Planaria EST Database


DrC_01151

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01151
         (917 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P29774|ETS3_DROME  DNA-binding protein D-ETS-3                 201   3e-51
sp|Q01414|ERG_LYTVA  Transcriptional regulator ERG homolog        194   2e-49
sp|P11308|ERG_HUMAN  Transcriptional regulator ERG (Transfor...   193   5e-49
sp|Q90837|ERG_CHICK  Transcriptional regulator Erg                193   5e-49
sp|P81270|ERG_MOUSE  Transcriptional regulator ERG                193   6e-49
sp|P26323|FLI1_MOUSE  Friend leukemia integration 1 transcri...   190   4e-48
sp|Q01543|FLI1_HUMAN  Friend leukemia integration 1 transcri...   190   4e-48
sp|P41157|FLI1_XENLA  Retroviral integration site protein Fl...   188   2e-47
sp|P29776|ETS6_DROME  DNA-binding protein D-ETS-6                 168   2e-41
sp|P15036|ETS2_HUMAN  C-ets-2 protein                             132   1e-30
>sp|P29774|ETS3_DROME DNA-binding protein D-ETS-3
          Length = 490

 Score =  201 bits (510), Expect = 3e-51
 Identities = 118/221 (53%), Positives = 138/221 (62%), Gaps = 8/221 (3%)
 Frame = +3

Query: 123 ACSFGGLSSVIFPD-----SSYYTNKSNWMCKQDVGQNPYPYSPLGSCSPCYSLGSTNKS 287
           A + GG  S ++        S+ + +S       +G    P+S L    P    G T+  
Sbjct: 249 ASASGGGGSALYSSYKSSWGSHSSTQSQGYSSNALGIKHDPHSQLRQPDPYQMFGPTSSR 308

Query: 288 QTNTNQWRPQGSGQIQLWQFLLELLSDSRNTTFITWEGTNGEFKLIDPDEVARRWGERKS 467
             ++      GSGQIQLWQFLLELLSDS N + ITWEGTNGEFKL DPDEVARRWGERKS
Sbjct: 309 LASS------GSGQIQLWQFLLELLSDSNNASCITWEGTNGEFKLTDPDEVARRWGERKS 362

Query: 468 KPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFAGLAQAMQPASPTVSGPGASPTSF 647
           KPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDF GLA A QPA+       + PT  
Sbjct: 363 KPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFQGLAAATQPAA-------SDPT-- 413

Query: 648 EPSIYKYQHDLFNSGVNPFLAPAWQHH---ISAGMSPTNGL 761
               YKYQ DLF   + P+      HH   +S+ MSP +G+
Sbjct: 414 ----YKYQSDLF---MTPY------HHSAKLSSFMSPHHGM 441
>sp|Q01414|ERG_LYTVA Transcriptional regulator ERG homolog
          Length = 173

 Score =  194 bits (494), Expect = 2e-49
 Identities = 95/120 (79%), Positives = 99/120 (82%)
 Frame = +3

Query: 321 SGQIQLWQFLLELLSDSRNTTFITWEGTNGEFKLIDPDEVARRWGERKSKPNMNYDKLSR 500
           SGQIQLWQFLLELLSDS N   ITWEGTNGEFK+ DPDEVARRWGERKSKPNMNYDKLSR
Sbjct: 1   SGQIQLWQFLLELLSDSSNANCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSR 60

Query: 501 ALRYYYDKNIMTKVHGKRYAYKFDFAGLAQAMQPASPTVSGPGASPTSFEPSIYKYQHDL 680
           ALRYYYDKNIMTKVHGKRYAYKFDFAGLAQAMQP               +PS+Y+YQ DL
Sbjct: 61  ALRYYYDKNIMTKVHGKRYAYKFDFAGLAQAMQPVQA------------DPSMYRYQSDL 108
>sp|P11308|ERG_HUMAN Transcriptional regulator ERG (Transforming protein ERG)
          Length = 462

 Score =  193 bits (491), Expect = 5e-49
 Identities = 99/142 (69%), Positives = 106/142 (74%)
 Frame = +3

Query: 255 PCYSLGSTNKSQTNTNQWRPQGSGQIQLWQFLLELLSDSRNTTFITWEGTNGEFKLIDPD 434
           P   LG T+    N       GSGQIQLWQFLLELLSDS N++ ITWEGTNGEFK+ DPD
Sbjct: 275 PYQILGPTSSRLANP------GSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPD 328

