Planaria EST Database

DrC_00770

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00770
         (823 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P51880|FABPB_MOUSE  Fatty acid-binding protein, brain (B-...   107   5e-23
sp|Q09139|FABB_BOVIN  Fatty acid-binding protein, brain (B-F...   106   9e-23
sp|P55051|FABPB_RAT  Fatty acid-binding protein, brain (B-FA...   105   2e-22
sp|O15540|FABPB_HUMAN  Fatty acid-binding protein, brain (B-...   100   4e-21
sp|P07483|FABPH_RAT  Fatty acid-binding protein, heart (H-FA...   100   6e-21
sp|O02772|FABH_PIG  Fatty acid-binding protein, heart (H-FAB...   100   6e-21
sp|P10790|FABPH_BOVIN  Fatty acid-binding protein, heart (H-...   100   8e-21
sp|P05413|FABPH_HUMAN  Fatty acid-binding protein, heart (H-...   100   8e-21
sp|P11404|FABPH_MOUSE  Fatty acid-binding protein, heart (H-...    99   1e-20
sp|Q99P61|FABPH_SPETR  Fatty acid-binding protein, heart (H-...    98   2e-20

>sp|P51880|FABPB_MOUSE Fatty acid-binding protein, brain (B-FABP) (Brain lipid-binding
           protein) (BLBP)
          Length = 132

 Score =  107 bits (266), Expect = 5e-23
 Identities = 58/132 (43%), Positives = 77/132 (58%)
 Frame = +3

Query: 354 MDAFVGKWHLTETENFENYMKQLGVGVITRKLANSSKPTQEITVTDGVTHIXXXXXXXXX 533
           +DAF   W LT+++NF+ YMK LGVG  TR++ N +KPT  I+   G   I         
Sbjct: 2   VDAFCATWKLTDSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGGKVVIRTQCTFKNT 61

Query: 534 XXXXXXXEEFEETSADDQICKSIVKKVSDTKFVHTQKRDKSDNVMTRELIDGKYVLTLEF 713
                  EEFEETS DD+ CKS+V+   D K +H QK D  +   TRE+ DGK V+TL F
Sbjct: 62  EINFQLGEEFEETSIDDRNCKSVVRLDGD-KLIHVQKWDGKETNCTREIKDGKMVVTLTF 120

Query: 714 DKVVATRKYERS 749
             +VA R YE++
Sbjct: 121 GDIVAVRCYEKA 132

>sp|Q09139|FABB_BOVIN Fatty acid-binding protein, brain (B-FABP)
          Length = 131

 Score =  106 bits (264), Expect = 9e-23
 Identities = 58/131 (44%), Positives = 77/131 (58%)
 Frame = +3

Query: 354 MDAFVGKWHLTETENFENYMKQLGVGVITRKLANSSKPTQEITVTDGVTHIXXXXXXXXX 533
           +DAFVG W LTE++NF+ YMK LGVG  TR++ N +KPT  I+V      I         
Sbjct: 1   VDAFVGTWKLTESQNFDEYMKSLGVGFATRQVGNMTKPTLIISVNGDTEIIKTQSTFKNT 60

Query: 534 XXXXXXXEEFEETSADDQICKSIVKKVSDTKFVHTQKRDKSDNVMTRELIDGKYVLTLEF 713
                  EEF++T+ADDQ  KSIV  +   K VH QK D  ++ + RE++ GK +LTL  
Sbjct: 61  EISFHLGEEFDDTTADDQKVKSIV-TLDGGKLVHVQKWDGQESSLVREMVAGKLILTLTH 119

Query: 714 DKVVATRKYER 746
             VVA R YE+
Sbjct: 120 GDVVAVRHYEK 130

>sp|P55051|FABPB_RAT Fatty acid-binding protein, brain (B-FABP) (Brain lipid-binding
           protein) (BLBP)
          Length = 132

 Score =  105 bits (261), Expect = 2e-22
 Identities = 57/132 (43%), Positives = 76/132 (57%)
 Frame = +3

Query: 354 MDAFVGKWHLTETENFENYMKQLGVGVITRKLANSSKPTQEITVTDGVTHIXXXXXXXXX 533
           +DAF   W LT+++NF+ YMK LGVG  TR++ N +KPT  I+   G   I         
Sbjct: 2   VDAFCATWKLTDSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGGKVVIRTQCTFKNT 61

Query: 534 XXXXXXXEEFEETSADDQICKSIVKKVSDTKFVHTQKRDKSDNVMTRELIDGKYVLTLEF 713
                  EEFEETS DD+ CKS+++   D K +H QK D  +    RE+ DGK V+TL F
Sbjct: 62  EISFQLGEEFEETSIDDRNCKSVIRLDGD-KLIHVQKWDGKETNCVREIKDGKMVVTLTF 120

