DrC_01141
- Cluster detail
- GO Category :
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_01141 (905 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P82013|VDAC2_MELGA Voltage-dependent anion-selective cha... 226 5e-59 sp|P81004|VDAC2_XENLA Voltage-dependent anion-selective cha... 225 2e-58 sp|Q9Z2L0|VDAC1_RAT Voltage-dependent anion-selective chann... 223 6e-58 sp|Q60932|VDAC1_MOUSE Voltage-dependent anion-selective cha... 223 6e-58 sp|P21796|VDAC1_HUMAN Voltage-dependent anion-selective cha... 221 2e-57 sp|Q9TT15|VDAC1_RABIT Voltage-dependent anion-selective cha... 220 5e-57 sp|Q60930|VDAC2_MOUSE Voltage-dependent anion-selective cha... 218 2e-56 sp|P81155|VDAC2_RAT Voltage-dependent anion-selective chann... 216 7e-56 sp|P68002|VDAC2_BOVIN Voltage-dependent anion-selective cha... 216 9e-56 sp|P45879|VDAC1_BOVIN Voltage-dependent anion-selective cha... 216 9e-56
>sp|P82013|VDAC2_MELGA Voltage-dependent anion-selective channel protein 2 (VDAC-2) (Outer mitochondrial membrane protein porin 2) Length = 282 Score = 226 bits (577), Expect = 5e-59 Identities = 111/280 (39%), Positives = 173/280 (61%), Gaps = 1/280 (0%) Frame = +1 Query: 25 IPPPFCDLGKATRDLFNKNFHFGVLYVDYLSKSAQGIELTIKGDNNIKAGKLNGSLEWKY 204 IPP + DLGK+ RD+FNK + FG++ +D +KSA G+E T G +N GK+NGSLE KY Sbjct: 2 IPPSYADLGKSARDIFNKGYGFGLVKLDVKTKSASGVEFTTSGSSNTDTGKVNGSLETKY 61 Query: 205 KF-ENGLKNTVKWDTKNDLNVNLSIEDAIKSGSKFSSDFNFNPDSGSKKLKMQTSYKRNY 381 K+ E GL T KW+T N L ++IED I G K + D F+P++G K K++++YKR Sbjct: 62 KWAEYGLTFTEKWNTDNTLGTEIAIEDQIAKGLKLTFDTTFSPNTGKKSGKIKSAYKREC 121 Query: 382 LNFGMDMNFTNIKPILVPSLIIGCTETKGYIAGTEITYDTNRMQLTQHKFSFGYHKPDLS 561 LN G D++F P + S + G +G++AG ++T+D+ + +LT++ FS GY D Sbjct: 122 LNLGCDVDFDFAGPAIHGSAVFGY---EGWLAGYQMTFDSAKSKLTRNNFSVGYKTGDFQ 178 Query: 562 LIGTIINKNDIEALIFQKINPSVDIGVQIKWNWNSRNTEFGVVGKYAFDNDSFFKGKIDN 741 L + + ++ I+QK++ +++ V + W S +T FG+ KY D+ + K++N Sbjct: 179 LHTNVNDGSEFGGSIYQKVSDNLETAVNLAWTAGSNSTRFGIAAKYKLDSTASISAKVNN 238 Query: 742 KSIIGLAYGFRARDNVNITLNAEIDGKDLEKGGHRFGLGL 861 S++G+ Y R V +TL+A IDGK + GGH+ GLGL Sbjct: 239 SSLVGVGYTQTLRPGVKLTLSALIDGKSINAGGHKLGLGL 278
