DrC_00929
- Cluster detail
- GO Category :
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00929 (315 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q9BW19|KIFC1_HUMAN Kinesin-like protein KIFC1 (Kinesin-l... 97 1e-20 sp|Q9BVG8|KIFC3_HUMAN Kinesin-like protein KIFC3 96 2e-20 sp|P79955|CTK2_XENLA Carboxy-terminal kinesin 2 (XCTK2) 95 4e-20 sp|O81635|ATK4_ARATH Kinesin-4 (Kinesin-like protein D) 95 6e-20 sp|O35231|KIFC3_MOUSE Kinesin-like protein KIFC3 94 1e-19 sp|P46864|ATK2_ARATH Kinesin-2 (Kinesin-like protein B) 94 1e-19 sp|P46875|ATK3_ARATH Kinesin-3 (Kinesin-like protein C) 94 1e-19 sp|Q07970|ATK1_ARATH Kinesin-1 (Kinesin-like protein A) 93 2e-19 sp|P45962|KLP3_CAEEL Kinesin-like protein klp-3 92 5e-19 sp|P20480|NCD_DROME Claret segregational protein 89 2e-18
>sp|Q9BW19|KIFC1_HUMAN Kinesin-like protein KIFC1 (Kinesin-like protein 2) (Kinesin-related protein HSET) Length = 673 Score = 96.7 bits (239), Expect = 1e-20 Identities = 48/87 (55%), Positives = 61/87 (70%) Frame = +2 Query: 29 RLTEAAFINKSLTSLGQVFQALRTNQLHIPYRNSKLTHILEPSLGGDAKACLFVNISPDE 208 RL E IN SL++LG V AL + H+PYRNSKLT++L+ SLGG AK +FVNISP E Sbjct: 585 RLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLE 644 Query: 209 TNIQESLSSLQFGSNARQVALGQAKAN 289 N+ ESL+SL+F S Q +G A+AN Sbjct: 645 ENVSESLNSLRFASKVNQCVIGTAQAN 671
>sp|Q9BVG8|KIFC3_HUMAN Kinesin-like protein KIFC3 Length = 694 Score = 96.3 bits (238), Expect = 2e-20 Identities = 48/91 (52%), Positives = 63/91 (69%) Frame = +2 Query: 2 VSKTDASGARLTEAAFINKSLTSLGQVFQALRTNQLHIPYRNSKLTHILEPSLGGDAKAC 181 V K+ A G+RL EA INKSL++LG V ALR+ Q H+P+RNSKLT++L+ SL GD+K Sbjct: 542 VGKSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTL 601 Query: 182 LFVNISPDETNIQESLSSLQFGSNARQVALG 274 + V +SP E N E+L SL+F R V LG Sbjct: 602 MVVQVSPVEKNTSETLYSLKFAERVRSVELG 632
>sp|P79955|CTK2_XENLA Carboxy-terminal kinesin 2 (XCTK2) Length = 643 Score = 95.1 bits (235), Expect = 4e-20 Identities = 48/91 (52%), Positives = 63/91 (69%) Frame = +2 Query: 17 ASGARLTEAAFINKSLTSLGQVFQALRTNQLHIPYRNSKLTHILEPSLGGDAKACLFVNI 196 ++G RL E IN SL++LG V +L HIPYRNSKLT++L+ SLGG+AK +FVNI Sbjct: 551 STGDRLKETQCINTSLSTLGMVITSLCNKDSHIPYRNSKLTYLLQNSLGGNAKVLMFVNI 610 Query: 197 SPDETNIQESLSSLQFGSNARQVALGQAKAN 289 SP E N ESL+SL+F S + +G A+AN Sbjct: 611 SPLEENFAESLNSLRFASKVNECVIGTARAN 641
>sp|O81635|ATK4_ARATH Kinesin-4 (Kinesin-like protein D) Length = 987 Score = 94.7 bits (234), Expect = 6e-20 Identities = 46/96 (47%), Positives = 64/96 (66%) Frame = +2 Query: 2 VSKTDASGARLTEAAFINKSLTSLGQVFQALRTNQLHIPYRNSKLTHILEPSLGGDAKAC 181 V K++ +G RL EA INKSL++LG V +L H+PYRNSKLT +L+ SLGG AK Sbjct: 634 VDKSEVTGDRLKEAQHINKSLSALGDVISSLSQKTSHVPYRNSKLTQLLQDSLGGSAKTL 693 Query: 182 LFVNISPDETNIQESLSSLQFGSNARQVALGQAKAN 289 +FV+ISP+ + E++S+L+F V LG A+ N Sbjct: 694 MFVHISPEPDTLGETISTLKFAERVGSVELGAARVN 729
>sp|O35231|KIFC3_MOUSE Kinesin-like protein KIFC3 Length = 687 Score = 94.0 bits (232), Expect = 1e-19 Identities = 47/91 (51%), Positives = 62/91 (68%) Frame = +2 Query: 2 VSKTDASGARLTEAAFINKSLTSLGQVFQALRTNQLHIPYRNSKLTHILEPSLGGDAKAC 181 V K+ A G RL EA IN+SL++LG V ALR+ Q H+P+RNSKLT++L+ SL GD+K Sbjct: 542 VGKSGAEGNRLREAQHINRSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTL 601 Query: 182 LFVNISPDETNIQESLSSLQFGSNARQVALG 274 + V +SP E N E+L SL+F R V LG Sbjct: 602 MVVQVSPVEKNTSETLYSLRFAERVRSVELG 632
