Planaria EST Database


DrC_01260

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01260
         (790 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q04323|U33K_HUMAN  UBA/UBX 33.3 kDa protein                     71   4e-12
sp|Q922Y1|U33K_MOUSE  UBA/UBX 33.3 kDa protein                     71   4e-12
sp|Q8VCH8|UBXD2_MOUSE  UBX domain-containing protein 2             69   2e-11
sp|Q92575|UBXD2_HUMAN  UBX domain-containing protein 2             67   6e-11
sp|Q10483|YDFB_SCHPO  Hypothetical protein C17C9.11c in chro...    48   3e-05
sp|P53935|YNJ1_YEAST  Hypothetical 141.5 kDa protein in YPT5...    44   4e-04
sp|P22793|TRHY_SHEEP  Trichohyalin                                 43   0.001
sp|Q7TNY6|GCP60_RAT  Golgi resident protein GCP60 (Acyl-CoA-...    40   0.006
sp|Q9UPA5|BSN_HUMAN  Bassoon protein (Zinc-finger protein 231)     40   0.006
sp|P93788|REMO_SOLTU  Remorin (pp34)                               40   0.010
>sp|Q04323|U33K_HUMAN UBA/UBX 33.3 kDa protein
          Length = 297

 Score = 70.9 bits (172), Expect = 4e-12
 Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 12/191 (6%)
 Frame = +3

Query: 15  GLQAALDWLISHK--PDVPQE----------NLPSSSVEECELEDSDNKEGDKMVPLAKS 158
           G++AA+DWL+ H+  PDV +             P+SS E+  LE S +  G+    L++ 
Sbjct: 31  GIEAAMDWLMEHEDDPDVDEPLETPLGHILGREPTSS-EQGGLEGSGSAAGEGKPALSEE 89

Query: 159 MKCDDCGKLLPKESDVQFHATKFGHLNFSESLEEIKPLTXXXXXXXXXXXXXXXXXXRVE 338
            + +   ++L   +  Q                                          E
Sbjct: 90  ERQEQTKRMLELVAQKQR-----------------------------------------E 108

Query: 339 REAFEAKESLERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRREKEEDRLYREKLKNQI 518
           RE  E +E+LERER RR+QG+ +  A+ + +EDE++R AE++RREK E+   R++++ +I
Sbjct: 109 REEREEREALERERQRRRQGQELSAARQRLQEDEMRRAAEERRREKAEELAARQRVREKI 168

Query: 519 ALDRETRKKKF 551
             D+  R KK+
Sbjct: 169 ERDKAERAKKY 179

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 20/60 (33%), Positives = 30/60 (50%)
 Frame = +1

Query: 556 PYPPKEIPIVNPPSEIEAPVRNFDSCKIQVRHSQGASIVETFSPNDSLFKVALWFSQKTG 735
           P  P+  P+ + PS+     R +D C+IQVR   G S+ +TF   + L  V L+     G
Sbjct: 189 PVAPEPGPVPSSPSQEPPTKREYDQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVELHRG 248
>sp|Q922Y1|U33K_MOUSE UBA/UBX 33.3 kDa protein
          Length = 297

 Score = 70.9 bits (172), Expect = 4e-12
 Identities = 34/81 (41%), Positives = 55/81 (67%)
 Frame = +3

Query: 336 EREAFEAKESLERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRREKEEDRLYREKLKNQ 515
           ERE  E +E+LERE+ RR+QG+ +  A+ K +EDE++R AE++RREK E+   R++++ +
Sbjct: 108 EREEREEREALEREKQRRRQGQELSVARQKLQEDEMRRAAEERRREKAEELAARQRVREK 167

Query: 516 IALDRETRKKKFPAISAKRNS 578
           I  D+  R KK+      R+S
Sbjct: 168 IERDKAERAKKYGGSVGSRSS 188

 Score = 38.5 bits (88), Expect = 0.021
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +1

Query: 577 PIVNPPSEIEAPVRNFDSCKIQVRHSQGASIVETFSPNDSLFKVALWFSQKTG 735
           P+ + PS+     R +D C+IQVR   G S+ +TF   + L  V L+     G
Sbjct: 196 PVPSSPSQEPPTKREYDQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVELHRG 248
>sp|Q8VCH8|UBXD2_MOUSE UBX domain-containing protein 2
          Length = 506

