DrC_01013
- Cluster detail
- GO Category : Not Available
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_01013 (398 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q9D8S3|ARFG3_MOUSE ADP-ribosylation factor GTPase-activa... 70 2e-12 sp|Q9NP61|ARFG3_HUMAN ADP-ribosylation factor GTPase-activa... 70 2e-12 sp|Q09531|YQP4_CAEEL Hypothetical protein F07F6.4 in chromo... 61 9e-10 sp|Q10367|YDBH_SCHPO Hypothetical protein C22E12.17c in chr... 34 0.092 sp|Q17062|PER_ANTPE Period circadian protein 32 0.46 sp|Q9W5D0|Y34F_DROME Hypothetical protein CG12467 in chromo... 32 0.46 sp|P38682|GLO3_YEAST ADP-ribosylation factor GTPase-activat... 32 0.59 sp|Q9NZW4|DSPP_HUMAN Dentin sialophosphoprotein precursor [... 31 1.0 sp|P18899|DDR48_YEAST Stress protein DDR48 (DNA damage-resp... 30 2.3 sp|P22810|HMOC_DROME Homeotic protein ocelliless (Orthodent... 30 2.3
>sp|Q9D8S3|ARFG3_MOUSE ADP-ribosylation factor GTPase-activating protein 3 (ARF GAP 3) Length = 525 Score = 70.1 bits (170), Expect = 2e-12 Identities = 48/109 (44%), Positives = 60/109 (55%), Gaps = 9/109 (8%) Frame = +3 Query: 18 AQKKFGNAKSISSDAFNNGYNNEDSHT-SHLSRFQGSTSISSDDYFGGGPNTGNMSRKDS 194 AQKKFGN K+ISSD + D T + L R S+SISS D F + RK + Sbjct: 426 AQKKFGNVKAISSDMYFGIQAQTDFETRARLERLSTSSSISSADLF-------DEQRKQT 478 Query: 195 IGSY--------APDMYELKEGIRHGVTKVAGKLSSLANDVMTRVQERY 317 G+Y APDM + K+G+R VAGKLS AN VMT +Q+RY Sbjct: 479 AGNYNLSNVLPNAPDMAQFKQGVR----SVAGKLSVFANGVMTSIQDRY 523
>sp|Q9NP61|ARFG3_HUMAN ADP-ribosylation factor GTPase-activating protein 3 (ARF GAP 3) Length = 516 Score = 69.7 bits (169), Expect = 2e-12 Identities = 47/109 (43%), Positives = 59/109 (54%), Gaps = 9/109 (8%) Frame = +3 Query: 18 AQKKFGNAKSISSDAFNNGYNNEDSHT-SHLSRFQGSTSISSDDYFGGGPNTGNMSRKDS 194 AQKKFGN K+ISSD + + D T + L R S+SISS D F RK Sbjct: 417 AQKKFGNVKAISSDMYFGRQSQADYETRARLERLSASSSISSADLF-------EEPRKQP 469 Query: 195 IGSY--------APDMYELKEGIRHGVTKVAGKLSSLANDVMTRVQERY 317 G+Y APDM + K+G+R VAGKLS AN V+T +Q+RY Sbjct: 470 AGNYSLSSVLPNAPDMAQFKQGVR----SVAGKLSVFANGVVTSIQDRY 514
>sp|Q09531|YQP4_CAEEL Hypothetical protein F07F6.4 in chromosome III Length = 529 Score = 60.8 bits (146), Expect = 9e-10 Identities = 36/93 (38%), Positives = 51/93 (54%) Frame = +3 Query: 21 QKKFGNAKSISSDAFNNGYNNEDSHTSHLSRFQGSTSISSDDYFGGGPNTGNMSRKDSIG 200 QKKFGNAK+ISSD + + S L++ +G TS S+D +G G S+ Sbjct: 431 QKKFGNAKAISSDMYFGTPEMDCETRSALTKCEGQTSFGSEDLWGNGSQQRQSSQ----- 485 Query: 201 SYAPDMYELKEGIRHGVTKVAGKLSSLANDVMT 299 PDM +LK+ R G +KVA K S+L++ T Sbjct: 486 --VPDMSDLKDSFRAGASKVAEKWSTLSSSFST 516
>sp|Q10367|YDBH_SCHPO Hypothetical protein C22E12.17c in chromosome I Length = 486 Score = 34.3 bits (77), Expect = 0.092 Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 14/121 (11%) Frame = +3 Query: 3 NCSELAQKKFGNAKSISSDA-FNNGYNNEDSHTS---HLSRFQGSTSISSDDYFGGGPNT 170 N A+ F + KSISSD F G + ++ LS F+ +T+ISS YFG + Sbjct: 374 NAPTYARDHFASQKSISSDQYFGRGSFDPEAAAEAQERLSSFRDATAISSKSYFGEEED- 432 Query: 171 GNMSRKDSIGSYAPDMYELK----------EGIRHGVTKVAGKLSSLANDVMTRVQERYA 320 ++ S+ PD L+ E I+ + + A KLS D + +V RY Sbjct: 433 ---ENEEGESSHRPDSAYLRDIAETATEDIEAIKVAIHQGAEKLS----DFIQKVGARYN 485 Query: 321 Y 323 + Sbjct: 486 F 486
>sp|Q17062|PER_ANTPE Period circadian protein Length = 849 Score = 32.0 bits (71), Expect = 0.46 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Frame = +3 Query: 36 NAKSISSDAFNNGYNNEDSHTSHLSR--FQGSTSISSDDYFGGGPNTGNMS 182 NAK +S A++N +N S SH S+ GS S S Y GG P+T + S Sbjct: 10 NAK-VSDSAYSNSCSNSQSRRSHSSKSTHSGSNSSGSSGY-GGQPSTSSSS 58