>sp|P81004|VDAC2_XENLA Voltage-dependent anion-selective channel protein 2 (Outer mitochondrial membrane protein porin) Length = 282 Score = 225 bits (573), Expect = 2e-58 Identities = 106/280 (37%), Positives = 175/280 (62%), Gaps = 1/280 (0%) Frame = +1 Query: 25 IPPPFCDLGKATRDLFNKNFHFGVLYVDYLSKSAQGIELTIKGDNNIKAGKLNGSLEWKY 204 +PP + DLGK+ RD+FNK + FG++ +D +KSA G+E T G +N +GK+NGSLE KY Sbjct: 2 VPPSYADLGKSARDIFNKGYGFGLVKLDVKTKSATGVEFTTSGTSNTDSGKVNGSLETKY 61 Query: 205 KF-ENGLKNTVKWDTKNDLNVNLSIEDAIKSGSKFSSDFNFNPDSGSKKLKMQTSYKRNY 381 K+ E GL T KW+T N L ++IED I G K + D F+P++G K K++ +YK+ Y Sbjct: 62 KWGEYGLTFTEKWNTDNTLGTEIAIEDQIAKGLKLTFDTTFSPNTGKKSGKVKAAYKQEY 121 Query: 382 LNFGMDMNFTNIKPILVPSLIIGCTETKGYIAGTEITYDTNRMQLTQHKFSFGYHKPDLS 561 +N G D++F P + S ++G +G++AG ++T+D+ + +LT++ F+ GY D Sbjct: 122 VNLGCDVDFDFAGPAIHGSAVVGY---EGWLAGYQMTFDSAKSKLTKNNFAVGYKTGDFQ 178 Query: 562 LIGTIINKNDIEALIFQKINPSVDIGVQIKWNWNSRNTEFGVVGKYAFDNDSFFKGKIDN 741 L + + ++ I+QK++ ++ V + W + +T FG+ KY D+ + K++N Sbjct: 179 LHTNVNDGSEFAGSIYQKVSDKMETAVNLAWTSGNNSTRFGIAAKYQLDSHAAISAKVNN 238 Query: 742 KSIIGLAYGFRARDNVNITLNAEIDGKDLEKGGHRFGLGL 861 S++G+ Y R V +TL+A +DGK++ GGH+ GLGL Sbjct: 239 SSLVGVGYTQTLRPGVKLTLSALVDGKNINAGGHKLGLGL 278
>sp|Q9Z2L0|VDAC1_RAT Voltage-dependent anion-selective channel protein 1 (VDAC-1) (rVDAC1) (Outer mitochondrial membrane protein porin 1) Length = 283 Score = 223 bits (568), Expect = 6e-58 Identities = 104/284 (36%), Positives = 174/284 (61%), Gaps = 1/284 (0%) Frame = +1 Query: 19 MMIPPPFCDLGKATRDLFNKNFHFGVLYVDYLSKSAQGIELTIKGDNNIKAGKLNGSLEW 198 M +PP + DLGK+ RD+F K + FG++ +D +KS G+E T G N + K+NGSLE Sbjct: 1 MAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVNGSLET 60 Query: 199 KYKF-ENGLKNTVKWDTKNDLNVNLSIEDAIKSGSKFSSDFNFNPDSGSKKLKMQTSYKR 375 KY++ E GL T KW+T N L +++ED + G K + D +F+P++G K K++T YKR Sbjct: 61 KYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKR 120 Query: 376 NYLNFGMDMNFTNIKPILVPSLIIGCTETKGYIAGTEITYDTNRMQLTQHKFSFGYHKPD 555 ++N G D++F P + +L++G +G++AG ++ ++T++ ++TQ F+ GY + Sbjct: 121 EHINLGCDVDFDIAGPSIRGALVLGY---EGWLAGYQMNFETSKSRVTQSNFAVGYKTDE 177 Query: 556 LSLIGTIINKNDIEALIFQKINPSVDIGVQIKWNWNSRNTEFGVVGKYAFDNDSFFKGKI 735 L + + + I+QK+N ++ V + W + NT FG+ KY D D+ F K+ Sbjct: 178 FQLHTNVNDGTEFGGSIYQKVNKKLETAVNLAWTAGNSNTRFGIAAKYQVDPDACFSAKV 237 Query: 736 DNKSIIGLAYGFRARDNVNITLNAEIDGKDLEKGGHRFGLGLSY 867 +N S+IGL Y + + +TL+A +DGK++ GGH+ GLGL + Sbjct: 238 NNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHKLGLGLEF 281
