Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_026_F23
(679 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P49947|FRIM_SALSA Ferritin, middle subunit (Ferritin M) 65 1e-10
sp|P17663|FRIH1_XENLA Ferritin heavy chain 1 65 2e-10
sp|P49948|FRIH2_XENLA Ferritin heavy chain 2 (XL2-17) 64 3e-10
sp|P49945|FRIL2_MOUSE Ferritin light chain 2 (Ferritin L su... 64 5e-10
sp|P29391|FRIL1_MOUSE Ferritin light chain 1 (Ferritin L su... 64 5e-10
sp|P42577|FRIS_LYMST Soma ferritin 63 8e-10
sp|P07229|FRI1_RANCA Ferritin, higher subunit (Ferritin H) 63 8e-10
sp|P07798|FRI2_RANCA Ferritin, middle subunit (Ferritin M) ... 63 8e-10
sp|P02793|FRIL1_RAT Ferritin light chain 1 (Ferritin L subu... 62 2e-09
sp|P08267|FRIH_CHICK Ferritin heavy chain (Ferritin H subunit) 61 2e-09
>sp|P49947|FRIM_SALSA Ferritin, middle subunit (Ferritin M)
Length = 176
Score = 65.5 bits (158), Expect = 1e-10
Identities = 40/145 (27%), Positives = 72/145 (49%)
Frame = -1
Query: 661 EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 482
+ E ++++IN Y + +D+ L F F+ + E +A++L+ FQ
Sbjct: 12 DCERAINRMINMEMFASYTYTSMAFYFSRDDVALPGFAHFFKENSEEEREHADKLLSFQN 71
Query: 481 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 302
RG +I D K E + +E Q L +EK+V+Q L + K+A +KVD L FL+
Sbjct: 72 KRGGRILLQDIKKPERDEWGNGLEAMQCALQLEKNVNQALLDLHKIASDKVDPHLCDFLE 131
Query: 301 DRVILRQVKVIRKRANQLRDLKRSE 227
+ QV+ I+K + + +L + +
Sbjct: 132 THYLNEQVEAIKKLGDHITNLTKMD 156
>sp|P17663|FRIH1_XENLA Ferritin heavy chain 1
Length = 176
Score = 64.7 bits (156), Expect = 2e-10
Identities = 38/143 (26%), Positives = 72/143 (50%)
Frame = -1
Query: 661 EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 482
+ E +++++N + Y + +D+ L + F+ E +AE+ +++Q
Sbjct: 12 DCEAAINRMVNLEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQN 71
Query: 481 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 302
RG ++ D K E + + +E Q L +EK V+Q L + KLA +KVD L FL+
Sbjct: 72 KRGGRVVLQDIKKPERDEWSNTLEAMQAALQLEKTVNQALLDLHKLASDKVDPQLCDFLE 131
Query: 301 DRVILRQVKVIRKRANQLRDLKR 233
+ QVK +++ + + +LKR
Sbjct: 132 SEYLEEQVKAMKELGDYITNLKR 154
>sp|P49948|FRIH2_XENLA Ferritin heavy chain 2 (XL2-17)
Length = 176
Score = 64.3 bits (155), Expect = 3e-10
Identities = 38/143 (26%), Positives = 71/143 (49%)
Frame = -1
Query: 661 EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 482
+ E +++++N + Y + +D+ L + F+ E +AE+ +++Q
Sbjct: 12 DCEAAINRMVNMEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQN 71
Query: 481 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 302
RG ++ D K E + +E Q L +EK V+Q L + KLA +KVD L FL+
Sbjct: 72 KRGGRVVLQDIKKPERDEWGNTLEATQAALQLEKTVNQALLDLHKLASDKVDAHLCDFLE 131
Query: 301 DRVILRQVKVIRKRANQLRDLKR 233
+ QVK +++ + + +LKR
Sbjct: 132 SEYLEEQVKAMKQLGDYITNLKR 154
>sp|P49945|FRIL2_MOUSE Ferritin light chain 2 (Ferritin L subunit 2) (Ferritin subunit LG)
Length = 183
Score = 63.5 bits (153), Expect = 5e-10
Identities = 39/143 (27%), Positives = 69/143 (48%)
Frame = -1
Query: 661 EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 482
EVE V++L+N Y + +D+ L G F + + + AE L++ Q
Sbjct: 12 EVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLKLQN 71
Query: 481 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 302
RG + + D + + K +E Q L +EK+++Q L + L + D L FL+
Sbjct: 72 ERGGRALFQDVQKPSQDEWGKTLEAIQAALRLEKNLNQALLDLHALGSARTDPHLCDFLE 131
Query: 301 DRVILRQVKVIRKRANQLRDLKR 233
+ ++VK+I+K N L +L+R
Sbjct: 132 SHFLDKEVKLIKKMGNHLTNLRR 154
>sp|P29391|FRIL1_MOUSE Ferritin light chain 1 (Ferritin L subunit 1)
Length = 183
Score = 63.5 bits (153), Expect = 5e-10
Identities = 40/143 (27%), Positives = 69/143 (48%)
Frame = -1
Query: 661 EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 482
EVE V++L+N Y + +D+ L G F + + + AE L+ FQ
Sbjct: 12 EVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLEFQN 71
Query: 481 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 302
