Planaria EST Database


DrC_01250

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01250
         (379 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q22799|DYL1_CAEEL  Dynein light chain 1, cytoplasmic           161   4e-40
sp|Q9D0M5|DYL2_MOUSE  Dynein light chain 2, cytoplasmic (8 k...   161   5e-40
sp|O02414|DYL1_ANTCR  Dynein light chain LC6, flagellar oute...   161   5e-40
sp|Q24117|DYL1_DROME  Dynein light chain 1, cytoplasmic (8 k...   160   1e-39
sp|O96860|DYL2_DROME  Dynein light chain 2, cytoplasmic (8 k...   158   3e-39
sp|P63170|DYL1_RAT  Dynein light chain 1, cytoplasmic (8 kDa...   157   7e-39
sp|Q39580|DYL1_CHLRE  Dynein 8 kDa light chain, flagellar ou...   154   6e-38
sp|Q9Y3P0|DYLL_HUMAN  Putative dynein light chain protein DJ...   139   2e-33
sp|Q9UR05|DYL1_SCHPO  Dynein light chain 1, cytoplasmic           139   3e-33
sp|Q94748|DYL2_SCHMA  Probable dynein light chain (T-cell-st...   137   8e-33
>sp|Q22799|DYL1_CAEEL Dynein light chain 1, cytoplasmic
          Length = 89

 Score =  161 bits (408), Expect = 4e-40
 Identities = 75/87 (86%), Positives = 84/87 (96%)
 Frame = +3

Query: 15  ERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKTFNPTWHCIVGRNF 194
           +R+AVIKNADM+D+MQ+ AI+ ATQA+EK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNF
Sbjct: 3   DRKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNF 62

Query: 195 GSYVTHETKHFIYFYLGQVAILLFKSG 275
           GSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct: 63  GSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|Q9D0M5|DYL2_MOUSE Dynein light chain 2, cytoplasmic (8 kDa dynein light chain) (DLC8)
           (DLC8b)
 sp|Q96FJ2|DYL2_HUMAN Dynein light chain 2, cytoplasmic
 sp|Q78P75|DYL2_RAT Dynein light chain 2, cytoplasmic
          Length = 89

 Score =  161 bits (407), Expect = 5e-40
 Identities = 74/88 (84%), Positives = 85/88 (96%)
 Frame = +3

Query: 12  AERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKTFNPTWHCIVGRN 191
           ++R+AVIKNADM+++MQ+ A++ ATQAMEK+NIEKDIAAYIKKEFDK +NPTWHCIVGRN
Sbjct: 2   SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61

Query: 192 FGSYVTHETKHFIYFYLGQVAILLFKSG 275
           FGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct: 62  FGSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|O02414|DYL1_ANTCR Dynein light chain LC6, flagellar outer arm
          Length = 89

 Score =  161 bits (407), Expect = 5e-40
 Identities = 74/88 (84%), Positives = 84/88 (95%)
 Frame = +3

Query: 12  AERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKTFNPTWHCIVGRN 191
           +ER+AVIKNADM ++MQ+ A++ ATQA+EKFNIEKDIAAYIKKEFDK +NPTWHCIVGRN
Sbjct: 2   SERKAVIKNADMPEDMQQDAVDCATQALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61

Query: 192 FGSYVTHETKHFIYFYLGQVAILLFKSG 275
           FGSYVTHETKHFIYFYLGQVA+LLFKSG
Sbjct: 62  FGSYVTHETKHFIYFYLGQVAVLLFKSG 89
>sp|Q24117|DYL1_DROME Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (Cut
           up protein)
          Length = 89

 Score =  160 bits (404), Expect = 1e-39
 Identities = 73/88 (82%), Positives = 85/88 (96%)
 Frame = +3

Query: 12  AERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKTFNPTWHCIVGRN 191
           ++R+AVIKNADM++EMQ+ A++ ATQA+EK+NIEKDIAAYIKKEFDK +NPTWHCIVGRN
Sbjct: 2   SDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61

Query: 192 FGSYVTHETKHFIYFYLGQVAILLFKSG 275
           FGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 62  FGSYVTHETRHFIYFYLGQVAILLFKSG 89
>sp|O96860|DYL2_DROME Dynein light chain 2, cytoplasmic (8 kDa dynein light chain)
          Length = 89

 Score =  158 bits (400), Expect = 3e-39
 Identities = 72/88 (81%), Positives = 85/88 (96%)
 Frame = +3

Query: 12  AERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKTFNPTWHCIVGRN 191
           ++R+AVIKNADM++EMQ+ A++ ATQA+EK+NIEKDIAA+IKKEFDK +NPTWHCIVGRN
Sbjct: 2   SDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRN 61