>sp|Q60932|VDAC1_MOUSE Voltage-dependent anion-selective channel protein 1 (VDAC-1) (mVDAC1) (mVDAC5) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin) Length = 296 Score = 223 bits (568), Expect = 6e-58 Identities = 104/284 (36%), Positives = 174/284 (61%), Gaps = 1/284 (0%) Frame = +1 Query: 19 MMIPPPFCDLGKATRDLFNKNFHFGVLYVDYLSKSAQGIELTIKGDNNIKAGKLNGSLEW 198 M +PP + DLGK+ RD+F K + FG++ +D +KS G+E T G N + K+NGSLE Sbjct: 14 MAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVNGSLET 73 Query: 199 KYKF-ENGLKNTVKWDTKNDLNVNLSIEDAIKSGSKFSSDFNFNPDSGSKKLKMQTSYKR 375 KY++ E GL T KW+T N L +++ED + G K + D +F+P++G K K++T YKR Sbjct: 74 KYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKR 133 Query: 376 NYLNFGMDMNFTNIKPILVPSLIIGCTETKGYIAGTEITYDTNRMQLTQHKFSFGYHKPD 555 ++N G D++F P + +L++G +G++AG ++ ++T++ ++TQ F+ GY + Sbjct: 134 EHINLGCDVDFDIAGPSIRGALVLGY---EGWLAGYQMNFETSKSRVTQSNFAVGYKTDE 190 Query: 556 LSLIGTIINKNDIEALIFQKINPSVDIGVQIKWNWNSRNTEFGVVGKYAFDNDSFFKGKI 735 L + + + I+QK+N ++ V + W + NT FG+ KY D D+ F K+ Sbjct: 191 FQLHTNVNDGTEFGGSIYQKVNKKLETAVNLAWTAGNSNTRFGIAAKYQVDPDACFSAKV 250 Query: 736 DNKSIIGLAYGFRARDNVNITLNAEIDGKDLEKGGHRFGLGLSY 867 +N S+IGL Y + + +TL+A +DGK++ GGH+ GLGL + Sbjct: 251 NNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHKLGLGLEF 294
>sp|P21796|VDAC1_HUMAN Voltage-dependent anion-selective channel protein 1 (VDAC-1) (hVDAC1) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin) (Porin 31HL) (Porin 31HM) Length = 283 Score = 221 bits (564), Expect = 2e-57 Identities = 104/284 (36%), Positives = 172/284 (60%), Gaps = 1/284 (0%) Frame = +1 Query: 19 MMIPPPFCDLGKATRDLFNKNFHFGVLYVDYLSKSAQGIELTIKGDNNIKAGKLNGSLEW 198 M +PP + DLGK+ RD+F K + FG++ +D +KS G+E T G N + K+ GSLE Sbjct: 1 MAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLET 60 Query: 199 KYKF-ENGLKNTVKWDTKNDLNVNLSIEDAIKSGSKFSSDFNFNPDSGSKKLKMQTSYKR 375 KY++ E GL T KW+T N L +++ED + G K + D +F+P++G K K++T YKR Sbjct: 61 KYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKR 120 Query: 376 NYLNFGMDMNFTNIKPILVPSLIIGCTETKGYIAGTEITYDTNRMQLTQHKFSFGYHKPD 555 ++N G DM+F P + +L++G +G++AG ++ ++T + ++TQ F+ GY + Sbjct: 121 EHINLGCDMDFDIAGPSIRGALVLGY---EGWLAGYQMNFETAKSRVTQSNFAVGYKTDE 177 Query: 556 LSLIGTIINKNDIEALIFQKINPSVDIGVQIKWNWNSRNTEFGVVGKYAFDNDSFFKGKI 735 L + + + I+QK+N ++ V + W + NT FG+ KY D D+ F K+ Sbjct: 178 FQLHTNVNDGTEFGGSIYQKVNKKLETAVNLAWTAGNSNTRFGIAAKYQIDPDACFSAKV 237 Query: 736 DNKSIIGLAYGFRARDNVNITLNAEIDGKDLEKGGHRFGLGLSY 867 +N S+IGL Y + + +TL+A +DGK++ GGH+ GLGL + Sbjct: 238 NNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHKLGLGLEF 281
