Planaria EST Database


DrC_01263

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01263
         (320 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q01105|SET_HUMAN  SET protein (Phosphatase 2A inhibitor I...    74   1e-13
sp|Q9EQU5|SET_MOUSE  SET protein (Phosphatase 2A inhibitor I...    74   1e-13
sp|Q63945|SET_RAT  SET protein (Phosphatase 2A inhibitor I2P...    74   1e-13
sp|P53997|SET_DROME  SET protein                                   72   3e-13
sp|Q8VD63|TSYL4_MOUSE  Testis-specific Y-encoded-like protei...    58   6e-09
sp|Q9UJ04|TSYL4_HUMAN  Testis-specific Y-encoded-like protei...    56   3e-08
sp|Q9H0U9|TSYL1_HUMAN  Testis-specific Y-encoded-like protei...    55   4e-08
sp|O88852|TSYL1_MOUSE  Testis-specific Y-encoded-like protei...    55   5e-08
sp|Q9H489|TSY3_HUMAN  Testis-specific Y-encoded-like protein...    54   8e-08
sp|Q01534|TSPY1_HUMAN  Testis-specific Y-encoded protein 1         45   7e-05
>sp|Q01105|SET_HUMAN SET protein (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A)
           (Template-activating factor I) (TAF-I) (HLA-DR
           associated protein II) (PHAPII) (Inhibitor of granzyme
           A-activated DNase) (IGAAD)
          Length = 290

 Score = 73.9 bits (180), Expect = 1e-13
 Identities = 39/73 (53%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
 Frame = +3

Query: 3   KSTNIEWHAGKSLVKVDPK-----NRKRQAQAMLDSFFNWFEGSSDMLNDEIGEVIKDDI 167
           KST I+W +GK L K   +     +RKRQ +   +SFF WF   SD   DE+GEVIKDDI
Sbjct: 167 KSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEP-ESFFTWFTDHSDAGADELGEVIKDDI 225

Query: 168 WNNPMQYYLSSDM 206
           W NP+QYYL  DM
Sbjct: 226 WPNPLQYYLVPDM 238
>sp|Q9EQU5|SET_MOUSE SET protein (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A)
           (Template-activating factor I) (TAF-I)
          Length = 289

 Score = 73.9 bits (180), Expect = 1e-13
 Identities = 39/73 (53%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
 Frame = +3

Query: 3   KSTNIEWHAGKSLVKVDPK-----NRKRQAQAMLDSFFNWFEGSSDMLNDEIGEVIKDDI 167
           KST I+W +GK L K   +     +RKRQ +   +SFF WF   SD   DE+GEVIKDDI
Sbjct: 166 KSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEP-ESFFTWFTDHSDAGADELGEVIKDDI 224

Query: 168 WNNPMQYYLSSDM 206
           W NP+QYYL  DM
Sbjct: 225 WPNPLQYYLVPDM 237
>sp|Q63945|SET_RAT SET protein (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A)
           (Template-activating factor I) (TAF-I) (Liver
           regeneration-related protein LRRGR00002)
          Length = 289

 Score = 73.9 bits (180), Expect = 1e-13
 Identities = 39/73 (53%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
 Frame = +3

Query: 3   KSTNIEWHAGKSLVKVDPK-----NRKRQAQAMLDSFFNWFEGSSDMLNDEIGEVIKDDI 167
           KST I+W +GK L K   +     +RKRQ +   +SFF WF   SD   DE+GEVIKDDI
Sbjct: 166 KSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEP-ESFFTWFTDHSDAGADELGEVIKDDI 224

Query: 168 WNNPMQYYLSSDM 206
           W NP+QYYL  DM
Sbjct: 225 WPNPLQYYLVPDM 237
>sp|P53997|SET_DROME SET protein
          Length = 269

 Score = 72.4 bits (176), Expect = 3e-13
 Identities = 32/70 (45%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
 Frame = +3

Query: 6   STNIEWHAGKSLVKV---DPKNRKRQAQAMLDSFFNWFEGSSDMLNDEIGEVIKDDIWNN 176
           ST I+W  GK+L+K+    P   K++  +   +FF+WF  ++D +NDEI E+IKDD+W N
Sbjct: 162 STPIKWKEGKNLLKLLLTKPYGNKKKRNSEYKTFFDWFSDNTDPVNDEIAELIKDDLWPN 221

Query: 177 PMQYYLSSDM 206
           P+QYYL  D+
Sbjct: 222 PLQYYLVPDI 231
>sp|Q8VD63|TSYL4_MOUSE Testis-specific Y-encoded-like protein 4 (TSPY-like 4)
          Length = 406

 Score = 58.2 bits (139), Expect = 6e-09
 Identities = 28/66 (42%), Positives = 38/66 (57%)
 Frame = +3