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 34/74 (45%), Positives = 49/74 (66%)
 Frame = +3

Query: 330 RVEREAFEAKESLERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRREKEEDRLYREKLK 509
           R E+   EA+  +++E  RR+ GK ++D K K EE+  KR+ E++ REK EDR  RE++K
Sbjct: 209 REEKRKEEAQREIKKEIERRKTGKEMLDYKRKQEEELTKRMLEERSREKAEDRAARERIK 268

Query: 510 NQIALDRETRKKKF 551
            QIALDR  R  +F
Sbjct: 269 QQIALDRAERAARF 282
>sp|Q92575|UBXD2_HUMAN UBX domain-containing protein 2
          Length = 508

 Score = 67.0 bits (162), Expect = 6e-11
 Identities = 33/74 (44%), Positives = 48/74 (64%)
 Frame = +3

Query: 330 RVEREAFEAKESLERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRREKEEDRLYREKLK 509
           R E+   E +  +++E  RR+ GK ++D K K EE+  KR+ E++ REK EDR  RE++K
Sbjct: 210 REEKRKEEEQREIKKEIERRKTGKEMLDYKRKQEEELTKRMLEERNREKAEDRAARERIK 269

Query: 510 NQIALDRETRKKKF 551
            QIALDR  R  +F
Sbjct: 270 QQIALDRAERAARF 283
>sp|Q10483|YDFB_SCHPO Hypothetical protein C17C9.11c in chromosome I
          Length = 240

 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
 Frame = +3

Query: 159 MKCDDCGKLLPKESDVQFHATKFGHLNFSESLEEIKPLTXXXXXXXXXXXXXXXXXXRVE 338
           +KC +C KLL      +FH+TK  H  F E+ EEIK  +                     
Sbjct: 3   LKCLECDKLLSSIEMAEFHSTKTSHDQFEETEEEIKKRSPEEL----------------- 45

Query: 339 REAFEAKESLERERYRRQQGKTIIDAKTKYE--EDELKRLAEQKRREKEEDRLY-REKLK 509
           ++A EA     +E+  +++   + + KT Y+  +      A+  R+ +++ RL   +K++
Sbjct: 46  KQAIEALREKAKEKKEKERILALEEKKTNYKILQKSNDETAQAMRKMQDQARLRDLQKIR 105

Query: 510 NQIALDRETRKK 545
            Q A D E RKK
Sbjct: 106 QQKAEDAEQRKK 117
>sp|P53935|YNJ1_YEAST Hypothetical 141.5 kDa protein in YPT53-RHO2 intergenic region
          Length = 1240

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = +3

Query: 330 RVEREAFEAKESLERERYRRQ-QGKTIIDAKTKYEEDELKRLAEQKRREKEEDRLYREKL 506
           R E +    KE  ERE  RR+ Q K + +AK K +E+  +RL EQ+RRE+ +++  + K 
Sbjct: 670 REEEKERLKKELEEREMRRREAQRKKVEEAKRKKDEERKRRLEEQQRREEMQEK--QRKQ 727

Query: 507 KNQIALDRETRKKK 548
           K ++   RE  KK+
Sbjct: 728 KEELKRKREEEKKR 741

 Score = 38.5 bits (88), Expect = 0.021
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
 Frame = +3

Query: 351 EAKESLERERYRR---QQGKTIIDAKTKYEEDELKRLAEQ-KRREKEEDRLYREKLKNQI 518
           EAK   + ER RR   QQ +  +  K + +++ELKR  E+ K+R +E+ RL +EKL+ + 
Sbjct: 698 EAKRKKDEERKRRLEEQQRREEMQEKQRKQKEELKRKREEEKKRIREQKRLEQEKLQKEK 757

Query: 519 ALDRETRKKKFPAISAKRNSDCQSS 593
             +   R     A+  ++ ++ Q+S
Sbjct: 758 EEEERQRLIAEDALRKQKLNEEQTS 782

 Score = 33.1 bits (74), Expect = 0.89
 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
 Frame = +3

