DrC_00618
- Cluster detail
- GO Category : Not Available
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00618 (790 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q6P5Z2|PKN3_HUMAN Protein kinase N3 (Protein kinase PKN-... 36 0.14 sp|P45481|CBP_MOUSE CREB-binding protein 35 0.31 sp|P25306|THD1_LYCES Threonine dehydratase biosynthetic, ch... 33 0.68 sp|Q9H4A3|WNK1_HUMAN Serine/threonine-protein kinase WNK1 (... 33 0.68 sp|Q9R0I7|YLPM_MOUSE YLP motif containing protein 1 (Nuclea... 32 1.5 sp|P39806|SALM_DROVI Homeotic protein spalt-major 32 2.0 sp|Q96RK0|CIC_HUMAN Protein capicua homolog 32 2.0 sp|Q5K8D3|ATG1_CRYNE Serine/threonine-protein kinase ATG1 (... 32 2.0 sp|P46493|THD1_HAEIN Threonine dehydratase biosynthetic (Th... 32 2.6 sp|Q09277|YPX5_CAEEL Hypothetical protein F40H6.5 in chromo... 32 2.6
>sp|Q6P5Z2|PKN3_HUMAN Protein kinase N3 (Protein kinase PKN-beta) (Protein-kinase C-related kinase 3) Length = 889 Score = 35.8 bits (81), Expect = 0.14 Identities = 19/57 (33%), Positives = 28/57 (49%) Frame = +2 Query: 161 SLISNPSSPGRISTPQAFVGSPTDARRSAPPAGSVQVLPIVSGVRSSYVPPQDPPRV 331 +L+ SSP IS P+ +PT R ++ PA LP + + PP PPR+ Sbjct: 460 NLLPPCSSPSTISPPKGCPRTPTTLREASDPATPSNFLPKKTPLGEEMTPPPKPPRL 516
>sp|P45481|CBP_MOUSE CREB-binding protein Length = 2441 Score = 34.7 bits (78), Expect = 0.31 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 5/71 (7%) Frame = +2 Query: 176 PSSPGRISTPQAFVGSPTDARRSAPPAGSVQVLPIVSGVRSSYVPPQ-----DPPRVGQA 340 P++P + STP + +PT S P A Q P V + V PQ PP V Sbjct: 884 PAAPTQPSTPVSSGQTPTPTPGSVPSAAQTQSTPTVQAAAQAQVTPQPQTPVQPPSVATP 943 Query: 341 SSTLRQQILPV 373 S+ +QQ PV Sbjct: 944 QSS-QQQPTPV 953
>sp|P25306|THD1_LYCES Threonine dehydratase biosynthetic, chloroplast precursor (Threonine deaminase) (TD) Length = 595 Score = 33.5 bits (75), Expect = 0.68 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = +2 Query: 302 YVPPQDPPRVGQASSTLRQQILPVLKDLEAVYSRVAGG 415 Y+PP D P V + T+ +I LKD+ AV+ V GG Sbjct: 234 YIPPFDDPGVIKGQGTIGTEINRQLKDIHAVFIPVGGG 271
>sp|Q9H4A3|WNK1_HUMAN Serine/threonine-protein kinase WNK1 (Protein kinase with no lysine 1) (Protein kinase, lysine-deficient 1) (Kinase deficient protein) Length = 2382 Score = 33.5 bits (75), Expect = 0.68 Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 2/115 (1%) Frame = +2 Query: 140 TVQIPRSSLISNPSSPGRISTPQAFV--GSPTDARRSAPPAGSVQVLPIVSGVRSSYVPP 313 TV +P + +++ PG++STP + G S PP VLP+ + + + +P Sbjct: 1720 TVALPVTPVVT----PGQVSTPVSTTTSGVKPGTAPSKPPLTKAPVLPVGTELPAGTLPS 1775 Query: 314 QDPPRVGQASSTLRQQILPVLKDLEAVYSRVAGGRHQPIAELTAAFEMVDSISPT 478 + P S T QQ L+DL+A R I +T+A V +PT Sbjct: 1776 EQLPPFPGPSLTQSQQ---PLEDLDAQLRRTLS---PEIITVTSAVGPVSMAAPT 1824
>sp|Q9R0I7|YLPM_MOUSE YLP motif containing protein 1 (Nuclear protein ZAP3) Length = 1386 Score = 32.3 bits (72), Expect = 1.5 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 12/82 (14%) Frame = +2 Query: 152 PRSSLISNPSSPGRISTPQAF-----VGSPTDA--RRSAPPAGSV-----QVLPIVSGVR 295 P S + NPS PG P ++ +G P + R SAPPA S +PI Sbjct: 733 PPDSRLQNPSRPGMYPPPGSYRPPPPMGKPPGSIVRPSAPPARSSIPMTRPPVPIPPPPP 792 Query: 296 SSYVPPQDPPRVGQASSTLRQQ 361 PP PP + +S+++Q+ Sbjct: 793 PPPPPPPPPPVIKSKTSSVKQE 814
