Planaria EST Database


DrC_01154

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01154
         (840 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q44643|ACPA_BACAN  Capsule synthesis positive regulator acpA    33   0.75 
sp|Q9ESL4|MLTK_MOUSE  Mitogen-activated protein kinase kinas...    33   0.98 
sp|Q9NYL2|MLTK_HUMAN  Mitogen-activated protein kinase kinas...    33   1.3  
sp|P43243|MATR3_HUMAN  Matrin-3                                    32   2.2  
sp|Q16760|DGKD_HUMAN  Diacylglycerol kinase, delta (Diglycer...    32   2.2  
sp|Q8K310|MATR3_MOUSE  Matrin-3                                    31   3.7  
sp|P08411|POLN_SFV  Nonstructural polyprotein (Polyprotein n...    30   6.4  
sp|P39969|BOI2_YEAST  Protein BOI2 (Protein BEB1)                  30   6.4  
sp|P43244|MATR3_RAT  Matrin-3                                      30   6.4  
sp|Q895N4|Y1238_CLOTE  Hypothetical UPF0348 protein CTC01238       30   8.3  
>sp|Q44643|ACPA_BACAN Capsule synthesis positive regulator acpA
          Length = 483

 Score = 33.5 bits (75), Expect = 0.75
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = +2

Query: 473 QNRNISQSNRIVILSEPSNTEIDKKSSVLKRLGKSLE---KYEKLTNGNADNCDEIE 634
           +  NI++   ++I  E  + E   KS + KR G  L+    + K+ NGN DN D I+
Sbjct: 389 KQHNINRKKVLLITGEGKSWEEYMKSRINKRYGDQLKFVGGHAKILNGNTDNIDNID 445
>sp|Q9ESL4|MLTK_MOUSE Mitogen-activated protein kinase kinase kinase MLT (MLK-like
           mitogen-activated protein triple kinase) (Leucine zipper
           and sterile alpha motif kinase ZAK) (Sterile-alpha motif
           and leucine zipper containing kinase AZK) (Mixed lineage
           kinase-related kinase MRK)
          Length = 802

 Score = 33.1 bits (74), Expect = 0.98
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +2

Query: 35  EDVY-WECFFNNAGISGPASKDYASIFVKNKISKPILVHINDSHLKSMGIEAIGDIIRIL 211
           +DVY W       G S      YAS+F +N I+   L+ + +  LK MGI + G II   
Sbjct: 342 DDVYFWVQQLVRKGESSVEMSGYASLFKENNITGKRLLLLEEEDLKDMGIVSKGHIIHFK 401

Query: 212 KYIK 223
             I+
Sbjct: 402 SAIE 405
>sp|Q9NYL2|MLTK_HUMAN Mitogen-activated protein kinase kinase kinase MLT (MLK-like
           mitogen-activated protein triple kinase) (Leucine zipper
           and sterile alpha motif kinase ZAK) (Sterile-alpha motif
           and leucine zipper containing kinase AZK) (Mixed lineage
           kinase-related kinase MRK) (Cervical cancer suppressor
           gene-4 protein)
          Length = 800

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +2

Query: 35  EDVY-WECFFNNAGISGPASKDYASIFVKNKISKPILVHINDSHLKSMGIEAIGDIIRIL 211
           +DVY W       G S      YAS+F +N I+   L+ + +  LK MGI + G II   
Sbjct: 342 DDVYCWVQQLVRKGDSSAEMSVYASLFKENNITGKRLLLLEEEDLKDMGIVSKGHIIHFK 401

Query: 212 KYIK 223
             I+
Sbjct: 402 SAIE 405
>sp|P43243|MATR3_HUMAN Matrin-3
          Length = 847

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +2

Query: 518 EPSNTEIDKKSSVLKRLGKSLEKYEKLTNGNADNCDEIEKSVPENSIKNTENT 676
           EPS+  + K  S      K L+K +K+     +  D+  ++  EN IKN ENT
Sbjct: 694 EPSDKAVKKDGSASAAAKKKLKKVDKI-----EELDQENEAALENGIKNEENT 741
>sp|Q16760|DGKD_HUMAN Diacylglycerol kinase, delta (Diglyceride kinase) (DGK-delta) (DAG
            kinase delta) (130 kDa diacylglycerol kinase)
          Length = 1214

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +2

Query: 95   DYASIFVKNKISKPILVHINDSHLKSMGIEAIGDIIRILKYIKDFPQT 238
            +Y  IF ++ I    L+H+    LK +G+  +G + RIL  IK+  ++
Sbjct: 1161 EYKDIFTRHDIRGSELLHLERRDLKDLGVTKVGHMKRILCGIKELSRS 1208
>sp|Q8K310|MATR3_MOUSE Matrin-3
          Length = 846

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +2

Query: 518 EPSNTEIDKKSSVLKRLGKSLEKYEKLTNGNADNCDEIEKSVPENSIKNTENT 676
           EPS+  + K  S      K L+K +K+     +  D+  ++  EN IKN ENT
Sbjct: 693 EPSDKAVKKDPSASATSKKKLKKVDKI-----EELDQENEAALENGIKNEENT 740
>sp|P08411|POLN_SFV Nonstructural polyprotein (Polyprotein nsP1234) [Contains:
           Nonstructural protein NSP1; Nonstructural protein NSP2;
           Nonstructural protein NSP3; Nonstructural protein NSP4]
          Length = 2431

 Score = 30.4 bits (67), Expect = 6.4
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = +2

Query: 545 KSSVLKRLGKSLEKYEKLTNGNADNCDEIEKSVPENSIKNTENTN 679
           KS+++K L   + K++ +T+G  +NC EI   V ++  K T   N
Sbjct: 729 KSAIIKSL---VTKHDLVTSGKKENCQEIVNDVKKHRGKGTSREN 770
>sp|P39969|BOI2_YEAST Protein BOI2 (Protein BEB1)
          Length = 1040

 Score = 30.4 bits (67), Expect = 6.4
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +2

Query: 101 ASIFVKNKISKPILVHINDSHLKSMGIEAIGDIIRILKYIK 223
           AS F K+KIS  IL+ +   HLK + I + G    I K I+
Sbjct: 285 ASRFQKHKISGKILLELELVHLKELDINSFGTRFEIFKEIE 325
>sp|P43244|MATR3_RAT Matrin-3
          Length = 845

 Score = 30.4 bits (67), Expect = 6.4
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +2

Query: 518 EPSNTEIDKKSSVLKRLGKSLEKYEKLTNGNADNCDEIEKSVPENSIKNTENT 676
           EPS+  + K +S   +  K L+K +K+     +  D+  ++  EN IKN ENT
Sbjct: 694 EPSDKAVKKDASATSK--KKLKKVDKI-----EELDQENEAALENGIKNEENT 739
>sp|Q895N4|Y1238_CLOTE Hypothetical UPF0348 protein CTC01238
          Length = 403

 Score = 30.0 bits (66), Expect = 8.3
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
 Frame = +2

Query: 605 GNADNCDEIEKSVPE---NSIKNTENTNC 682
           GN +N D + KSVPE   N +KN +N  C
Sbjct: 218 GNNENLDNLVKSVPETVLNMLKNFQNEQC 246
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,033,557
Number of Sequences: 369166
Number of extensions: 1604221
Number of successful extensions: 4465
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4464
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8197207050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)