>sp|Q9TT15|VDAC1_RABIT Voltage-dependent anion-selective channel protein 1 (VDAC-1) (Outer mitochondrial membrane protein porin 1) Length = 283 Score = 220 bits (560), Expect = 5e-57 Identities = 103/284 (36%), Positives = 172/284 (60%), Gaps = 1/284 (0%) Frame = +1 Query: 19 MMIPPPFCDLGKATRDLFNKNFHFGVLYVDYLSKSAQGIELTIKGDNNIKAGKLNGSLEW 198 M +PP + DLGK+ RD+F K + FG++ +D +KS G+E T G N + K+ GSLE Sbjct: 1 MAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLET 60 Query: 199 KYKF-ENGLKNTVKWDTKNDLNVNLSIEDAIKSGSKFSSDFNFNPDSGSKKLKMQTSYKR 375 KY++ E GL T KW+T N L +++ED + G K + D +F+P++G K K++T YKR Sbjct: 61 KYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKR 120 Query: 376 NYLNFGMDMNFTNIKPILVPSLIIGCTETKGYIAGTEITYDTNRMQLTQHKFSFGYHKPD 555 ++N G D++F P + +L++G +G++AG ++ ++T + ++TQ F+ GY + Sbjct: 121 EHINLGCDVDFDIAGPSIRGALVLGY---EGWLAGYQMNFETAKSRVTQSNFAVGYKTDE 177 Query: 556 LSLIGTIINKNDIEALIFQKINPSVDIGVQIKWNWNSRNTEFGVVGKYAFDNDSFFKGKI 735 L + + + I+QK+N ++ V + W + NT FG+ KY D D+ F K+ Sbjct: 178 FQLHTNVNDGTEFGGSIYQKVNKKLETAVNLAWTAGNSNTRFGIAAKYQIDPDACFSAKV 237 Query: 736 DNKSIIGLAYGFRARDNVNITLNAEIDGKDLEKGGHRFGLGLSY 867 +N S+IGL Y + + +TL+A +DGK++ GGH+ GLGL + Sbjct: 238 NNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHKLGLGLEF 281
>sp|Q60930|VDAC2_MOUSE Voltage-dependent anion-selective channel protein 2 (VDAC-2) (mVDAC2) (mVDAC6) (Outer mitochondrial membrane protein porin 2) Length = 295 Score = 218 bits (554), Expect = 2e-56 Identities = 109/282 (38%), Positives = 165/282 (58%), Gaps = 1/282 (0%) Frame = +1 Query: 19 MMIPPPFCDLGKATRDLFNKNFHFGVLYVDYLSKSAQGIELTIKGDNNIKAGKLNGSLEW 198 M IPPP+ DLGKA RD+FNK F FG++ +D +KS G+E + G +N GK++G+LE Sbjct: 13 MCIPPPYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKVSGTLET 72 Query: 199 KYKF-ENGLKNTVKWDTKNDLNVNLSIEDAIKSGSKFSSDFNFNPDSGSKKLKMQTSYKR 375 KYK+ E GL T KW+T N L ++IED I G K + D F+P++G K K++++YKR Sbjct: 73 KYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSAYKR 132 Query: 376 NYLNFGMDMNFTNIKPILVPSLIIGCTETKGYIAGTEITYDTNRMQLTQHKFSFGYHKPD 555 +N G D++F P + S + G +G++AG ++T+D+ + +LT+ F+ GY D Sbjct: 133 