+RG + + D + + K E + L MEK+++Q L + L + D L FL+
Sbjct: 72 DRGGRALFQDVQKPSQDEWGKTQEAMEAALAMEKNLNQALLDLHALGSARTDPHLCDFLE 131
Query: 301 DRVILRQVKVIRKRANQLRDLKR 233
+ ++VK+I+K N L +L+R
Sbjct: 132 SHYLDKEVKLIKKMGNHLTNLRR 154
>sp|P42577|FRIS_LYMST Soma ferritin
Length = 174
Score = 62.8 bits (151), Expect = 8e-10
Identities = 39/143 (27%), Positives = 71/143 (49%)
Frame = -1
Query: 661 EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 482
E E +++ IN + Y+ + +D+ L F + F+ + E +AE+L+++Q
Sbjct: 13 ESEAGINRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQN 72
Query: 481 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 302
RG +I D K + + +E Q L +EK V+Q L + KL D + FL+
Sbjct: 73 KRGGRIVLQDIKKPDRDEWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLE 132
Query: 301 DRVILRQVKVIRKRANQLRDLKR 233
+ QVK I++ ++ + +LKR
Sbjct: 133 SEFLEEQVKSIKELSDYITNLKR 155
>sp|P07229|FRI1_RANCA Ferritin, higher subunit (Ferritin H)
Length = 176
Score = 62.8 bits (151), Expect = 8e-10
Identities = 39/143 (27%), Positives = 71/143 (49%)
Frame = -1
Query: 661 EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 482
+ E +++++N + Y + +D+ L + + F+ E +AE+L++ Q
Sbjct: 12 DCEAAINRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEEREHAEKLMKDQN 71
Query: 481 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 302
RG +I D K E + +E Q L +EK V+Q L + K+ +KVD L FL+
Sbjct: 72 KRGGRIVLQDVKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKVGSDKVDPHLCDFLE 131
Query: 301 DRVILRQVKVIRKRANQLRDLKR 233
+ QVK I++ + + +LKR
Sbjct: 132 TEYLEEQVKSIKQLGDYITNLKR 154
>sp|P07798|FRI2_RANCA Ferritin, middle subunit (Ferritin M) (Ferritin X) (Ferritin H')
Length = 176
Score = 62.8 bits (151), Expect = 8e-10
Identities = 40/143 (27%), Positives = 71/143 (49%)
Frame = -1
Query: 661 EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 482
+ E V++++N + Y + +D+ L + F+ E +AE+ +++Q
Sbjct: 12 DCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMKYQN 71
Query: 481 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 302
RG ++ D K E + +E Q L +EK V+Q L + KLA +KVD L FL+
Sbjct: 72 KRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVDPHLCDFLE 131
Query: 301 DRVILRQVKVIRKRANQLRDLKR 233
+ QVK I++ + + +LKR
Sbjct: 132 SEYLEEQVKDIKRIGDFITNLKR 154
>sp|P02793|FRIL1_RAT Ferritin light chain 1 (Ferritin L subunit 1)
Length = 183
Score = 61.6 bits (148), Expect = 2e-09
Identities = 38/143 (26%), Positives = 69/143 (48%)
Frame = -1
Query: 661 EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 482
EVE V++L+N Y + +D+ L G F + + + AE L++ Q
Sbjct: 12 EVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLKLQN 71
Query: 481 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 302
RG + + D + + K +E + L +EK+++Q L + L + D L FL+
Sbjct: 72 ERGGRALFQDVQKPSQDEWGKTLEAMEAALALEKNLNQALLDLHALGSARTDPHLCDFLE 131
Query: 301 DRVILRQVKVIRKRANQLRDLKR 233
+ ++VK+I+K N L +L+R
Sbjct: 132 SHFLDKEVKLIKKMGNHLTNLRR 154
>sp|P08267|FRIH_CHICK Ferritin heavy chain (Ferritin H subunit)
Length = 180
Score = 61.2 bits (147), Expect = 2e-09
Identities = 39/143 (27%), Positives = 72/143 (50%)
Frame = -1
Query: 661 EVEVEVSKLINRMFHLCQGYRQIQMRCLTEDLNLMSFGRLFELIRQLEVRYAEELIRFQI 482
+ E +++ IN + Y + +D+ L +F + F E +AE+L++ Q
Sbjct: 15 DCEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQN 74
Query: 481 NRGQKIFWFDTKPVEHIDNAKPVEMFQTILNMEKDVHQMTLRVIKLACEKVDVALTSFLK 302
RG +IF D K + D + + L++EK+V+Q L + KLA EK D L F++
Sbjct: 75 QRGGRIFLQDIKKPDRDDWENGLTAMECALHLEKNVNQSLLELHKLATEKNDPHLCDFIE 134
Query: 301 DRVILRQVKVIRKRANQLRDLKR 233
+ QVK I++ + + +L++
Sbjct: 135 THYLDEQVKAIKQLGDHVTNLRK 157
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,687,719
Number of Sequences: 369166
Number of extensions: 1052971
Number of successful extensions: 2893
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2893
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 5733423530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)