   E  +A++L D+
Sbjct: 131 NDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGAPEAGMAEYLFDK 178
>sp|P07798|FRI2_RANCA Ferritin, middle subunit (Ferritin M) (Ferritin X) (Ferritin H')
          Length = 176

 Score =  111 bits (277), Expect = 2e-24
 Identities = 65/172 (37%), Positives = 98/172 (56%), Gaps = 3/172 (1%)
 Frame = -1

Query: 587 VRQNLNITIEDGLNSQINTELKAFYIYESMAAFFQRPDVGLEGFEKFFRKSADEELKHAR 408
           VRQN +   E  +N  +N EL A Y Y SM AFF R DV L    +FF++ + EE +HA 
Sbjct: 5   VRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAE 64

Query: 407 DMIEYINKRGGKYIPKPISLSSSDAKITWDGALDAVKDAMIKEKEVNAAIIELHKTAGDL 228
             ++Y NKRGG+ + + I     D    W   L+A++ A+  EK VN A+++LHK A D 
Sbjct: 65  KFMKYQNKRGGRVVLQDIKKPERD---EWGNTLEAMQAALQLEKTVNQALLDLHKLATDK 121

Query: 227 SDPNVQNFLD-DYLMEQVNSIASLQVLISRFEKLKNTE--LAQFLIDQELKK 81
            DP++ +FL+ +YL EQV  I  +   I+  ++L   E  + ++L D+   K
Sbjct: 122 VDPHLCDFLESEYLEEQVKDIKRIGDFITNLKRLGLPENGMGEYLFDKHSVK 173
>sp|Q5R8J7|FRIH_PONPY Ferritin heavy chain (Ferritin H subunit)
          Length = 183

 Score =  111 bits (277), Expect = 2e-24
 Identities = 65/168 (38%), Positives = 100/168 (59%), Gaps = 3/168 (1%)
 Frame = -1

Query: 587 VRQNLNITIEDGLNSQINTELKAFYIYESMAAFFQRPDVGLEGFEKFFRKSADEELKHAR 408
           VRQN +   E  +N QIN EL A Y+Y SM+ +F R DV L+ F K+F   + EE +HA 
Sbjct: 9   VRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAE 68

Query: 407 DMIEYINKRGGKYIPKPISLSSSDAKITWDGALDAVKDAMIKEKEVNAAIIELHKTAGDL 228
            +++  N+RGG+   + I     D    W+  L+A++ A+  EK VN +++ELHK A D 
Sbjct: 69  KLMKLQNQRGGRIFLQDIKKPDCD---DWESGLNAMECALHLEKNVNQSLLELHKLATDK 125

Query: 227 SDPNVQNFLD-DYLMEQVNSIASLQVLISRFEKLKNTE--LAQFLIDQ 93
           +DP++ +FL+  YL EQV +I  L   ++   K+   E  LA++L D+
Sbjct: 126 NDPHLCDFLETHYLNEQVKAIKELGDHVTNLRKMGAPESGLAEYLFDK 173
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,056,387
Number of Sequences: 369166
Number of extensions: 1282403
Number of successful extensions: 3429
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3380
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5316264630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)