ECINLGCDVDFDFAGPAIHGSAVFGY---EGWLAGYQMTFDSAKSKLTRSNFAVGYRTGD 189 Query: 556 LSLIGTIINKNDIEALIFQKINPSVDIGVQIKWNWNSRNTEFGVVGKYAFDNDSFFKGKI 735 L + N + I+QK+ D V + W + T FG+ KY D + K+ Sbjct: 190 FQLHTNVNNGTEFGGSIYQKVCEDFDTSVNLAWTSGTNCTRFGIAAKYQLDPTASISAKV 249 Query: 736 DNKSIIGLAYGFRARDNVNITLNAEIDGKDLEKGGHRFGLGL 861 +N S+IG+ Y R V +TL+A +DGK GGH+ GL L Sbjct: 250 NNSSLIGVGYTQTLRPGVKLTLSALVDGKSFNAGGHKLGLAL 291
>sp|P81155|VDAC2_RAT Voltage-dependent anion-selective channel protein 2 (VDAC-2) (Outer mitochondrial membrane protein porin 2) (B36-VDAC) Length = 295 Score = 216 bits (550), Expect = 7e-56 Identities = 108/280 (38%), Positives = 164/280 (58%), Gaps = 1/280 (0%) Frame = +1 Query: 25 IPPPFCDLGKATRDLFNKNFHFGVLYVDYLSKSAQGIELTIKGDNNIKAGKLNGSLEWKY 204 IPPP+ DLGKA RD+FNK F FG++ +D +KS G+E + G +N GK++G+LE KY Sbjct: 15 IPPPYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKVSGTLETKY 74 Query: 205 KF-ENGLKNTVKWDTKNDLNVNLSIEDAIKSGSKFSSDFNFNPDSGSKKLKMQTSYKRNY 381 K+ E GL T KW+T N L ++IED I G K + D F+P++G K K++++YKR Sbjct: 75 KWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSAYKREC 134 Query: 382 LNFGMDMNFTNIKPILVPSLIIGCTETKGYIAGTEITYDTNRMQLTQHKFSFGYHKPDLS 561 +N G D++F P + S + G +G++AG ++T+D+ + +LT+ F+ GY D Sbjct: 135 INLGCDVDFDFAGPAIHGSAVFGY---EGWLAGYQMTFDSAKSKLTRSNFAVGYRTGDFQ 191 Query: 562 LIGTIINKNDIEALIFQKINPSVDIGVQIKWNWNSRNTEFGVVGKYAFDNDSFFKGKIDN 741 L + N + I+QK+ D V + W + T FG+ KY D + K++N Sbjct: 192 LHTNVNNGTEFGGSIYQKVCEDFDTSVNLAWTSGTNCTRFGIAAKYQLDPTASISAKVNN 251 Query: 742 KSIIGLAYGFRARDNVNITLNAEIDGKDLEKGGHRFGLGL 861 S+IG+ Y R V +TL+A +DGK GGH+ GL L Sbjct: 252 SSLIGVGYTQTLRPGVKLTLSALVDGKSFNAGGHKLGLAL 291
>sp|P68002|VDAC2_BOVIN Voltage-dependent anion-selective channel protein 2 (Outer mitochondrial membrane protein porin 2) sp|P68003|VDAC2_RABIT Voltage-dependent anion-selective channel protein 2 (Outer mitochondrial membrane protein porin 2) Length = 294 Score = 216 bits (549), Expect = 9e-56 Identities = 108/282 (38%), Positives = 166/282 (58%), Gaps = 1/282 (0%) Frame = +1 Query: 19 MMIPPPFCDLGKATRDLFNKNFHFGVLYVDYLSKSAQGIELTIKGDNNIKAGKLNGSLEW 198 M IPP + DLGKA RD+FNK F FG++ +D +KS G+E + G +N GK+ G+LE Sbjct: 12 MCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKVTGTLET 71 Query: 199 KYKF-ENGLKNTVKWDTKNDLNVNLSIEDAIKSGSKFSSDFNFNPDSGSKKLKMQTSYKR 375 KYK+ E GL T KW+T N