Planaria EST Database


DrC_01248

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01248
         (321 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O44783|SPY_DROME  Protein sprouty (Spry)                        31   1.0  
sp|P38565|MUCB1_XENLA  Integumentary mucin B.1 (FIM-B.1)           30   1.7  
sp|Q8L778|CESA5_ARATH  Cellulose synthase A catalytic subuni...    28   5.0  
sp|O81086|TPSD1_ABIGR  Alpha-bisabolene synthase ((E)-alpha-...    28   5.0  
sp|O08528|HXK2_MOUSE  Hexokinase type II (HK II)                   28   6.5  
sp|P27881|HXK2_RAT  Hexokinase type II (HK II)                     28   6.5  
sp|P52789|HXK2_HUMAN  Hexokinase, type II (HK II) (Muscle fo...    28   6.5  
sp|O97395|CLAPI_STYCL  Clavaspirin precursor                       28   6.5  
sp|P50867|CYSK_EMENI  Cysteine synthase (O-acetylserine sulf...    28   6.5  
sp|O18492|CLAVE_STYCL  Clavanin E precursor                        28   8.5  
>sp|O44783|SPY_DROME Protein sprouty (Spry)
          Length = 589

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = -3

Query: 244 DNLCSILHRCLLFLDQQFHIYLVNHR*SLQDKQLQ*P*RMQDKLHCEQQNQHH 86
           DN  +  H  LL   +  H++L  H+  LQ +Q Q   + Q +    QQNQ H
Sbjct: 220 DNGQTTTHHLLLLPQRNQHLHLQQHQQHLQQQQQQQQQQQQQQHLQHQQNQQH 272
>sp|P38565|MUCB1_XENLA Integumentary mucin B.1 (FIM-B.1)
          Length = 398

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -2

Query: 191 PHLSCKSSVIAPRQTTSVAVKNARQTTL*AAEPTPCRTSPTIPKIFSSFST 39
           P  +   S  AP +TT  +     +TT+ + E TP  +  T+P + S  ST
Sbjct: 36  PSETTGESTPAPSETTGESTPAPSETTVPSGESTPAPSETTVPSVPSGEST 86
>sp|Q8L778|CESA5_ARATH Cellulose synthase A catalytic subunit 5 [UDP-forming] (AtCesA-5)
          Length = 1069

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
 Frame = +3

Query: 21  SINGYES*KRRKNFR---NSW*GPTWCWFCC 104
           ++ G+++ K++K  R   N W  P WC FCC
Sbjct: 629 ALYGFDAPKKKKTKRMTCNCW--PKWCLFCC 657
>sp|O81086|TPSD1_ABIGR Alpha-bisabolene synthase ((E)-alpha-bisabolene synthase)
           (AgfEabis)
          Length = 817

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 130 FTATEVVCLGAITDDLQDKCGTVDQ 204
           F  T+V CL  + DD+ D  GT+D+
Sbjct: 553 FLFTKVACLQTVLDDMYDTYGTLDE 577
>sp|O08528|HXK2_MOUSE Hexokinase type II (HK II)
          Length = 917

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +1

Query: 40  VEKEEKIFGIVGEVLHGVGSAA--HNVVCLAFF 132
           VE   KI+ I  EV+HG G     H V C+A F
Sbjct: 553 VEMHNKIYSIPQEVMHGTGEELFDHIVQCIADF 585
>sp|P27881|HXK2_RAT Hexokinase type II (HK II)
          Length = 917

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +1

Query: 40  VEKEEKIFGIVGEVLHGVGSAA--HNVVCLAFF 132
           VE   KI+ I  EV+HG G     H V C+A F
Sbjct: 553 VEMHNKIYSIPQEVMHGTGEELFDHIVQCIADF 585
>sp|P52789|HXK2_HUMAN Hexokinase, type II (HK II) (Muscle form hexokinase)
          Length = 917

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +1

Query: 40  VEKEEKIFGIVGEVLHGVGSAA--HNVVCLAFF 132
           VE   KI+ I  EV+HG G     H V C+A F
Sbjct: 553 VEMHNKIYAIPQEVMHGTGDELFDHIVQCIADF 585
>sp|O97395|CLAPI_STYCL Clavaspirin precursor
          Length = 80

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 49  EEKIFGIVGEVLHGVGSAAHNV 114
           EEK    +G V+HG+G   H++
Sbjct: 27  EEKFLRFIGSVIHGIGHLVHHI 48
>sp|P50867|CYSK_EMENI Cysteine synthase (O-acetylserine sulfhydrylase) (O-acetylserine
           (Thiol)-lyase) (CSase)
          Length = 371

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +1

Query: 73  GEVLHGVGSAAHNVVCLAFFTATEVVCLGAITDDLQDKCGTVD 201
           G VLH    +   +V  +  + TE +  G ITD+LQ   GT+D
Sbjct: 239 GSVLHSYIQSGGKLVERSGSSITEGIGQGRITDNLQPDVGTLD 281
>sp|O18492|CLAVE_STYCL Clavanin E precursor
          Length = 80

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 9/21 (42%), Positives = 17/21 (80%)
 Frame = +1

Query: 46  KEEKIFGIVGEVLHGVGSAAH 108
           +EEK+F ++G+++H VG+  H
Sbjct: 26  EEEKLFKLLGKIIHHVGNFVH 46
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,782,223
Number of Sequences: 369166
Number of extensions: 560565
Number of successful extensions: 1624
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1621
length of database: 68,354,980
effective HSP length: 75
effective length of database: 54,499,855
effective search space used: 1689495505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)