Query: 360 ESLERERYRRQQGKTIIDAKTKYEEDELKRLA------EQKRREKEEDRLYREKLKNQIA 521
           + LE E+ R+++ K     K + +E E KRL       E+++RE+E++RL +E L+ +  
Sbjct: 629 QELEEEK-RKKREKEEKKQKKREKEKEKKRLQQLAKEEEKRKREEEKERLKKE-LEEREM 686

Query: 522 LDRETRKKKFPAISAKRNSD 581
             RE ++KK     AKR  D
Sbjct: 687 RRREAQRKKVE--EAKRKKD 704
>sp|P22793|TRHY_SHEEP Trichohyalin
          Length = 1549

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = +3

Query: 330 RVEREAFEAKESLERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRR-EKEEDRLYREKL 506
           +VE +  E  +  ERE+ R+++ K  ++     EE++L+R   QKRR E+E+  L + +L
Sbjct: 539 KVELQEEEQLQRQEREKRRQEREKQYLEKVELQEEEQLQRQERQKRRQEREKQYLEKVEL 598

Query: 507 KNQIALDRETRKKK 548
           + +  L R+ R+K+
Sbjct: 599 QEEEQLQRQEREKR 612

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 21/74 (28%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = +3

Query: 330 RVEREAFEAKESLERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRR-EKEEDRLYREKL 506
           R++RE  + +     +R R+++ K  ++    +EE++L+R   +KRR E+E+  L + +L
Sbjct: 427 RLQREEEQLQREEREKRRRQEREKQYLEKVELWEEEQLQREEREKRRQEREKQYLEKVEL 486

Query: 507 KNQIALDRETRKKK 548
           + +  L R+ R+K+
Sbjct: 487 REEEQLQRQEREKR 500

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
 Frame = +3

Query: 330 RVEREAFEAKESLERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRREKEEDRLYREK-- 503
           +VE    E  +  ERE+ R+++ K  ++     EE++L+R   +KRR+ E +R Y EK  
Sbjct: 455 KVELWEEEQLQREEREKRRQEREKQYLEKVELREEEQLQRQEREKRRQ-ERERQYLEKVE 513

Query: 504 LKNQIALDRETRKKK 548
           L+ +  L RE R+K+
Sbjct: 514 LQEEEQLQREEREKR 528

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 22/74 (29%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
 Frame = +3

Query: 330 RVEREAFEAKESLERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRR-EKEEDRLYREKL 506
           +VE +  E  +  ERE+ R+++ +  ++     EE++L+R   +KRR E+E+  L + +L
Sbjct: 511 KVELQEEEQLQREEREKRRQERERQYLEKVELQEEEQLQRQEREKRRQEREKQYLEKVEL 570

Query: 507 KNQIALDRETRKKK 548
           + +  L R+ R+K+
Sbjct: 571 QEEEQLQRQERQKR 584

 Score = 39.3 bits (90), Expect = 0.012
 Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
 Frame = +3

Query: 330 RVEREAFEAKESLERERYRRQQGKTIIDAKTKYEEDELKRLAEQ-------KRREKEEDR 488
           R E +    +E L+RE+ R+++ +   + + + EE+ L+R  EQ       KRR +E ++
Sbjct: 391 REEEQLRLKEEKLQREKRRQERERQYREVELQREEERLQREEEQLQREEREKRRRQEREK 450

Query: 489 LYREKLK--NQIALDRETRKKK 548
            Y EK++   +  L RE R+K+
Sbjct: 451 QYLEKVELWEEEQLQREEREKR 472

 Score = 39.3 bits (90), Expect = 0.012
 Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
 Frame = +3

Query: 330 RVEREAFEAKESLERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRREKEEDRLYREK-- 503
           +VE    E  +  ERE+ R+++ +  ++     EE++L+R   +KRR+ E +R Y EK  
Sbjct: 483 KVELREEEQLQRQEREKRRQERERQYLEKVELQEEEQLQREEREKRRQ-ERERQYLEKVE 541

Query: 504 LKNQIALDRETRKKK 548
           L+ +  L R+ R+K+
Sbjct: 542 LQEEEQLQRQEREKR 556

 Score = 39.3 bits (90), Expect = 0.012
 Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
 Frame = +3