Query: 714 DKVVATRKYERS 749
             VVA R YE++
Sbjct: 121 GDVVAVRCYEKA 132

>sp|O15540|FABPB_HUMAN Fatty acid-binding protein, brain (B-FABP) (Brain lipid-binding
           protein) (BLBP) (Mammary derived growth inhibitor
           related)
          Length = 132

 Score =  100 bits (250), Expect = 4e-21
 Identities = 56/132 (42%), Positives = 74/132 (56%)
 Frame = +3

Query: 354 MDAFVGKWHLTETENFENYMKQLGVGVITRKLANSSKPTQEITVTDGVTHIXXXXXXXXX 533
           ++AF   W LT ++NF+ YMK LGVG  TR++ N +KPT  I+       I         
Sbjct: 2   VEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKNT 61

Query: 534 XXXXXXXEEFEETSADDQICKSIVKKVSDTKFVHTQKRDKSDNVMTRELIDGKYVLTLEF 713
                  EEF+ET+ADD+ CKS+V    D K VH QK D  +    RE+ DGK V+TL F
Sbjct: 62  EISFQLGEEFDETTADDRNCKSVVSLDGD-KLVHIQKWDGKETNFVREIKDGKMVMTLTF 120

Query: 714 DKVVATRKYERS 749
             VVA R YE++
Sbjct: 121 GDVVAVRHYEKA 132

>sp|P07483|FABPH_RAT Fatty acid-binding protein, heart (H-FABP) (Heart-type fatty
           acid-binding protein)
          Length = 133

 Score =  100 bits (248), Expect = 6e-21
 Identities = 55/130 (42%), Positives = 74/130 (56%)
 Frame = +3

Query: 357 DAFVGKWHLTETENFENYMKQLGVGVITRKLANSSKPTQEITVTDGVTHIXXXXXXXXXX 536
           DAFVG W L +++NF++YMK LGVG  TR++A+ +KPT  I        I          
Sbjct: 3   DAFVGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDTITIKTHSTFKNTE 62

Query: 537 XXXXXXEEFEETSADDQICKSIVKKVSDTKFVHTQKRDKSDNVMTRELIDGKYVLTLEFD 716
                  EF+E +ADD+  KS+V  +   K VH QK D  +  +TREL DGK +LTL   
Sbjct: 63  ISFQLGVEFDEVTADDRKVKSVV-TLDGGKLVHVQKWDGQETTLTRELSDGKLILTLTHG 121

Query: 717 KVVATRKYER 746
            VV+TR YE+
Sbjct: 122 NVVSTRTYEK 131

>sp|O02772|FABH_PIG Fatty acid-binding protein, heart (H-FABP) (Heart-type fatty
           acid-binding protein)
          Length = 133

 Score =  100 bits (248), Expect = 6e-21
 Identities = 54/131 (41%), Positives = 74/131 (56%)
 Frame = +3

Query: 354 MDAFVGKWHLTETENFENYMKQLGVGVITRKLANSSKPTQEITVTDGVTHIXXXXXXXXX 533
           +DAF G W L +++NF++YMK +GVG  TR++AN +KPT  I V      I         
Sbjct: 2   VDAFAGTWKLVDSKNFDDYMKSIGVGFATRQVANMTKPTTIIEVNGDTIIIKTQSTFKST 61

Query: 534 XXXXXXXEEFEETSADDQICKSIVKKVSDTKFVHTQKRDKSDNVMTRELIDGKYVLTLEF 713
                   EF+ET+ADD+  KSIV  +   K VH QK +  +  + REL+DGK +LTL  
Sbjct: 62  EISFKLGVEFDETTADDRKVKSIV-TLDGGKLVHLQKWNGQETTLVRELVDGKLILTLTH 120

Query: 714 DKVVATRKYER 746
              V TR YE+
Sbjct: 121 GSAVCTRTYEK 131

>sp|P10790|FABPH_BOVIN Fatty acid-binding protein, heart (H-FABP) (Heart-type fatty
           acid-binding protein) (Mammary-derived growth inhibitor)
           (MDGI)
          Length = 133

 Score = 99.8 bits (247), Expect = 8e-21
 Identities = 54/131 (41%), Positives = 74/131 (56%)
 Frame = +3

Query: 354 MDAFVGKWHLTETENFENYMKQLGVGVITRKLANSSKPTQEITVTDGVTHIXXXXXXXXX 533
           +DAFVG W L +++NF++YMK LGVG  TR++ N +KPT  I V      I         
Sbjct: 2   VDAFVGTWKLVDSKNFDDYMKSLGVGFATRQVGNMTKPTTIIEVNGDTVIIKTQSTFKNT 61

