Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_H07
(321 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O44783|SPY_DROME Protein sprouty (Spry) 31 1.0
sp|P38565|MUCB1_XENLA Integumentary mucin B.1 (FIM-B.1) 30 1.7
sp|Q8L778|CESA5_ARATH Cellulose synthase A catalytic subuni... 28 5.0
sp|O81086|TPSD1_ABIGR Alpha-bisabolene synthase ((E)-alpha-... 28 5.0
sp|O08528|HXK2_MOUSE Hexokinase type II (HK II) 28 6.5
sp|P27881|HXK2_RAT Hexokinase type II (HK II) 28 6.5
sp|P52789|HXK2_HUMAN Hexokinase, type II (HK II) (Muscle fo... 28 6.5
sp|O97395|CLAPI_STYCL Clavaspirin precursor 28 6.5
sp|P50867|CYSK_EMENI Cysteine synthase (O-acetylserine sulf... 28 6.5
sp|O18492|CLAVE_STYCL Clavanin E precursor 28 8.5
>sp|O44783|SPY_DROME Protein sprouty (Spry)
Length = 589
Score = 30.8 bits (68), Expect = 1.0
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -3
Query: 244 DNLCSILHRCLLFLDQQFHIYLVNHR*SLQDKQLQ*P*RMQDKLHCEQQNQHH 86
DN + H LL + H++L H+ LQ +Q Q + Q + QQNQ H
Sbjct: 220 DNGQTTTHHLLLLPQRNQHLHLQQHQQHLQQQQQQQQQQQQQQHLQHQQNQQH 272
>sp|P38565|MUCB1_XENLA Integumentary mucin B.1 (FIM-B.1)
Length = 398
Score = 30.0 bits (66), Expect = 1.7
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -2
Query: 191 PHLSCKSSVIAPRQTTSVAVKNARQTTL*AAEPTPCRTSPTIPKIFSSFST 39
P + S AP +TT + +TT+ + E TP + T+P + S ST
Sbjct: 36 PSETTGESTPAPSETTGESTPAPSETTVPSGESTPAPSETTVPSVPSGEST 86
>sp|Q8L778|CESA5_ARATH Cellulose synthase A catalytic subunit 5 [UDP-forming] (AtCesA-5)
Length = 1069
Score = 28.5 bits (62), Expect = 5.0
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +3
Query: 21 SINGYES*KRRKNFR---NSW*GPTWCWFCC 104
++ G+++ K++K R N W P WC FCC
Sbjct: 629 ALYGFDAPKKKKTKRMTCNCW--PKWCLFCC 657
>sp|O81086|TPSD1_ABIGR Alpha-bisabolene synthase ((E)-alpha-bisabolene synthase)
(AgfEabis)
Length = 817
Score = 28.5 bits (62), Expect = 5.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 130 FTATEVVCLGAITDDLQDKCGTVDQ 204
F T+V CL + DD+ D GT+D+
Sbjct: 553 FLFTKVACLQTVLDDMYDTYGTLDE 577
>sp|O08528|HXK2_MOUSE Hexokinase type II (HK II)
Length = 917
Score = 28.1 bits (61), Expect = 6.5
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 40 VEKEEKIFGIVGEVLHGVGSAA--HNVVCLAFF 132
VE KI+ I EV+HG G H V C+A F
Sbjct: 553 VEMHNKIYSIPQEVMHGTGEELFDHIVQCIADF 585
>sp|P27881|HXK2_RAT Hexokinase type II (HK II)
Length = 917
Score = 28.1 bits (61), Expect = 6.5
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 40 VEKEEKIFGIVGEVLHGVGSAA--HNVVCLAFF 132
VE KI+ I EV+HG G H V C+A F
Sbjct: 553 VEMHNKIYSIPQEVMHGTGEELFDHIVQCIADF 585
>sp|P52789|HXK2_HUMAN Hexokinase, type II (HK II) (Muscle form hexokinase)
Length = 917
Score = 28.1 bits (61), Expect = 6.5
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 40 VEKEEKIFGIVGEVLHGVGSAA--HNVVCLAFF 132
VE KI+ I EV+HG G H V C+A F
Sbjct: 553 VEMHNKIYAIPQEVMHGTGDELFDHIVQCIADF 585
>sp|O97395|CLAPI_STYCL Clavaspirin precursor
Length = 80
Score = 28.1 bits (61), Expect = 6.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 49 EEKIFGIVGEVLHGVGSAAHNV 114
EEK +G V+HG+G H++
Sbjct: 27 EEKFLRFIGSVIHGIGHLVHHI 48
>sp|P50867|CYSK_EMENI Cysteine synthase (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) (CSase)
Length = 371
Score = 28.1 bits (61), Expect = 6.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 73 GEVLHGVGSAAHNVVCLAFFTATEVVCLGAITDDLQDKCGTVD 201
G VLH + +V + + TE + G ITD+LQ GT+D
Sbjct: 239 GSVLHSYIQSGGKLVERSGSSITEGIGQGRITDNLQPDVGTLD 281
>sp|O18492|CLAVE_STYCL Clavanin E precursor
Length = 80
Score = 27.7 bits (60), Expect = 8.5
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +1
Query: 46 KEEKIFGIVGEVLHGVGSAAH 108
+EEK+F ++G+++H VG+ H
Sbjct: 26 EEEKLFKLLGKIIHHVGNFVH 46
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,782,223
Number of Sequences: 369166
Number of extensions: 560565
Number of successful extensions: 1624
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1621
length of database: 68,354,980
effective HSP length: 75
effective length of database: 54,499,855
effective search space used: 1689495505
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)