Query: 330 RVEREAFEAKESLERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRREKEEDRLYREK-- 503
           +VE +  E  +  ER++ R+++ K  ++     EE++L+R   +KRR+ E +R Y EK  
Sbjct: 567 KVELQEEEQLQRQERQKRRQEREKQYLEKVELQEEEQLQRQEREKRRQ-ERERQYLEKVE 625

Query: 504 LKNQIALDRETRKKK 548
           L+ +  + R+ R+K+
Sbjct: 626 LQEEEQVQRQEREKR 640

 Score = 38.9 bits (89), Expect = 0.016
 Identities = 24/67 (35%), Positives = 39/67 (58%)
 Frame = +3

Query: 348  FEAKESLERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRREKEEDRLYREKLKNQIALD 527
            F A++ LERE+ +  + +   D K + EE  LK   E+K R  EEDR +RE+ +    L+
Sbjct: 920  FPAEQLLEREQQKETERR---DRKFREEEQLLKGQREEKIRYLEEDRKFREEEQQLRRLE 976

Query: 528  RETRKKK 548
            RE + ++
Sbjct: 977  REQQLRQ 983

 Score = 36.6 bits (83), Expect = 0.081
 Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
 Frame = +3

Query: 330 RVEREAFEAKESLERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRREKEEDRLYREK-- 503
           +VE +  E  +  ERE+ R+++ +  ++     EE++++R   +KRR+ E +R Y EK  
Sbjct: 595 KVELQEEEQLQRQEREKRRQERERQYLEKVELQEEEQVQRQEREKRRQ-ERERQYLEKEL 653

Query: 504 ------LKNQIALDRETRKKK 548
                 L+ +  L RE R+K+
Sbjct: 654 QRQEERLQEEEQLLREEREKR 674

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 20/80 (25%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
 Frame = +3

Query: 330 RVEREAFEAKESLERERYRRQQGKTIIDAKTKYEEDEL-------KRLAEQKRREKEEDR 488
           +VE +  E  +  ERE+ R+++ +  ++ + + +E+ L       +   E++R+E+E   
Sbjct: 623 KVELQEEEQVQRQEREKRRQERERQYLEKELQRQEERLQEEEQLLREEREKRRQERERQY 682

Query: 489 LYREKLKNQIALDRETRKKK 548
           L + +L+ +  L RE R+K+
Sbjct: 683 LEKVELQEEEQLQREEREKR 702

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
 Frame = +3

Query: 336 EREAFEAKESL---ERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRREKEEDRLYREKL 506
           + E  + +E L   ERE+ R+++ +  ++     EE++L+R   +KRR +E +R Y EK 
Sbjct: 656 QEERLQEEEQLLREEREKRRQERERQYLEKVELQEEEQLQREEREKRR-QERERQYLEKE 714

Query: 507 KNQIALDRETRKKK 548
           + Q   +R  R+K+
Sbjct: 715 ELQRQEERLQREKE 728

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
 Frame = +3

Query: 336  EREAFEAKESLERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRREKEEDRLYREKL--K 509
            E+  +  K  L+RE  + Q+ K   + + +Y E+EL  L E++R  ++E +L RE+   +
Sbjct: 770  EKRQYLEKVELQREEEQLQREKRRQERERQYREEEL--LREEERLHRKEQQLQREECEKR 827

Query: 510  NQIALDRETRKKKFPAISAKR 572
             +  L+R+  +++   +  KR
Sbjct: 828  RRQELERQLEEEELQRLDRKR 848

 Score = 35.0 bits (79), Expect = 0.23
 Identities = 20/66 (30%), Positives = 39/66 (59%)
 Frame = +3

Query: 336 EREAFEAKESLERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRREKEEDRLYREKLKNQ 515
           +RE    +E L  +  + Q+ K   + + +Y E EL+R  E++R ++EE++L RE+ + +
Sbjct: 386 QREQVREEEQLRLKEEKLQREKRRQERERQYREVELQR--EEERLQREEEQLQREEREKR 443

Query: 516 IALDRE 533
              +RE
Sbjct: 444 RRQERE 449

 Score = 35.0 bits (79), Expect = 0.23
 Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
 Frame = +3

Query: 330  RVEREA-FEAKESL--ERERYRRQQGKTIIDAKTK---YEEDELKRLAEQKRREKEEDRL 491
            R ER+  F  +E L  ERE+ RRQ+ +  +  +     +EE++L +  E++ R +E DR 
Sbjct: 1194 RQERDRKFREEEQLLQEREKLRRQEREPQLRQERDRKFHEEEQLLQEREEQLRRQERDRK 1253

