Planaria EST Database


DrC_01182

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01182
         (804 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O94446|MST1_SCHPO  Protein mst1                                 40   0.007
sp|Q96D71|REPS1_HUMAN  RalBP1 associated Eps domain containi...    38   0.028
sp|O54916|REPS1_MOUSE  RalBP1 associated Eps domain containi...    38   0.028
sp|Q80XA6|REPS2_MOUSE  RalBP1 associated Eps domain containi...    38   0.028
sp|Q8NFH8|REPS2_HUMAN  RalBP1 associated Eps domain containi...    37   0.048
sp|O17972|NPHP1_CAEEL  Nephrocystin-1-like protein                 36   0.11 
sp|Q12955|ANK3_HUMAN  Ankyrin-3 (ANK-3) (Ankyrin G)                34   0.53 
sp|O75116|ROCK2_HUMAN  Rho-associated protein kinase 2 (Rho-...    33   0.91 
sp|Q90763|CADH7_CHICK  Cadherin-7 precursor                        33   1.2  
sp|Q62245|SOS1_MOUSE  Son of sevenless protein homolog 1 (SO...    32   1.6  
>sp|O94446|MST1_SCHPO Protein mst1
          Length = 463

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 7/132 (5%)
 Frame = -3

Query: 640 DNETISSFIK---PEGPKKLLIEGESSTAVNNMDSQDSITDTTKLE--TDVVMKTPPVPP 476
           DN  +S  I+   PE PKK   +G+SS     +D + SIT  +K E  T    K  P  P
Sbjct: 70  DNIDLSKGIEYPPPEKPKKAHGKGKSSKRPKAVDRRRSITAPSKTEPSTPSTEKPEPSTP 129

Query: 475 RHRWSHKPIENSNSFSTFEEDAPPNEPLLDKQYLVNKSAFGIDFSQSP--VAIVMSLNSI 302
                H     + S    EED  P    L K+  V +  F     Q+P  +A + ++N I
Sbjct: 130 SGESDHGSNAGNESLPLLEEDHKPES--LSKEQEVERLRFSGSMVQNPHEIARIRNINKI 187

Query: 301 LDIDDRKEAYNY 266
              D   E + +
Sbjct: 188 CIGDHEIEPWYF 199
>sp|Q96D71|REPS1_HUMAN RalBP1 associated Eps domain containing protein 1
           (RalBP1-interacting protein 1)
          Length = 744

 Score = 38.1 bits (87), Expect = 0.028
 Identities = 19/51 (37%), Positives = 30/51 (58%)
 Frame = -3

Query: 283 KEAYNYLISTTKMQCESLTSLNQEMSRNLKQLQQQRISLEIQLEKMMPLNY 131
           K+A    I   K     L  LN E+ + LK + ++RISLE+QLE++ P ++
Sbjct: 693 KKAIQASIRRNKETNTVLARLNSELQQQLKDVLEERISLEVQLEQLRPFSH 743
>sp|O54916|REPS1_MOUSE RalBP1 associated Eps domain containing protein 1
           (RalBP1-interacting protein 1)
          Length = 743

 Score = 38.1 bits (87), Expect = 0.028
 Identities = 19/51 (37%), Positives = 30/51 (58%)
 Frame = -3

Query: 283 KEAYNYLISTTKMQCESLTSLNQEMSRNLKQLQQQRISLEIQLEKMMPLNY 131
           K+A    I   K     L  LN E+ + LK + ++RISLE+QLE++ P ++
Sbjct: 692 KKAIQASIRRNKETNTVLARLNSELQQQLKDVLEERISLEVQLEQLRPFSH 742
>sp|Q80XA6|REPS2_MOUSE RalBP1 associated Eps domain containing protein 2
           (RalBP1-interacting protein 2) (Partner of RalBP1)
          Length = 521

 Score = 38.1 bits (87), Expect = 0.028
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
 Frame = -3

Query: 409 PPNEPLLDKQYLVNKSAFGIDFSQSPVAIVMSLNSILDI----------DDRKEAYNYLI 260
           PP++P+  K    N++      SQ P A V    S   +            +K+A    I
Sbjct: 422 PPSKPIRRKFRPENQTTE----SQEPAAAVGGAVSAAMVKPHPTVQKQSSKQKKAIQTAI 477

Query: 259 STTKMQCESLTSLNQEMSRNLKQLQQQRISLEIQLEKMMPL 137
              K     L  LN E+ + LK++ Q+RI+LE QLE++ P+
Sbjct: 478 RKNKEANAVLARLNSELQQQLKEVHQERIALENQLEQLRPV 518
>sp|Q8NFH8|REPS2_HUMAN RalBP1 associated Eps domain containing protein 2
           (RalBP1-interacting protein 2) (Partner of RalBP1)
          Length = 660

 Score = 37.4 bits (85), Expect = 0.048
 Identities = 19/50 (38%), Positives = 30/50 (60%)
 Frame = -3

Query: 286 RKEAYNYLISTTKMQCESLTSLNQEMSRNLKQLQQQRISLEIQLEKMMPL 137
           +K+A    I   K     L  LN E+ + LK++ Q+RI+LE QLE++ P+
Sbjct: 608 QKKAIQTAIRKNKEANAVLARLNSELQQQLKEVHQERIALENQLEQLRPV 657
>sp|O17972|NPHP1_CAEEL Nephrocystin-1-like protein
          Length = 682

