Planarian EST Database

DrC_00627

Cluster detail
GO Category : Not Available
Consensus Sequence :
>DrC_00627 ATTTGATATCATGGAAGATCGAATAATATTTCAACCAAGTGGCTTATTGAAAGATTCTCG GATTTACAATATTGAATGCGATTTAGATTTCTTACCTCCAATTGAAATTATCGATAAGAT TATGATTGATTTTGTCATGTATCGAATTAGTGTAAGAGGATTCCCAGATTTGAATATATT TCCCGACAAAGTCGGAAGAACCAAGTACCACCCAGTTACAAATGACATTTTAAATAAATT AACAGATAAGTCTGATGAATTTGAAAGGCAATATTACCCAAGATTTGAAAATAGAAAAAG TTTGTTAGAAAAAATTCCAGAAAGGGCATTTTTAGATTTTATTGACACACTTCATGGAAT ATTTGAAGATAATCAAATCAATTGGGGTCGAATAATTGGTTATTTTACTTTTGTTGGATC ATATTGTACAGCATGTATTGAACATGGTATGGTTAGAATCGTATATAATTTAGTCGAATA TGCAATTAAATATATGAATACTAATCTCAGTGGTTGGATGTCAAGCAATGGTGGATGGCG TGGCTTGGGACTAGCTTTATCAACTGAATCTTTTGAATTGAGATTTTAATATTCATCTGA TCAATTAATTTGTATTGTAAATGTAATGATAAATACAATCCAACTATAATTTCCAAT

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00627
         (657 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q07816|BCLX_CHICK  Apoptosis regulator Bcl-X (Bcl-2-like ...    75   1e-13
sp|O77737|BCLX_PIG  Apoptosis regulator Bcl-X (Bcl-2-like 1 ...    73   6e-13
sp|P53563|BCLX_RAT  Apoptosis regulator Bcl-X (Bcl-2-like 1 ...    72   1e-12
sp|Q64373|BCLX_MOUSE  Apoptosis regulator Bcl-X (Bcl-2-like ...    72   1e-12
sp|Q07817|BCLX_HUMAN  Apoptosis regulator Bcl-X (Bcl-2-like ...    72   1e-12
sp|Q00709|BCL2_CHICK  Apoptosis regulator Bcl-2                    70   6e-12
sp|Q91827|AR1_XENLA  Apoptosis regulator R1 (XR1)                  69   8e-12
sp|P10415|BCL2_HUMAN  Apoptosis regulator Bcl-2                    67   5e-11
sp|Q91828|AR11_XENLA  Apoptosis regulator R11 (XR11)               67   5e-11
sp|Q9JJV8|BCL2_CRIGR  Apoptosis regulator Bcl-2                    66   9e-11

>sp|Q07816|BCLX_CHICK Apoptosis regulator Bcl-X (Bcl-2-like 1 protein)
          Length = 229

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = +2

Query: 221 NDILNKLTDKSDEFERQYYPRFENRKSLLEKIPERAFLDFIDTLHGIFEDNQINWGRIIG 400
           +D+   L D  DEFE +Y   F +  S L   P  A+  F   ++ +F D  +NWGRI+ 
Sbjct: 80  SDVRQALRDAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFHDG-VNWGRIVA 138

Query: 401 YFTFVGSYCTACIEHGMVRIVYNLVEYAIKYMNTNLSGWMSSNGGW-RGLGLALSTESFE 577
           +F+F G+ C   ++  M  +V  +V +   Y+  +L  W+  NGGW R + L  +  + E
Sbjct: 139 FFSFGGALCVESVDKEMRVLVGRIVSWMTTYLTDHLDPWIQENGGWERFVDLYGNNAAAE 198

Query: 578 LR 583
           LR
Sbjct: 199 LR 200

>sp|O77737|BCLX_PIG Apoptosis regulator Bcl-X (Bcl-2-like 1 protein)
          Length = 233

 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 34/100 (34%), Positives = 53/100 (53%)
 Frame = +2