Query: 492  YREKL----KNQIALDRETRKKKF 551
            +RE+     + +  L R+ R +KF
Sbjct: 1254 FREEAQLLQEREEQLRRQERDRKF 1277

 Score = 34.3 bits (77), Expect = 0.40
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
 Frame = +3

Query: 330 RVEREAFEAKESLERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRR------EKEEDRL 491
           R +R     ++ LE+E  +RQ+ +   + +    ED  KR   ++R+      ++EEDRL
Sbjct: 699 REKRRQERERQYLEKEELQRQEERLQREKEQLQREDREKRRQVRERKYLEEELQQEEDRL 758

Query: 492 YREKLKNQIALDRETRKKK 548
            REK      L RE R+K+
Sbjct: 759 QREK-----QLLREDREKR 772

 Score = 34.3 bits (77), Expect = 0.40
 Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
 Frame = +3

Query: 357 KESLERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRREKEEDRLYREKLKNQI---ALD 527
           +E L+RE+ R+++ +   + +   EE+ L R  +Q +RE+ E R  R++L+ Q+    L 
Sbjct: 784 EEQLQREKRRQERERQYREEELLREEERLHRKEQQLQREECEKRR-RQELERQLEEEELQ 842

Query: 528 RETRKKKF 551
           R  RK++F
Sbjct: 843 RLDRKRQF 850

 Score = 33.9 bits (76), Expect = 0.52
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 10/84 (11%)
 Frame = +3

Query: 330  RVEREAFEAKESLERER---YRRQQGKTIIDAKTK---YEEDELKRLAEQKRREKEEDRL 491
            R ER     +E L RER    R Q+G+  +  K     +EE++L +  E++ R +E DR 
Sbjct: 1088 RQERNRKFREEQLLREREEQLRLQEGEPQLRQKRDRKFHEEEQLLQEREEQLRRQERDRK 1147

Query: 492  YREKL----KNQIALDRETRKKKF 551
            +RE+     + +  L R+ R +KF
Sbjct: 1148 FREEAQILKEREEQLRRQERDRKF 1171

 Score = 33.5 bits (75), Expect = 0.68
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
 Frame = +3

Query: 330  RVEREA-FEAKESL--ERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRREKEEDRLYRE 500
            R ER+  F  +E L  ERE   R+Q +   D K + EE  L+   EQ RR+ E DR +RE
Sbjct: 1018 RQERDRKFREEEQLLQEREEQLRRQER---DRKFREEEQLLQEREEQLRRQ-ERDRKFRE 1073

Query: 501  KLKNQIALDRETRKKK 548
            + +    L+RE + ++
Sbjct: 1074 EEQQLRLLEREQQLRQ 1089

 Score = 33.1 bits (74), Expect = 0.89
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
 Frame = +3

Query: 330  RVEREA-FEAKESL--ERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRREKEEDRLYRE 500
            R ER+  F  +E L  ERE   R+Q +   D K + EE  L+   EQ RR+ E DR +RE
Sbjct: 1270 RQERDRKFREEEQLLQEREEQLRRQER---DRKFREEEQLLQEREEQLRRQ-ERDRKFRE 1325

Query: 501  K----LKNQIALDRETRKKKF 551
            +     +++  L R+ R +KF
Sbjct: 1326 EEQLLKESEEQLRRQERDRKF 1346

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 23/86 (26%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
 Frame = +3

Query: 336  EREAFEAKESLERERYRRQQGKTIIDAKTKYE---EDELKRLAEQKRR-EKEEDRLYR-- 497
            + E     E  E +R +RQ+ +  ++ +   +   E+E +R+ EQ R+  ++E++L+R  
Sbjct: 1372 QEEQLRRAEQEEEQRRQRQRDRKFLEEEQSLQREREEEKRRVQEQDRKFLEQEEQLHREE 1431

Query: 498  -EKLKNQIALDRETRKKKFPAISAKR 572
             E+L+ +  LD++ R ++  A   KR
Sbjct: 1432 QEELRRRQQLDQQYRAEEQFAREEKR 1457