Query: 6   STNIEWHAGKSLVKVDPKNRKRQAQAMLDSFFNWFEGSSDMLNDEIGEVIKDDIWNNPMQ 185
           ST I WH G+       +NR+      + SFFNWF   S +  D I E+IK ++W+NP+Q
Sbjct: 319 STPIRWHRGQEPQAHIHRNREGNT---IPSFFNWFSDHSLLEFDRIAEIIKGELWSNPLQ 375

Query: 186 YYLSSD 203
           YYL  D
Sbjct: 376 YYLMGD 381
>sp|Q9UJ04|TSYL4_HUMAN Testis-specific Y-encoded-like protein 4 (TSPY-like 4)
          Length = 414

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
 Frame = +3

Query: 6   STNIEWHAGKSLVKVDPK---NRKRQAQAMLDSFFNWFEGSSDMLNDEIGEVIKDDIWNN 176
           ST I WH G+     DP+   +R R+    + SFFNWF   S +  D I E+IK ++W N
Sbjct: 327 STPIRWHRGQ-----DPQAHIHRNREGNT-IPSFFNWFSDHSLLEFDRIAEIIKGELWPN 380

Query: 177 PMQYYLSSD 203
           P+QYYL  +
Sbjct: 381 PLQYYLMGE 389
>sp|Q9H0U9|TSYL1_HUMAN Testis-specific Y-encoded-like protein 1 (TSPY-like 1)
          Length = 438

 Score = 55.5 bits (132), Expect = 4e-08
 Identities = 27/63 (42%), Positives = 39/63 (61%)
 Frame = +3

Query: 6   STNIEWHAGKSLVKVDPKNRKRQAQAMLDSFFNWFEGSSDMLNDEIGEVIKDDIWNNPMQ 185
           ST I W  G      +P++  R+ Q ++ SFF WF   S   +D+I E+IK+D+W NP+Q
Sbjct: 353 STPIIWRRGH-----EPQSFIRRNQDLICSFFTWFSDHSLPESDKIAEIIKEDLWPNPLQ 407

Query: 186 YYL 194
           YYL
Sbjct: 408 YYL 410
>sp|O88852|TSYL1_MOUSE Testis-specific Y-encoded-like protein 1 (TSPY-like 1)
          Length = 379

 Score = 55.1 bits (131), Expect = 5e-08
 Identities = 27/63 (42%), Positives = 38/63 (60%)
 Frame = +3

Query: 6   STNIEWHAGKSLVKVDPKNRKRQAQAMLDSFFNWFEGSSDMLNDEIGEVIKDDIWNNPMQ 185
           ST I W  G      +P++  R+ Q ++ SFF WF   S   +D I E+IK+D+W NP+Q
Sbjct: 294 STPIIWRRGH-----EPQSFIRRNQDLICSFFTWFSDHSLPESDRIAEIIKEDLWPNPLQ 348

Query: 186 YYL 194
           YYL
Sbjct: 349 YYL 351
>sp|Q9H489|TSY3_HUMAN Testis-specific Y-encoded-like protein 3 (TSPY-like 3)
          Length = 355

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 26/66 (39%), Positives = 37/66 (56%)
 Frame = +3

Query: 6   STNIEWHAGKSLVKVDPKNRKRQAQAMLDSFFNWFEGSSDMLNDEIGEVIKDDIWNNPMQ 185
           +T I WH G+    +  +NR       + SFF+WF   S    D + ++IKDD+W NP+Q
Sbjct: 269 ATRIRWHWGQEPPALVHRNRDT-----VRSFFSWFSQHSLPEADRVAQIIKDDLWPNPLQ 323

Query: 186 YYLSSD 203
           YYL  D
Sbjct: 324 YYLLGD 329
>sp|Q01534|TSPY1_HUMAN Testis-specific Y-encoded protein 1
          Length = 308

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 21/62 (33%), Positives = 36/62 (58%)
 Frame = +3

Query: 6   STNIEWHAGKSLVKVDPKNRKRQAQAMLDSFFNWFEGSSDMLNDEIGEVIKDDIWNNPMQ 185
           ST IEW+      +V+   R+    ++  +FFNWF   +   +++I E++  D+W NP+Q
Sbjct: 232 STPIEWYPD---YEVEAYRRRHHNSSL--NFFNWFSDHNFAGSNKIAEILCKDLWRNPLQ 286

Query: 186 YY 191
           YY
Sbjct: 287 YY 288
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,628,240
Number of Sequences: 369166
Number of extensions: 340461
Number of successful extensions: 1023
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 68,354,980
effective HSP length: 75
effective length of database: 54,499,855
effective search space used: 1689495505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)