Query: 192 FGSYVTHETKHFIYFYLGQVAILLFKSG 275
           FGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct: 62  FGSYVTHETRHFIYFYLGQVAILLFKSG 89
>sp|P63170|DYL1_RAT Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (DLC8)
           (Protein inhibitor of neuronal nitric oxide synthase)
           (PIN)
 sp|P63167|DYL1_HUMAN Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (DLC8)
           (Protein inhibitor of neuronal nitric oxide synthase)
           (PIN)
 sp|P63168|DYL1_MOUSE Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (DLC8)
           (Protein inhibitor of neuronal nitric oxide synthase)
           (PIN) (mPIN)
 sp|P61285|DYL1_BOVIN Dynein light chain 1, cytoplasmic
 sp|P61273|DYL1_MACFA Dynein light chain 1, cytoplasmic
 sp|P63169|DYL1_RABIT Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (DLC8)
           (Protein inhibitor of neuronal nitric oxide synthase)
           (PIN)
          Length = 89

 Score =  157 bits (397), Expect = 7e-39
 Identities = 72/87 (82%), Positives = 83/87 (95%)
 Frame = +3

Query: 15  ERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKTFNPTWHCIVGRNF 194
           +R+AVIKNADM++EMQ+ ++  ATQA+EK+NIEKDIAA+IKKEFDK +NPTWHCIVGRNF
Sbjct: 3   DRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNF 62

Query: 195 GSYVTHETKHFIYFYLGQVAILLFKSG 275
           GSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct: 63  GSYVTHETKHFIYFYLGQVAILLFKSG 89
>sp|Q39580|DYL1_CHLRE Dynein 8 kDa light chain, flagellar outer arm
          Length = 91

 Score =  154 bits (389), Expect = 6e-38
 Identities = 72/85 (84%), Positives = 80/85 (94%)
 Frame = +3

Query: 21  QAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKTFNPTWHCIVGRNFGS 200
           +AVIKNADM++EMQ  A++ ATQA+EK+NIEKDIAAYIKKEFD+  NPTWHCIVGRNFGS
Sbjct: 7   KAVIKNADMSEEMQADAVDCATQALEKYNIEKDIAAYIKKEFDRKHNPTWHCIVGRNFGS 66

Query: 201 YVTHETKHFIYFYLGQVAILLFKSG 275
           YVTHETKHFIYFYLGQVAILLFKSG
Sbjct: 67  YVTHETKHFIYFYLGQVAILLFKSG 91
>sp|Q9Y3P0|DYLL_HUMAN Putative dynein light chain protein DJ8B22.1
          Length = 89

 Score =  139 bits (351), Expect = 2e-33
 Identities = 64/86 (74%), Positives = 76/86 (88%)
 Frame = +3

Query: 18  RQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKTFNPTWHCIVGRNFG 197
           R+ +IKNADM++EMQ+ ++  A QA+EK+NIEKDIAA++KKEFDK  NPTWHCIVGRNFG
Sbjct: 4   RETMIKNADMSEEMQQDSVECAIQALEKYNIEKDIAAHLKKEFDKKNNPTWHCIVGRNFG 63

Query: 198 SYVTHETKHFIYFYLGQVAILLFKSG 275
           SY+T E KHFIYFYL QVAILLFKSG
Sbjct: 64  SYMTREIKHFIYFYLDQVAILLFKSG 89
>sp|Q9UR05|DYL1_SCHPO Dynein light chain 1, cytoplasmic
          Length = 85

 Score =  139 bits (349), Expect = 3e-33
 Identities = 64/84 (76%), Positives = 75/84 (89%)
 Frame = +3

Query: 24  AVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKTFNPTWHCIVGRNFGSY 203
           AVIK  DM+++MQ+ AI+ A QAMEKF IEKDIAA+IK+EFDK F+PTWHCIVGRNFGS+
Sbjct: 2   AVIKAVDMSEKMQQEAIHAAVQAMEKFTIEKDIAAFIKREFDKKFSPTWHCIVGRNFGSF 61

Query: 204 VTHETKHFIYFYLGQVAILLFKSG 275
           VTHE++HFIYFYLG VA LLFKSG
Sbjct: 62  VTHESRHFIYFYLGTVAFLLFKSG 85
>sp|Q94748|DYL2_SCHMA Probable dynein light chain (T-cell-stimulating antigen SM10)
          Length = 89

 Score =  137 bits (345), Expect = 8e-33
 Identities = 61/87 (70%), Positives = 76/87 (87%)
 Frame = +3

Query: 15  ERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKTFNPTWHCIVGRNF 194
           ER+AVIKNADM ++MQE A++ A  A++K+ IEKD+AAYIKKEFD+ +NP WHCIVG++F
Sbjct: 3   ERKAVIKNADMHEDMQETAVHTAAAALDKYEIEKDVAAYIKKEFDRKYNPNWHCIVGKHF 62

Query: 195 GSYVTHETKHFIYFYLGQVAILLFKSG 275
           GSYVTHET+HFIYFYL + A LLFKSG
Sbjct: 63  GSYVTHETQHFIYFYLQERAFLLFKSG 89
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,733,701
Number of Sequences: 369166
Number of extensions: 661448
Number of successful extensions: 1500
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1497
length of database: 68,354,980
effective HSP length: 92
effective length of database: 51,359,360
effective search space used: 1694858880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)