>sp|P46864|ATK2_ARATH Kinesin-2 (Kinesin-like protein B) Length = 745 Score = 93.6 bits (231), Expect = 1e-19 Identities = 46/97 (47%), Positives = 67/97 (69%) Frame = +2 Query: 2 VSKTDASGARLTEAAFINKSLTSLGQVFQALRTNQLHIPYRNSKLTHILEPSLGGDAKAC 181 +SK+ ++G RL E INKSL+SLG V AL + H+P+RNSKLT++L+P LGGD+K Sbjct: 637 LSKSGSTGDRLKETQAINKSLSSLGDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTL 696 Query: 182 LFVNISPDETNIQESLSSLQFGSNARQVALGQAKANV 292 +FVNI+P+ ++ ESL SL+F + +G A +V Sbjct: 697 MFVNITPEPSSTGESLCSLRFAARVNACEIGTAHRHV 733
>sp|P46875|ATK3_ARATH Kinesin-3 (Kinesin-like protein C) Length = 754 Score = 93.6 bits (231), Expect = 1e-19 Identities = 47/100 (47%), Positives = 71/100 (71%), Gaps = 2/100 (2%) Frame = +2 Query: 2 VSKTDASGARLTEAAFINKSLTSLGQVFQALRTNQLHIPYRNSKLTHILEPSLGGDAKAC 181 +SK+ ++G RL E INKSL+SLG V AL + H+P+RNSKLT++L+P LGGDAK Sbjct: 646 LSKSGSTGDRLKETQAINKSLSSLGDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDAKTL 705 Query: 182 LFVNISPDETNIQESLSSLQFGS--NARQVALGQAKANVQ 295 +FVNI+P+ ++ ESL SL+F + NA ++ + + N++ Sbjct: 706 MFVNIAPESSSTGESLCSLRFAARVNACEIGTPRRQTNIK 745
>sp|Q07970|ATK1_ARATH Kinesin-1 (Kinesin-like protein A) Length = 793 Score = 93.2 bits (230), Expect = 2e-19 Identities = 46/91 (50%), Positives = 63/91 (69%) Frame = +2 Query: 2 VSKTDASGARLTEAAFINKSLTSLGQVFQALRTNQLHIPYRNSKLTHILEPSLGGDAKAC 181 +SK+ A+G RL E INKSL++L V AL + H+P+RNSKLT++L+P LGGD+K Sbjct: 685 LSKSGATGDRLKETQAINKSLSALSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTL 744 Query: 182 LFVNISPDETNIQESLSSLQFGSNARQVALG 274 +FVNISPD T+ ESL SL+F + +G Sbjct: 745 MFVNISPDPTSAGESLCSLRFAARVNACEIG 775
>sp|P45962|KLP3_CAEEL Kinesin-like protein klp-3 Length = 598 Score = 91.7 bits (226), Expect = 5e-19 Identities = 50/104 (48%), Positives = 66/104 (63%) Frame = +2 Query: 2 VSKTDASGARLTEAAFINKSLTSLGQVFQALRTNQLHIPYRNSKLTHILEPSLGGDAKAC 181 VS+T+A+G L EA INKSL+ LG V ALR NQ HIP+RN +LT ILE SL GD+K Sbjct: 478 VSQTNATGQLLKEAQAINKSLSELGNVVLALRQNQKHIPFRNCQLTRILEDSLNGDSKTL 537 Query: 182 LFVNISPDETNIQESLSSLQFGSNARQVALGQAKANVQKAVPAK 313 + V++SPD ++ ES+SS+ F QV K+ K P + Sbjct: 538 VIVHLSPDAKSLNESISSVNFAEKIGQVF---TKSGTMKREPTR 578
>sp|P20480|NCD_DROME Claret segregational protein Length = 700 Score = 89.4 bits (220), Expect = 2e-18 Identities = 44/95 (46%), Positives = 63/95 (66%) Frame = +2 Query: 5 SKTDASGARLTEAAFINKSLTSLGQVFQALRTNQLHIPYRNSKLTHILEPSLGGDAKACL 184 S++ + R+TE IN+SL+ L V AL Q HIPYRNSKLTH+L PSLGG++K + Sbjct: 584 SESPKTSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLM 643 Query: 185 FVNISPDETNIQESLSSLQFGSNARQVALGQAKAN 289 F+N+SP + QES+ SL+F ++ + +AK N Sbjct: 644 FINVSPFQDCFQESVKSLRFAASVNSCKMTKAKRN 678
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,141,831
Number of Sequences: 369166
Number of extensions: 508111
Number of successful extensions: 1277
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 68,354,980
effective HSP length: 73
effective length of database: 54,869,325
effective search space used: 1700949075
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