Query: 239 LTDKSDEFERQYYPRFENRKSLLEKIPERAFLDFIDTLHGIFEDNQINWGRIIGYFTFVG 418
           L +  DEFE +Y   F +  S L   P  A+  F   L+ +F D  +NWGRI+ +F+F G
Sbjct: 90  LREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVLNELFRDG-VNWGRIVAFFSFGG 148

Query: 419 SYCTACIEHGMVRIVYNLVEYAIKYMNTNLSGWMSSNGGW 538
           + C   ++  M  +V  +  +   Y+N +L  W+  NGGW
Sbjct: 149 ALCVESVDKEMQVLVSRIATWMATYLNDHLEPWIQENGGW 188

>sp|P53563|BCLX_RAT Apoptosis regulator Bcl-X (Bcl-2-like 1 protein)
          Length = 233

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 33/100 (33%), Positives = 53/100 (53%)
 Frame = +2

Query: 239 LTDKSDEFERQYYPRFENRKSLLEKIPERAFLDFIDTLHGIFEDNQINWGRIIGYFTFVG 418
           L +  DEFE +Y   F +  S L   P  A+  F   ++ +F D  +NWGRI+ +F+F G
Sbjct: 90  LREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDG-VNWGRIVAFFSFGG 148

Query: 419 SYCTACIEHGMVRIVYNLVEYAIKYMNTNLSGWMSSNGGW 538
           + C   ++  M  +V  +  +   Y+N +L  W+  NGGW
Sbjct: 149 ALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGW 188

>sp|Q64373|BCLX_MOUSE Apoptosis regulator Bcl-X (Bcl-2-like 1 protein)
          Length = 233

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 33/100 (33%), Positives = 53/100 (53%)
 Frame = +2

Query: 239 LTDKSDEFERQYYPRFENRKSLLEKIPERAFLDFIDTLHGIFEDNQINWGRIIGYFTFVG 418
           L +  DEFE +Y   F +  S L   P  A+  F   ++ +F D  +NWGRI+ +F+F G
Sbjct: 90  LREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDG-VNWGRIVAFFSFGG 148

Query: 419 SYCTACIEHGMVRIVYNLVEYAIKYMNTNLSGWMSSNGGW 538
           + C   ++  M  +V  +  +   Y+N +L  W+  NGGW
Sbjct: 149 ALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGW 188

>sp|Q07817|BCLX_HUMAN Apoptosis regulator Bcl-X (Bcl-2-like 1 protein)
          Length = 233

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 33/100 (33%), Positives = 53/100 (53%)
 Frame = +2

Query: 239 LTDKSDEFERQYYPRFENRKSLLEKIPERAFLDFIDTLHGIFEDNQINWGRIIGYFTFVG 418
           L +  DEFE +Y   F +  S L   P  A+  F   ++ +F D  +NWGRI+ +F+F G
Sbjct: 90  LREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDG-VNWGRIVAFFSFGG 148

Query: 419 SYCTACIEHGMVRIVYNLVEYAIKYMNTNLSGWMSSNGGW 538
           + C   ++  M  +V  +  +   Y+N +L  W+  NGGW
Sbjct: 149 ALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGW 188

>sp|Q00709|BCL2_CHICK Apoptosis regulator Bcl-2
          Length = 233

 Score = 69.7 bits (169), Expect = 6e-12
 Identities = 33/100 (33%), Positives = 48/100 (48%)
 Frame = +2

Query: 239 LTDKSDEFERQYYPRFENRKSLLEKIPERAFLDFIDTLHGIFEDNQINWGRIIGYFTFVG 418
           L    DEF R+Y   F      L   P  A   F+  +  +F D  +NWGRI+ +F F G
Sbjct: 91  LRQAGDEFSRRYQRDFAQMSGQLHLTPFTAHGRFVAVVEELFRDG-VNWGRIVAFFEFGG 149

Query: 419 SYCTACIEHGMVRIVYNLVEYAIKYMNTNLSGWMSSNGGW 538
             C   +   M  +V N+  +  +Y+N +L  W+  NGGW
Sbjct: 150 VMCVESVNREMSPLVDNIATWMTEYLNRHLHNWIQDNGGW 189

