Planaria EST Database

DrC_01047

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01047
         (679 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P49947|FRIM_SALSA  Ferritin, middle subunit (Ferritin M)        65   1e-10
sp|P17663|FRIH1_XENLA  Ferritin heavy chain 1                      65   2e-10
sp|P49948|FRIH2_XENLA  Ferritin heavy chain 2 (XL2-17)             64   3e-10
sp|P49945|FRIL2_MOUSE  Ferritin light chain 2 (Ferritin L su...    64   5e-10
sp|P29391|FRIL1_MOUSE  Ferritin light chain 1 (Ferritin L su...    64   5e-10
sp|P42577|FRIS_LYMST  Soma ferritin                                63   8e-10
sp|P07229|FRI1_RANCA  Ferritin, higher subunit (Ferritin H)        63   8e-10
sp|P07798|FRI2_RANCA  Ferritin, middle subunit (Ferritin M) ...    63   8e-10
sp|P02793|FRIL1_RAT  Ferritin light chain 1 (Ferritin L subu...    62   2e-09
sp|P08267|FRIH_CHICK  Ferritin heavy chain (Ferritin H subunit)    61   2e-09

>sp|P49947|FRIM_SALSA Ferritin, middle subunit (Ferritin M)
          Length = 176

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 40/145 (27%), Positives = 72/145 (49%)
 Frame = +1

Query: 19  EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 198
           + E  ++++IN        Y  +      +D+ L  F   F+   + E  +A++L+ FQ 
Sbjct: 12  DCERAINRMINMEMFASYTYTSMAFYFSRDDVALPGFAHFFKENSEEEREHADKLLSFQN 71

Query: 199 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 378
            RG +I   D K  E  +    +E  Q  L +EK+V+Q  L + K+A +KVD  L  FL+
Sbjct: 72  KRGGRILLQDIKKPERDEWGNGLEAMQCALQLEKNVNQALLDLHKIASDKVDPHLCDFLE 131

Query: 379 DRVILRQVKVIRKRANQLRDLKRSE 453
              +  QV+ I+K  + + +L + +
Sbjct: 132 THYLNEQVEAIKKLGDHITNLTKMD 156

>sp|P17663|FRIH1_XENLA Ferritin heavy chain 1
          Length = 176

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 38/143 (26%), Positives = 72/143 (50%)
 Frame = +1

Query: 19  EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 198
           + E  +++++N   +    Y  +      +D+ L    + F+     E  +AE+ +++Q 
Sbjct: 12  DCEAAINRMVNLEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQN 71

Query: 199 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 378
            RG ++   D K  E  + +  +E  Q  L +EK V+Q  L + KLA +KVD  L  FL+
Sbjct: 72  KRGGRVVLQDIKKPERDEWSNTLEAMQAALQLEKTVNQALLDLHKLASDKVDPQLCDFLE 131

Query: 379 DRVILRQVKVIRKRANQLRDLKR 447
              +  QVK +++  + + +LKR
Sbjct: 132 SEYLEEQVKAMKELGDYITNLKR 154

>sp|P49948|FRIH2_XENLA Ferritin heavy chain 2 (XL2-17)
          Length = 176

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 38/143 (26%), Positives = 71/143 (49%)
 Frame = +1

Query: 19  EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 198
           + E  +++++N   +    Y  +      +D+ L    + F+     E  +AE+ +++Q 
Sbjct: 12  DCEAAINRMVNMEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQN 71

Query: 199 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 378
            RG ++   D K  E  +    +E  Q  L +EK V+Q  L + KLA +KVD  L  FL+
Sbjct: 72  KRGGRVVLQDIKKPERDEWGNTLEATQAALQLEKTVNQALLDLHKLASDKVDAHLCDFLE 131

Query: 379 DRVILRQVKVIRKRANQLRDLKR 447
              +  QVK +++  + + +LKR
Sbjct: 132 SEYLEEQVKAMKQLGDYITNLKR 154

>sp|P49945|FRIL2_MOUSE Ferritin light chain 2 (Ferritin L subunit 2) (Ferritin subunit LG)
          Length = 183

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 39/143 (27%), Positives = 69/143 (48%)
 Frame = +1

Query: 19  EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 198
           EVE  V++L+N        Y  +      +D+ L   G  F  + + +   AE L++ Q 
Sbjct: 12  EVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLKLQN 71

Query: 199 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 378
            RG +  + D +     +  K +E  Q  L +EK+++Q  L +  L   + D  L  FL+
Sbjct: 72  ERGGRALFQDVQKPSQDEWGKTLEAIQAALRLEKNLNQALLDLHALGSARTDPHLCDFLE 131

Query: 379 DRVILRQVKVIRKRANQLRDLKR 447
              + ++VK+I+K  N L +L+R
Sbjct: 132 SHFLDKEVKLIKKMGNHLTNLRR 154

>sp|P29391|FRIL1_MOUSE Ferritin light chain 1 (Ferritin L subunit 1)
          Length = 183

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 40/143 (27%), Positives = 69/143 (48%)
 Frame = +1

Query: 19  EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 198
           EVE  V++L+N        Y  +      +D+ L   G  F  + + +   AE L+ FQ 
Sbjct: 12  EVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLEFQN 71