>sp|Q9W5D0|Y34F_DROME Hypothetical protein CG12467 in chromosome 1 Length = 1561 Score = 32.0 bits (71), Expect = 0.46 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = +3 Query: 39 AKSISSDAFNNGYNNEDSHTSHLSRFQGSTSISSDDYFGGGPNTGNMS 182 A S++A +N +SH +H S ++SS + GGG G +S Sbjct: 1486 ATGFSTNATTTAHNTLNSHATHTLNSNHSHTLSSSHHAGGGSQPGTLS 1533
>sp|P38682|GLO3_YEAST ADP-ribosylation factor GTPase-activating protein GLO3 Length = 493 Score = 31.6 bits (70), Expect = 0.59 Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 24/117 (20%) Frame = +3 Query: 24 KKFGNAKSISSDA-FNNGYNNEDSHTS---HLSRFQGSTSISSDDYFG------------ 155 +++G K+ISSD F G +E ++ L F +TSISS YFG Sbjct: 380 ERYGTQKAISSDQLFGRGSFDEAANREAHDKLKTFDNATSISSSSYFGEDKEVDEFGNPI 439 Query: 156 --GGPNTGNMSRKDSIGSY------APDMYELKEGIRHGVTKVAGKLSSLANDVMTR 302 G GN ++S + A D ++ +R V + A KL S D + + Sbjct: 440 NSSGSGAGNFDGRNSNNGFIDFNASADDELQM---LRDVVEQGAEKLGSYLRDYLRK 493
>sp|Q9NZW4|DSPP_HUMAN Dentin sialophosphoprotein precursor [Contains: Dentin phosphoprotein (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)] Length = 1253 Score = 30.8 bits (68), Expect = 1.0 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 5/70 (7%) Frame = +3 Query: 9 SELAQKKFGNAKSISSDAFNNGYNNEDSHTSHLSRFQGSTSISSDDY-----FGGGPNTG 173 S+ + N S SSD+ ++ ++ S +S S STS S+D+ G G N G Sbjct: 1175 SDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESDSQSKSGNGNNNG 1234 Query: 174 NMSRKDSIGS 203 + S DS GS Sbjct: 1235 SDSDSDSEGS 1244
>sp|P18899|DDR48_YEAST Stress protein DDR48 (DNA damage-responsive protein 48) (DDRP 48) (YP 75) (Flocculent-specific protein) Length = 430 Score = 29.6 bits (65), Expect = 2.3 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 8/79 (10%) Frame = +3 Query: 9 SELAQKKFGNAKSISSDAFNN----GYNNEDSHTSHLSRFQGSTSISSDDYFGGGPNT-- 170 S + +G+ S + NN G NN+DS+ S S S+DD +G N Sbjct: 242 SNKKKSSYGSNNDDSYGSSNNNDSYGSNNDDSYGSSNKNKSSYGSSSNDDSYGSSNNDDS 301 Query: 171 --GNMSRKDSIGSYAPDMY 221 + +K S GS D Y Sbjct: 302 YGSSNKKKSSYGSNNDDSY 320
Score = 29.3 bits (64), Expect = 3.0
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +3
Query: 42 KSISSDAFNN----GYNNEDSHTSHLSRFQGSTSISSDDYFGGGPNTGNMSRKDSIGSYA 209
K+ SS NN G NN+DS+ S + S ++D Y ++ + DS GS
Sbjct: 176 KNKSSYGSNNDDSYGSNNDDSYGSSNKKKSSYGSSNNDSYGSNNDDSYGSNNNDSYGSNN 235
Query: 210 PDMY 221
D Y
Sbjct: 236 DDSY 239
Score = 27.7 bits (60), Expect = 8.6
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +3
Query: 36 NAKSISSDAFNN---GYNNEDSHTSHLSRFQGSTSISSDDYFGGGPNTGNMSRKDSIGSY 206
N K S + NN G NN+DS+ S ++ + S ++DD +G N DS GS
Sbjct: 332 NKKKSSYGSSNNDSYGSNNDDSYGSS-NKKKSSYGSNNDDSYGSSNN------NDSYGSN 384
Query: 207 APDMY 221
D Y
Sbjct: 385 NDDSY 389
>sp|P22810|HMOC_DROME Homeotic protein ocelliless (Orthodenticle protein) Length = 671 Score = 29.6 bits (65), Expect = 2.3 Identities = 18/69 (26%), Positives = 35/69 (50%) Frame = +3 Query: 3 NCSELAQKKFGNAKSISSDAFNNGYNNEDSHTSHLSRFQGSTSISSDDYFGGGPNTGNMS 182 +CS + N+ + S + NN ++ ++++ S+ QG++ S GGG + GN S Sbjct: 155 SCSSSSANSRSNSNNNGSSSNNNTQSSGGNNSNKSSQKQGNSQSSQQ---GGGSSGGNNS 211 Query: 183 RKDSIGSYA 209 +S + A Sbjct: 212 NNNSAAAAA 220
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,107,555
Number of Sequences: 369166
Number of extensions: 857897
Number of successful extensions: 2265
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2251
length of database: 68,354,980
effective HSP length: 98
effective length of database: 50,250,950
effective search space used: 1708532300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