>sp|P39806|SALM_DROVI Homeotic protein spalt-major Length = 1402 Score = 32.0 bits (71), Expect = 2.0 Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 3/122 (2%) Frame = +2 Query: 104 MQTNPEIILREQTVQIPRSSLISNPSSPGRISTPQAFVGSPTDARRSAPPAGSVQVLPIV 283 ++ +P ++ + Q P S+ SNP+S G S A SAP + S Q P Sbjct: 1049 LRIDPTGVVNINSHQRPHSAA-SNPNSIGSAS-----------ASPSAPTSPSSQPKPSC 1096 Query: 284 SGVRSSYVPPQDPPRVGQASSTLRQQILP---VLKDLEAVYSRVAGGRHQPIAELTAAFE 454 S VRSS P + Q + L + LP + Y ++ R +P+A ++ Sbjct: 1097 SPVRSSCSPVRSVSETSQGALDLTPRALPPPLASSSSRSPYRQLLSVRRRPLARSVSSHR 1156 Query: 455 MV 460 V Sbjct: 1157 CV 1158
>sp|Q96RK0|CIC_HUMAN Protein capicua homolog Length = 1608 Score = 32.0 bits (71), Expect = 2.0 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%) Frame = +2 Query: 248 PPAGSVQVLPIVSGVRSSYVPPQDPPRVGQASSTLRQQILPVLKDLEAVYSRVAGGRHQP 427 PP+ +Q+ P+ S VPP P + +S ++ +LP Y + AGG P Sbjct: 959 PPSKIIQLTPVPVSTPSGLVPPLGPATLPGPTSQPQKVLLP--SSTRITYVQSAGGHALP 1016 Query: 428 IAELTAAFE--MVDSISPT 478 + A+ + V S PT Sbjct: 1017 LGTSPASSQAGTVTSYGPT 1035
>sp|Q5K8D3|ATG1_CRYNE Serine/threonine-protein kinase ATG1 (Autophagy-related protein 1) Length = 988 Score = 32.0 bits (71), Expect = 2.0 Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 4/109 (3%) Frame = +2 Query: 98 AVMQTNPEIILREQTVQIPRSSLISNPS--SPGRISTPQAFVGSPTDARRSA--PPAGSV 265 A + P + + T + RS L + PS +P R STP+ +VG T + +A PP+ S Sbjct: 398 AALNPQPAVPISRDTSE-GRSRLSTPPSRPTPTRRSTPKYYVGDATPSEPTAIIPPSPSS 456 Query: 266 QVLPIVSGVRSSYVPPQDPPRVGQASSTLRQQILPVLKDLEAVYSRVAG 412 P DP Q S T R P++ + R++G Sbjct: 457 APTP---------TSAPDPGLTTQQSPTSRANPRPIITAASSAQRRMSG 496
>sp|P46493|THD1_HAEIN Threonine dehydratase biosynthetic (Threonine deaminase) Length = 513 Score = 31.6 bits (70), Expect = 2.6 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = +2 Query: 299 SYVPPQDPPRVGQASSTLRQQILPVLKDLEAVYSRVAGG 415 +++PP D P V TL ++L + DL+ V+ +V GG Sbjct: 153 TFIPPFDHPLVIAGQGTLAMEMLQQVADLDYVFVQVGGG 191
>sp|Q09277|YPX5_CAEEL Hypothetical protein F40H6.5 in chromosome III Length = 1216 Score = 31.6 bits (70), Expect = 2.6 Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 23/118 (19%) Frame = +2 Query: 53 GTFKWNFDTVKAS----------------GAAVMQTNPEIILREQTVQIPRSSLISNPSS 184 G +WN DTVK + A+ Q+ P L T IP +S I S+ Sbjct: 801 GYQQWNIDTVKMNCARSHTTTVEPSTPLETASTSQSTPSATLTSTTENIPSTSKIPETST 860 Query: 185 PGRISTPQAFVG-----SPTDARRSAPPAGSVQVLPIVSGV--RSSYVPPQDPPRVGQ 337 R ++P G S T++ ++P + LP + S+ +P D +GQ Sbjct: 861 TQRPTSPILTSGATSTSSSTESTTTSPTTSTTTTLPPTTTPYNLSAPIPKLDCNTIGQ 918
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,434,336
Number of Sequences: 369166
Number of extensions: 2062779
Number of successful extensions: 7200
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7191
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7454154400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