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
 Frame = +3

Query: 351  EAKESLERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRREKEEDRLYREK----LKNQI 518
            EA+   ERE   R+Q +   D K + EE  L+   EQ RR+ E DR +RE+     + + 
Sbjct: 1257 EAQLLQEREEQLRRQER---DRKFREEEQLLQEREEQLRRQ-ERDRKFREEEQLLQEREE 1312

Query: 519  ALDRETRKKKF 551
             L R+ R +KF
Sbjct: 1313 QLRRQERDRKF 1323

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
 Frame = +3

Query: 351  EAKESLERER---YRRQQGKTIIDAKTKYEEDELKRLAEQKRREKEEDRLYREK----LK 509
            E ++ L +ER   +R +  +   D K + EE  L+   EQ RR+ E DR +RE+     +
Sbjct: 976  EREQQLRQERDRKFREELSRQERDRKFREEEQLLQEREEQLRRQ-ERDRKFREEEQLLQE 1034

Query: 510  NQIALDRETRKKKF 551
             +  L R+ R +KF
Sbjct: 1035 REEQLRRQERDRKF 1048

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 21/79 (26%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
 Frame = +3

Query: 330 RVEREAFEAKESLERERYRRQQG------KTIIDAKTKYEEDELKRLAEQKRREKEEDRL 491
           R ER+    ++ L+ E+ +RQ+G      + +   K + +E + +RL E+++ +K++ R 
Sbjct: 189 RFERQEQRERQRLQVEQQQRQRGELRERQEEVQLQKRETQELQRERLEEEQQLQKQK-RG 247

Query: 492 YREKLKNQIALDRETRKKK 548
             E+L  Q   ++E R+K+
Sbjct: 248 LEERLLEQERREQELRRKE 266
>sp|Q7TNY6|GCP60_RAT Golgi resident protein GCP60 (Acyl-CoA-binding domain-containing
           protein 3) (Golgi phosphoprotein 1) (GOLPH1) (Golgi
           complex-associated protein 1) (GOCAP1) (DMT1-associated
           protein) (DAP)
          Length = 526

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
 Frame = +3

Query: 330 RVEREAFEAKESLERERYRRQQGKTII----DAKTKYEEDELKRLAEQKRREKEEDRLYR 497
           R+E+E  E +   E ER +R++ +       + K K EE++  R  E++RR  EE+RL  
Sbjct: 177 RIEKEEEEKRRKAEEERRQREEEERERLQKEEEKRKREEEDRLRREEEERRRIEEERLRL 236

Query: 498 EKLKNQI--ALDRET 536
           E+ K QI  AL+ +T
Sbjct: 237 EQQKQQIMAALNSQT 251
>sp|Q9UPA5|BSN_HUMAN Bassoon protein (Zinc-finger protein 231)
          Length = 3926

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 20/70 (28%), Positives = 41/70 (58%)
 Frame = +3

Query: 333  VEREAFEAKESLERERYRRQQGKTIIDAKTKYEEDELKRLAEQKRREKEEDRLYREKLKN 512
            + R  FE +E+ + ER R+QQ + +   + + E ++L++L  Q+  E+E   L R + + 
Sbjct: 2349 LSRPGFEKEEASQEERQRKQQEQLLQLERERVELEKLRQLRLQEELERERVELQRHREEE 2408

Query: 513  QIALDRETRK 542
            Q+ + RE ++
Sbjct: 2409 QLLVQRELQE 2418
>sp|P93788|REMO_SOLTU Remorin (pp34)
          Length = 198

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
 Frame = +3

Query: 342 EAFEAKESLERERYRRQQGKTI---IDAKTKYEEDELKRLAEQKRREKEEDRLYREKLKN 512
           +A+E  E  + E   +++   I    ++K    E ELK++ EQ  ++K E   Y EK+KN
Sbjct: 94  KAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKMEEQLEKKKAE---YTEKMKN 150

Query: 513 QIALDRETRKKKFPAISAKRNSD 581
           +IAL  +  ++K   I AKR  D
Sbjct: 151 KIALLHKEAEEKRAMIEAKRGED 173
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,449,042
Number of Sequences: 369166
Number of extensions: 1425227
Number of successful extensions: 9402
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8928
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7454154400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)