Query: 534 XXXXXXXEEFEETSADDQICKSIVKKVSDTKFVHTQKRDKSDNVMTRELIDGKYVLTLEF 713
                   EF+ET+ADD+  KSIV  +   K VH QK +  +  + RE++DGK +LTL  
Sbjct: 62  EISFKLGVEFDETTADDRKVKSIV-TLDGGKLVHVQKWNGQETSLVREMVDGKLILTLTH 120

Query: 714 DKVVATRKYER 746
              V TR YE+
Sbjct: 121 GTAVCTRTYEK 131

>sp|P05413|FABPH_HUMAN Fatty acid-binding protein, heart (H-FABP) (Heart-type fatty
           acid-binding protein) (Muscle fatty acid-binding
           protein) (M-FABP) (Mammary-derived growth inhibitor)
           (MDGI)
          Length = 133

 Score = 99.8 bits (247), Expect = 8e-21
 Identities = 54/131 (41%), Positives = 75/131 (57%)
 Frame = +3

Query: 354 MDAFVGKWHLTETENFENYMKQLGVGVITRKLANSSKPTQEITVTDGVTHIXXXXXXXXX 533
           +DAF+G W L +++NF++YMK LGVG  TR++A+ +KPT  I     +  +         
Sbjct: 2   VDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKNT 61

Query: 534 XXXXXXXEEFEETSADDQICKSIVKKVSDTKFVHTQKRDKSDNVMTRELIDGKYVLTLEF 713
                   EF+ET+ADD+  KSIV  +   K VH QK D  +  + RELIDGK +LTL  
Sbjct: 62  EISFKLGVEFDETTADDRKVKSIV-TLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH 120

Query: 714 DKVVATRKYER 746
              V TR YE+
Sbjct: 121 GTAVCTRTYEK 131

>sp|P11404|FABPH_MOUSE Fatty acid-binding protein, heart (H-FABP) (Heart-type fatty
           acid-binding protein) (Mammary-derived growth inhibitor)
           (MDGI)
          Length = 133

 Score = 99.0 bits (245), Expect = 1e-20
 Identities = 53/130 (40%), Positives = 75/130 (57%)
 Frame = +3

Query: 357 DAFVGKWHLTETENFENYMKQLGVGVITRKLANSSKPTQEITVTDGVTHIXXXXXXXXXX 536
           DAFVG W L +++NF++YMK LGVG  TR++A+ +KPT  I        I          
Sbjct: 3   DAFVGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDTITIKTQSTFKNTE 62

Query: 537 XXXXXXEEFEETSADDQICKSIVKKVSDTKFVHTQKRDKSDNVMTRELIDGKYVLTLEFD 716
                  EF+E +ADD+  KS+V  +   K +H QK +  +  +TREL+DGK +LTL   
Sbjct: 63  INFQLGIEFDEVTADDRKVKSLV-TLDGGKLIHVQKWNGQETTLTRELVDGKLILTLTHG 121

Query: 717 KVVATRKYER 746
            VV+TR YE+
Sbjct: 122 SVVSTRTYEK 131

>sp|Q99P61|FABPH_SPETR Fatty acid-binding protein, heart (H-FABP) (Heart-type fatty
           acid-binding protein)
          Length = 133

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 54/131 (41%), Positives = 74/131 (56%)
 Frame = +3

Query: 354 MDAFVGKWHLTETENFENYMKQLGVGVITRKLANSSKPTQEITVTDGVTHIXXXXXXXXX 533
           +DAFVG W L +++NF++YMK LGVG  TR++A+ +KPT  I        +         
Sbjct: 2   VDAFVGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDTIILKTQSTFKNT 61

Query: 534 XXXXXXXEEFEETSADDQICKSIVKKVSDTKFVHTQKRDKSDNVMTRELIDGKYVLTLEF 713
                  +EF+ET+ADD+  KS V  +   K VH QK D  +  + REL DGK +LTL  
Sbjct: 62  EISFQLGKEFDETTADDRKVKSTV-TLDGGKLVHVQKWDGQETTLVRELNDGKLILTLTH 120

Query: 714 DKVVATRKYER 746
             VV TR YE+
Sbjct: 121 GSVVCTRTYEK 131

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,648,425
Number of Sequences: 369166
Number of extensions: 1182050
Number of successful extensions: 2553
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2465
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7907893860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00770

  1. Dr_sW_019_O20
  2. Dr_sW_001_L08