L ++IED I G K + D F+P++G K K+++SYKR Sbjct: 72 KYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSSYKR 131 Query: 376 NYLNFGMDMNFTNIKPILVPSLIIGCTETKGYIAGTEITYDTNRMQLTQHKFSFGYHKPD 555 +N G D++F P + S + G +G++AG ++T+D+ + +LT++ F+ GY D Sbjct: 132 ECINLGCDVDFDFAGPAIHGSAVFGY---EGWLAGYQMTFDSAKSKLTRNNFAVGYRTGD 188 Query: 556 LSLIGTIINKNDIEALIFQKINPSVDIGVQIKWNWNSRNTEFGVVGKYAFDNDSFFKGKI 735 L + + + I+QK+ +D V + W + T FG+ KY D + K+ Sbjct: 189 FQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPTASISAKV 248 Query: 736 DNKSIIGLAYGFRARDNVNITLNAEIDGKDLEKGGHRFGLGL 861 +N S+IG+ Y R V +TL+A +DGK + GGH+ GL L Sbjct: 249 NNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKLGLAL 290
>sp|P45879|VDAC1_BOVIN Voltage-dependent anion-selective channel protein 1 (VDAC-1) (Plasmalemmal porin) (Brain-derived voltage-dependent anion channel 1) (BR1-VDAC) Length = 283 Score = 216 bits (549), Expect = 9e-56 Identities = 102/284 (35%), Positives = 171/284 (60%), Gaps = 1/284 (0%) Frame = +1 Query: 19 MMIPPPFCDLGKATRDLFNKNFHFGVLYVDYLSKSAQGIELTIKGDNNIKAGKLNGSLEW 198 M + P+ DLGK+ RD+F K + FG++ +D +KS G+E T G N + K+ GSLE Sbjct: 1 MAVVRPYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLET 60 Query: 199 KYKF-ENGLKNTVKWDTKNDLNVNLSIEDAIKSGSKFSSDFNFNPDSGSKKLKMQTSYKR 375 KY++ E GL T KW+T N L +++ED + G K + D +F+P++G K K++T YKR Sbjct: 61 KYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGRKNAKIKTGYKR 120 Query: 376 NYLNFGMDMNFTNIKPILVPSLIIGCTETKGYIAGTEITYDTNRMQLTQHKFSFGYHKPD 555 ++N G D++F P + +L++G +G++AG ++ ++T + ++TQ F+ GY + Sbjct: 121 EHINLGCDVDFDIAGPSIRGALVLGY---EGWLAGYQMNFETAKSRVTQSNFAVGYKTDE 177 Query: 556 LSLIGTIINKNDIEALIFQKINPSVDIGVQIKWNWNSRNTEFGVVGKYAFDNDSFFKGKI 735 L + + + I+QK+N ++ V + W + NT FG+ KY D D+ F K+ Sbjct: 178 FQLHTNVNDGTEFGGSIYQKVNKKLETAVNLAWTAGNSNTRFGIAAKYQIDPDACFSAKV 237 Query: 736 DNKSIIGLAYGFRARDNVNITLNAEIDGKDLEKGGHRFGLGLSY 867 +N S+IGL Y + + +TL+A +DGK++ GGH+ GLGL + Sbjct: 238 NNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHKLGLGLEF 281
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,820,655
Number of Sequences: 369166
Number of extensions: 2374090
Number of successful extensions: 6487
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6425
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9174518830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