Query: 435 EVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFAGLAQAMQPASPT 614
           EVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDF G+AQA+QP  P 
Sbjct: 329 EVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPP- 387

Query: 615 VSGPGASPTSFEPSIYKYQHDL 680
                      E S+YKY  DL
Sbjct: 388 -----------ESSLYKYPSDL 398
>sp|Q90837|ERG_CHICK Transcriptional regulator Erg
          Length = 478

 Score =  193 bits (491), Expect = 5e-49
 Identities = 111/208 (53%), Positives = 123/208 (59%), Gaps = 1/208 (0%)
 Frame = +3

Query: 60  PSKSIYYYQAMHSMKQEDY-YRACSFGGLSSVIFPDSSYYTNKSNWMCKQDVGQNPYPYS 236
           P+ S+Y         + D  Y        +S   P  S  T  S+    +   Q P    
Sbjct: 232 PNTSVYPEATQRITTRPDLPYEQARRSAWTSHSHPTQSKATQPSSSTVPKTEDQRP---- 287

Query: 237 PLGSCSPCYSLGSTNKSQTNTNQWRPQGSGQIQLWQFLLELLSDSRNTTFITWEGTNGEF 416
                 P   LG T+    N       GSGQIQLWQFLLELLSDS N+  ITWEGTNGEF
Sbjct: 288 ---QLDPYQILGPTSSRLANP------GSGQIQLWQFLLELLSDSSNSNCITWEGTNGEF 338

Query: 417 KLIDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFAGLAQAM 596
           K+ DPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDF G+AQA+
Sbjct: 339 KMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQAL 398

Query: 597 QPASPTVSGPGASPTSFEPSIYKYQHDL 680
           QP  P            E S+YKY  DL
Sbjct: 399 QPHPP------------ESSMYKYPSDL 414
>sp|P81270|ERG_MOUSE Transcriptional regulator ERG
          Length = 486

 Score =  193 bits (490), Expect = 6e-49
 Identities = 99/142 (69%), Positives = 105/142 (73%)
 Frame = +3

Query: 255 PCYSLGSTNKSQTNTNQWRPQGSGQIQLWQFLLELLSDSRNTTFITWEGTNGEFKLIDPD 434
           P   LG T+    N       GSGQIQLWQFLLELLSDS N+  ITWEGTNGEFK+ DPD
Sbjct: 299 PYQILGPTSSRLANP------GSGQIQLWQFLLELLSDSSNSNCITWEGTNGEFKMTDPD 352

Query: 435 EVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFAGLAQAMQPASPT 614
           EVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDF G+AQA+QP  P 
Sbjct: 353 EVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPP- 411

Query: 615 VSGPGASPTSFEPSIYKYQHDL 680
                      E S+YKY  DL
Sbjct: 412 -----------ESSLYKYPSDL 422
>sp|P26323|FLI1_MOUSE Friend leukemia integration 1 transcription factor (Retroviral
           integration site protein Fli-1)
          Length = 452

 Score =  190 bits (483), Expect = 4e-48
 Identities = 99/142 (69%), Positives = 106/142 (74%)
 Frame = +3

Query: 255 PCYSLGSTNKSQTNTNQWRPQGSGQIQLWQFLLELLSDSRNTTFITWEGTNGEFKLIDPD 434
           P   LG T+    N       GSGQIQLWQFLLELLSDS N + ITWEGTNGEFK+ DPD
Sbjct: 262 PYQILGPTSSRLANP------GSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPD 315

Query: 435 EVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFAGLAQAMQPASPT 614
           EVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDF G+AQA+QP  PT
Sbjct: 316 EVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQP-HPT 374

Query: 615 VSGPGASPTSFEPSIYKYQHDL 680
                      E S+YKY  D+
Sbjct: 375 -----------ETSMYKYPSDI 385
>sp|Q01543|FLI1_HUMAN Friend leukemia integration 1 transcription factor (Fli-1
           proto-oncogene) (ERGB transcription factor)
          Length = 452

 Score =  190 bits (483), Expect = 4e-48
 Identities = 99/141 (70%), Positives = 108/141 (76%), Gaps = 2/141 (1%)
 Frame = +3

