Planaria EST Database


DrC_01173

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01173
         (211 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6SA95|FA9_FELCA  Coagulation factor IX precursor (Christ...    30   1.7  
sp|P29187|TXSHK_STOHE  Potassium channel toxin ShK                 30   2.3  
sp|P57620|EX1_BUCAI  Exodeoxyribonuclease I (Exonuclease I) ...    30   2.3  
sp|P19540|FA9_CANFA  Coagulation factor IX precursor (Christ...    29   2.9  
sp|Q19269|NAS14_CAEEL  Zinc metalloproteinase nas-14 precurs...    29   2.9  
sp|P16293|FA9_PIG  Coagulation factor IX (Christmas factor) ...    29   2.9  
sp|Q91ZC6|MRGA6_MOUSE  Mas-related G-protein coupled recepto...    29   3.8  
sp|P00741|FA9_BOVIN  Coagulation factor IX (Christmas factor...    29   3.8  
sp|O96785|HUNB_CLOAL  Hunchback protein                            28   5.0  
sp|P35209|SPT21_YEAST  SPT21 protein                               28   6.5  
>sp|Q6SA95|FA9_FELCA Coagulation factor IX precursor (Christmas factor) [Contains:
           Coagulation factor IXa light chain; Coagulation factor
           IXa heavy chain]
          Length = 466

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
 Frame = +2

Query: 50  KEKINSAKLFCESNY--KHCKK--SCGIFSGHCKKNCK 151
           K+ INS + +C++ +  K+C+   +C I +G CK+ CK
Sbjct: 109 KDDINSYECWCQTGFEGKNCELDVTCNIKNGRCKQFCK 146
>sp|P29187|TXSHK_STOHE Potassium channel toxin ShK
          Length = 35

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 104 KKSCGIFSGHCKKNCKYRLKYCKSTC 181
           K  C  F   CK + KYRL +C+ TC
Sbjct: 9   KSRCTAFQ--CKHSMKYRLSFCRKTC 32
>sp|P57620|EX1_BUCAI Exodeoxyribonuclease I (Exonuclease I) (DNA
           deoxyribophosphodiesterase) (dRPase)
          Length = 413

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = -3

Query: 194 LLNFNKCFYNISIGICNSSCNDQKIYHMISYNACNCFHKIAL--QNLFFPSTSELVYSKN 21
           LL+ N+C     I +      ++  +H  S N      KI L  +N+FF    ++++SKN
Sbjct: 295 LLHLNRCPILAPIQVIRKEDYNRLNFHRFSLNK-----KIELIKKNMFFIQNIKIIFSKN 349

Query: 20  NN 15
           NN
Sbjct: 350 NN 351
>sp|P19540|FA9_CANFA Coagulation factor IX precursor (Christmas factor) [Contains:
           Coagulation factor IXa light chain; Coagulation factor
           IXa heavy chain]
          Length = 452

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
 Frame = +2

Query: 50  KEKINSAKLFCESNY--KHCKK--SCGIFSGHCKKNCK 151
           K+ INS + +C + +  K+C+   +C I +G CK+ CK
Sbjct: 102 KDDINSYECWCRAGFEGKNCELDVTCNIKNGRCKQFCK 139
>sp|Q19269|NAS14_CAEEL Zinc metalloproteinase nas-14 precursor (Nematode astacin 14)
          Length = 503

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +2

Query: 80  CESNYKHCKKSCGIFS--GHCKKNCKYRLKYCKSTC 181
           CE    HC    G++   GHC+ + KY   YC+  C
Sbjct: 380 CEDLNAHC----GMWEQLGHCQHSVKYMAHYCRKAC 411
>sp|P16293|FA9_PIG Coagulation factor IX (Christmas factor) [Contains: Coagulation
           factor IXa light chain; Coagulation factor IXa heavy
           chain]
          Length = 409

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
 Frame = +2

Query: 50  KEKINSAKLFCESNY--KHCK--KSCGIFSGHCKKNCK 151
           K+ INS + +C+  +  K+C+   +C I +G CK+ CK
Sbjct: 64  KDDINSYECWCQVGFEGKNCELDATCNIKNGRCKQFCK 101
>sp|Q91ZC6|MRGA6_MOUSE Mas-related G-protein coupled receptor member A6
          Length = 301

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = -1

Query: 139 LAMTRKYTT*FLTMLVIAFTK*LCRIYFFLL--LQNLYTV 26
           + +TR Y T  LT+LV       C  Y+FLL  ++N++TV
Sbjct: 195 MKLTRLYVTITLTLLVFLLCGLPCGFYWFLLSKIKNVFTV 234
>sp|P00741|FA9_BOVIN Coagulation factor IX (Christmas factor) [Contains: Coagulation
           factor IXa light chain; Coagulation factor IXa heavy
           chain]
          Length = 416

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
 Frame = +2

Query: 50  KEKINSAKLFCESNYK--HCK--KSCGIFSGHCKKNCK 151
           K+ INS + +C++ ++  +C+   +C I +G CK+ CK
Sbjct: 63  KDDINSYECWCQAGFEGTNCELDATCSIKNGRCKQFCK 100
>sp|O96785|HUNB_CLOAL Hunchback protein
          Length = 485

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 17/57 (29%), Positives = 23/57 (40%)
 Frame = +2

Query: 5   RCFDCYFYCIQVLK*KEKINSAKLFCESNYKHCKKSCGIFSGHCKKNCKYRLKYCKS 175
           +C  C + C+     K  +NS          H K    I+   CK +C Y  KYC S
Sbjct: 145 QCKQCNYSCVN----KSMLNS----------HMKSHSNIYQYRCK-DCNYATKYCHS 186
>sp|P35209|SPT21_YEAST SPT21 protein
          Length = 758

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 20/60 (33%), Positives = 27/60 (45%)
 Frame = -3

Query: 188 NFNKCFYNISIGICNSSCNDQKIYHMISYNACNCFHKIALQNLFFPSTSELVYSKNNNQS 9
           NFN  F+        S  N Q +   I+ N  N  + IAL+N      SEL  ++NN  S
Sbjct: 505 NFNCNFFESPTSASASQLNQQNLKPSITLNDPNTCNTIALEN---EDVSELETAQNNKIS 561
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,085,628
Number of Sequences: 369166
Number of extensions: 386201
Number of successful extensions: 1374
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 68,354,980
effective HSP length: 41
effective length of database: 60,780,845
effective search space used: 1701863660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)