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
 Frame = -3

Query: 661 PFKPALYDNETISSFIKPEGPKKLLIEGESSTAVNNMDSQDSITDTTKLETDVVMKTP-- 488
           P K  L  + ++ S  + E PK   I    ST  N+ +S+DS  D+  +ETDV +  P  
Sbjct: 94  PEKEQLSFSVSVDSQSEEEKPKMAAIGRRKSTMYNDDESEDSDNDSEIIETDVQLDDPLP 153

Query: 487 --PVPPRHR 467
             P PP+ +
Sbjct: 154 SQPQPPQQQ 162
>sp|Q12955|ANK3_HUMAN Ankyrin-3 (ANK-3) (Ankyrin G)
          Length = 4377

 Score = 33.9 bits (76), Expect = 0.53
 Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 3/157 (1%)
 Frame = -3

Query: 601  PKKLLIEGESSTAVNNMDSQDSITDTTKLETDVVMKTPPVPPRHRWSHKPIENSNSFSTF 422
            P +L + G ++  +       S+ DT K+ T+  M T  V  +H+ +     N     + 
Sbjct: 789  PNELTVNGNTALGIARRLGYISVVDTLKIVTEETMTTTTVTEKHKMNVPETMNEVLDMSD 848

Query: 421  EEDAPPNEP--LLDKQYLVNKSAFGIDFSQSPVAIVMSLNSILDI-DDRKEAYNYLISTT 251
            +E    N P  L D +Y+ +    G D         +    + ++ DD   A  Y+  + 
Sbjct: 849  DEVRKANAPEMLSDGEYISDVEE-GEDAMTGDTDKYLGPQDLKELGDDSLPAEGYMGFSL 907

Query: 250  KMQCESLTSLNQEMSRNLKQLQQQRISLEIQLEKMMP 140
              +  SL S + + S  L +    R S+ I+ E ++P
Sbjct: 908  GARSASLRSFSSDRSYTLNRSSYARDSMMIE-ELLVP 943
>sp|O75116|ROCK2_HUMAN Rho-associated protein kinase 2 (Rho-associated, coiled-coil
            containing protein kinase 2) (p164 ROCK-2) (Rho kinase 2)
          Length = 1388

 Score = 33.1 bits (74), Expect = 0.91
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
 Frame = -3

Query: 298  DIDDRKEAYNYLISTTKMQ-------CESLTSLNQEMSRNLKQLQQQRISLEIQLE 152
            ++ D+ EA  Y  +  K Q       CE  T L +E+ +  ++LQ +R SL  QLE
Sbjct: 861  ELQDQLEAEQYFSTLYKTQVRELKEECEEKTKLGKELQQKKQELQDERDSLAAQLE 916
>sp|Q90763|CADH7_CHICK Cadherin-7 precursor
          Length = 785

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 40/180 (22%), Positives = 67/180 (37%), Gaps = 9/180 (5%)
 Frame = -3

Query: 646 LYDNETISSFIKPEGPKKLLIEGESSTAVNNMDSQDSITDTTKL--ETDVVMKTPPVPPR 473
           LY  +  S   K +G  K ++ GE ++++  +D        TK     +    T      
Sbjct: 66  LYVGKLHSDVDKGDGSIKYILSGEGASSIFIIDENTGDIHATKRLDREEQAYYTLRAQAH 125

Query: 472 HRWSHKPIENSNSFSTFEEDAPPNEP-LLDKQYLVNKSAFGIDFSQSPVAIVMSLNSILD 296
            R ++KP+E  + F    +D   NEP  LD  Y             SPV   +   +  D
Sbjct: 126 DRLTNKPVEPESEFVIKIQDINDNEPKFLDGPYTAGVP------EMSPVGTSVVQVTATD 179

Query: 295 IDD------RKEAYNYLISTTKMQCESLTSLNQEMSRNLKQLQQQRISLEIQLEKMMPLN 134
            DD       +  Y+ L        E  T + +    N+ +  + +  L IQ + M+  N
Sbjct: 180 ADDPTYGNSARVVYSILQGQPYFSVEPKTGIIKTALPNMDREAKDQYLLVIQAKDMVGQN 239
>sp|Q62245|SOS1_MOUSE Son of sevenless protein homolog 1 (SOS-1) (mSOS-1)
          Length = 1319

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 34/116 (29%), Positives = 47/116 (40%), Gaps = 18/116 (15%)
 Frame = -3

Query: 688  EGDKISYPVPFKPALYDNETISSFIKPEGPKKLLIEGESSTAVNNMD------------- 548
            E  KISY       + ++ET S+   P  P+  L    +S   +N D             
Sbjct: 1059 EPRKISYS-----RIPESETESTASAPNSPRTPLTPPPASGTSSNTDVCSVFDSDHSASP 1113

Query: 547  --SQDSITDTTKLE--TDVVMKTPPVPPRHRWSHKPIENSNS-FSTFEEDAPPNEP 395
              S+ +   +  L   TD V   PPVPPR R    P E+S S   +   D+PP  P
Sbjct: 1114 FHSRSASVSSISLSKGTDEVPVPPPVPPRRRPESAPAESSPSKIMSKHLDSPPAIP 1169
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,437,486
Number of Sequences: 369166
Number of extensions: 1667388
Number of successful extensions: 4852
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4846
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7618580670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)