Query: 255 PCYSLGSTNKSQTNTNQWRPQGSGQIQLWQFLLELLSDSRNTTFITWEGTNGEFKLIDPD 434
           P   LG T+    N       GSGQIQLWQFLLELLSDS N + ITWEGTNGEFK+ DPD
Sbjct: 262 PYQILGPTSSRLANP------GSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPD 315

Query: 435 EVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFAGLAQAMQPASPT 614
           EVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDF G+AQA+QP  PT
Sbjct: 316 EVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQP-HPT 374

Query: 615 VSGPGASPT--SFEPSIYKYQ 671
            S     P+  S+ PS + +Q
Sbjct: 375 ESSMYKYPSDISYMPSYHAHQ 395
>sp|P41157|FLI1_XENLA Retroviral integration site protein Fli-1 homolog
          Length = 453

 Score =  188 bits (477), Expect = 2e-47
 Identities = 101/167 (60%), Positives = 113/167 (67%), Gaps = 2/167 (1%)
 Frame = +3

Query: 255 PCYSLGSTNKSQTNTNQWRPQGSGQIQLWQFLLELLSDSRNTTFITWEGTNGEFKLIDPD 434
           P   LG T+    N       GSGQIQLWQFLLELLSDS N + ITWEGTNGEFK+ DPD
Sbjct: 263 PYQILGPTSSRLANP------GSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPD 316

Query: 435 EVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFAGLAQAMQPASPT 614
           EVARRWGERKSKPNMNYDKLSRALRYYYDK+IMTKVHGKRYAYKFDF G+AQA+QP  PT
Sbjct: 317 EVARRWGERKSKPNMNYDKLSRALRYYYDKSIMTKVHGKRYAYKFDFHGIAQALQP-HPT 375

Query: 615 VSGPGASPTSFE--PSIYKYQHDLFNSGVNPFLAPAWQHHISAGMSP 749
            +     P+ F   PS + +Q  +     +P   P          SP
Sbjct: 376 DTSMYKYPSEFSYMPSYHSHQQKVNFVPSHPSSMPVTSSGFFGATSP 422
>sp|P29776|ETS6_DROME DNA-binding protein D-ETS-6
          Length = 475

 Score =  168 bits (426), Expect = 2e-41
 Identities = 81/96 (84%), Positives = 86/96 (89%), Gaps = 1/96 (1%)
 Frame = +3

Query: 315 QGSG-QIQLWQFLLELLSDSRNTTFITWEGTNGEFKLIDPDEVARRWGERKSKPNMNYDK 491
           QGSG QIQLWQFLLELL+DS N   I+WEG +GEF+LIDPDEVARRWGERK+KPNMNYDK
Sbjct: 249 QGSGGQIQLWQFLLELLADSSNANAISWEGQSGEFRLIDPDEVARRWGERKAKPNMNYDK 308

Query: 492 LSRALRYYYDKNIMTKVHGKRYAYKFDFAGLAQAMQ 599
           LSRALRYYYDKNIMTKVHGKRYAYKFDF GL  A Q
Sbjct: 309 LSRALRYYYDKNIMTKVHGKRYAYKFDFHGLMAACQ 344
>sp|P15036|ETS2_HUMAN C-ets-2 protein
          Length = 469

 Score =  132 bits (333), Expect = 1e-30
 Identities = 61/84 (72%), Positives = 68/84 (80%)
 Frame = +3

Query: 318 GSGQIQLWQFLLELLSDSRNTTFITWEGTNGEFKLIDPDEVARRWGERKSKPNMNYDKLS 497
           GSG IQLWQFLLELLSD    +FI+W G   EFKL DPDEVARRWG+RK+KP MNY+KLS
Sbjct: 359 GSGPIQLWQFLLELLSDKSCQSFISWTGDGWEFKLADPDEVARRWGKRKNKPKMNYEKLS 418

Query: 498 RALRYYYDKNIMTKVHGKRYAYKF 569
           R LRYYYDKNI+ K  GKRY Y+F
Sbjct: 419 RGLRYYYDKNIIHKTSGKRYVYRF 442
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,942,120
Number of Sequences: 369166
Number of extensions: 2301130
Number of successful extensions: 6391
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6361
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9366655350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)