Query: 199 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 378
           +RG +  + D +     +  K  E  +  L MEK+++Q  L +  L   + D  L  FL+
Sbjct: 72  DRGGRALFQDVQKPSQDEWGKTQEAMEAALAMEKNLNQALLDLHALGSARTDPHLCDFLE 131

Query: 379 DRVILRQVKVIRKRANQLRDLKR 447
              + ++VK+I+K  N L +L+R
Sbjct: 132 SHYLDKEVKLIKKMGNHLTNLRR 154

>sp|P42577|FRIS_LYMST Soma ferritin
          Length = 174

 Score = 62.8 bits (151), Expect = 8e-10
 Identities = 39/143 (27%), Positives = 71/143 (49%)
 Frame = +1

Query: 19  EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 198
           E E  +++ IN   +    Y+ +      +D+ L  F + F+   + E  +AE+L+++Q 
Sbjct: 13  ESEAGINRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQN 72

Query: 199 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 378
            RG +I   D K  +  +    +E  Q  L +EK V+Q  L + KL     D  +  FL+
Sbjct: 73  KRGGRIVLQDIKKPDRDEWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLE 132

Query: 379 DRVILRQVKVIRKRANQLRDLKR 447
              +  QVK I++ ++ + +LKR
Sbjct: 133 SEFLEEQVKSIKELSDYITNLKR 155

>sp|P07229|FRI1_RANCA Ferritin, higher subunit (Ferritin H)
          Length = 176

 Score = 62.8 bits (151), Expect = 8e-10
 Identities = 39/143 (27%), Positives = 71/143 (49%)
 Frame = +1

Query: 19  EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 198
           + E  +++++N   +    Y  +      +D+ L +  + F+     E  +AE+L++ Q 
Sbjct: 12  DCEAAINRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEEREHAEKLMKDQN 71

Query: 199 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 378
            RG +I   D K  E  +    +E  Q  L +EK V+Q  L + K+  +KVD  L  FL+
Sbjct: 72  KRGGRIVLQDVKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKVGSDKVDPHLCDFLE 131

Query: 379 DRVILRQVKVIRKRANQLRDLKR 447
              +  QVK I++  + + +LKR
Sbjct: 132 TEYLEEQVKSIKQLGDYITNLKR 154

>sp|P07798|FRI2_RANCA Ferritin, middle subunit (Ferritin M) (Ferritin X) (Ferritin H')
          Length = 176

 Score = 62.8 bits (151), Expect = 8e-10
 Identities = 40/143 (27%), Positives = 71/143 (49%)
 Frame = +1

Query: 19  EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 198
           + E  V++++N   +    Y  +      +D+ L +    F+     E  +AE+ +++Q 
Sbjct: 12  DCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMKYQN 71

Query: 199 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 378
            RG ++   D K  E  +    +E  Q  L +EK V+Q  L + KLA +KVD  L  FL+
Sbjct: 72  KRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVDPHLCDFLE 131

Query: 379 DRVILRQVKVIRKRANQLRDLKR 447
              +  QVK I++  + + +LKR
Sbjct: 132 SEYLEEQVKDIKRIGDFITNLKR 154

>sp|P02793|FRIL1_RAT Ferritin light chain 1 (Ferritin L subunit 1)
          Length = 183

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 38/143 (26%), Positives = 69/143 (48%)
 Frame = +1

Query: 19  EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 198
           EVE  V++L+N        Y  +      +D+ L   G  F  + + +   AE L++ Q 
Sbjct: 12  EVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLKLQN 71

Query: 199 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 378
            RG +  + D +     +  K +E  +  L +EK+++Q  L +  L   + D  L  FL+
Sbjct: 72  ERGGRALFQDVQKPSQDEWGKTLEAMEAALALEKNLNQALLDLHALGSARTDPHLCDFLE 131

Query: 379 DRVILRQVKVIRKRANQLRDLKR 447
              + ++VK+I+K  N L +L+R
Sbjct: 132 SHFLDKEVKLIKKMGNHLTNLRR 154

>sp|P08267|FRIH_CHICK Ferritin heavy chain (Ferritin H subunit)
          Length = 180

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 39/143 (27%), Positives = 72/143 (50%)
 Frame = +1

Query: 19  EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 198
           + E  +++ IN   +    Y  +      +D+ L +F + F      E  +AE+L++ Q 
Sbjct: 15  DCEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQN 74

Query: 199 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 378
            RG +IF  D K  +  D    +   +  L++EK+V+Q  L + KLA EK D  L  F++
Sbjct: 75  QRGGRIFLQDIKKPDRDDWENGLTAMECALHLEKNVNQSLLELHKLATEKNDPHLCDFIE 134

Query: 379 DRVILRQVKVIRKRANQLRDLKR 447
              +  QVK I++  + + +L++
Sbjct: 135 THYLDEQVKAIKQLGDHVTNLRK 157

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,687,719
Number of Sequences: 369166
Number of extensions: 1052971
Number of successful extensions: 2893
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2893
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 5733423530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_01047

  1. Dr_sW_026_F23
  2. Dr_sW_028_H13