Planaria EST Database

DrC_00764

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00764
         (1320 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P19859|IVBCI_NAJNA  Venom chymotrypsin inhibitor                32   4.1  

>sp|P19859|IVBCI_NAJNA Venom chymotrypsin inhibitor
          Length = 57

 Score = 32.0 bits (71), Expect = 4.1
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 601 YNSYDNNCHNFYNNGCHNNCLRSAWCNRC 687
           YN Y N CH+F  +GC  N  R    + C
Sbjct: 23  YNRYSNTCHSFTYSGCGKNANRFRTIDEC 51

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124,927,871
Number of Sequences: 369166
Number of extensions: 2212977
Number of successful extensions: 6404
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6295
length of database: 68,354,980
effective HSP length: 114
effective length of database: 47,295,190
effective search space used: 15370936750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00764

  1. Dr_sW_019_N24
  2. Dr_sW_007_K10