>sp|Q91827|AR1_XENLA Apoptosis regulator R1 (XR1)
          Length = 228

 Score = 69.3 bits (168), Expect = 8e-12
 Identities = 29/97 (29%), Positives = 50/97 (51%)
 Frame = +2

Query: 254 DEFERQYYPRFENRKSLLEKIPERAFLDFIDTLHGIFEDNQINWGRIIGYFTFVGSYCTA 433
           DEFE ++   F    + +   P  A+  F +    +F+   +NWGRI+ +F F  + C  
Sbjct: 86  DEFEERFRQAFSEISTQIHVTPGTAYARFAEVAGSLFQGG-VNWGRIVAFFVFGAALCAE 144

Query: 434 CIEHGMVRIVYNLVEYAIKYMNTNLSGWMSSNGGWRG 544
            +   M  ++  + ++ + Y+ TNL  W+ SNGGW G
Sbjct: 145 SVNKEMSPLLPRIQDWMVTYLETNLRDWIQSNGGWNG 181

>sp|P10415|BCL2_HUMAN Apoptosis regulator Bcl-2
          Length = 239

 Score = 66.6 bits (161), Expect = 5e-11
 Identities = 35/109 (32%), Positives = 51/109 (46%)
 Frame = +2

Query: 212 PVTNDILNKLTDKSDEFERQYYPRFENRKSLLEKIPERAFLDFIDTLHGIFEDNQINWGR 391
           PV   +   L    D+F R+Y   F    S L   P  A   F   +  +F D  +NWGR
Sbjct: 88  PVPPVVHLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTARGRFATVVEELFRDG-VNWGR 146

Query: 392 IIGYFTFVGSYCTACIEHGMVRIVYNLVEYAIKYMNTNLSGWMSSNGGW 538
           I+ +F F G  C   +   M  +V N+  +  +Y+N +L  W+  NGGW
Sbjct: 147 IVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWIQDNGGW 195

>sp|Q91828|AR11_XENLA Apoptosis regulator R11 (XR11)
          Length = 204

 Score = 66.6 bits (161), Expect = 5e-11
 Identities = 32/108 (29%), Positives = 53/108 (49%)
 Frame = +2

Query: 215 VTNDILNKLTDKSDEFERQYYPRFENRKSLLEKIPERAFLDFIDTLHGIFEDNQINWGRI 394
           V  ++L  L + ++EFE +Y   F +  S L    + A   F   +  +F D   NWGRI
Sbjct: 54  VEEEVLQALLEATEEFELRYQRAFSDLTSQLHITQDTAQQSFQQVMGELFRDGT-NWGRI 112

Query: 395 IGYFTFVGSYCTACIEHGMVRIVYNLVEYAIKYMNTNLSGWMSSNGGW 538
           + +F+F  + C       M  ++  +V++ + Y+   L  WM  NGGW
Sbjct: 113 VAFFSFGRALCVESANKEMTDLLPRIVQWMVNYLEHTLQPWMQENGGW 160

>sp|Q9JJV8|BCL2_CRIGR Apoptosis regulator Bcl-2
          Length = 236

 Score = 65.9 bits (159), Expect = 9e-11
 Identities = 35/109 (32%), Positives = 51/109 (46%)
 Frame = +2

Query: 212 PVTNDILNKLTDKSDEFERQYYPRFENRKSLLEKIPERAFLDFIDTLHGIFEDNQINWGR 391
           PV   +   L    D+F R+Y   F    S L   P  A   F   +  +F D  +NWGR
Sbjct: 85  PVPPVVHLTLRRAGDDFSRRYRRDFAEMSSQLHLTPFTARGRFATVVEELFRDG-VNWGR 143

Query: 392 IIGYFTFVGSYCTACIEHGMVRIVYNLVEYAIKYMNTNLSGWMSSNGGW 538
           I+ +F F G  C   +   M  +V N+  +  +Y+N +L  W+  NGGW
Sbjct: 144 IVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWIQDNGGW 192

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,233,057
Number of Sequences: 369166
Number of extensions: 1445571
Number of successful extensions: 3922
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3903
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5462583840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00627

Planaria EST Database

DrC_00627

BLASTX 2.2.13 [Nov-27-2005]

Cluster detail