DrC_00496
- Cluster detail
- GO Category : Not Available
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00496 (899 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q9NUQ9|FA49B_HUMAN Protein FAM49B (L1) 185 1e-46 sp|Q921M7|FA49B_MOUSE Protein FAM49B 184 3e-46 sp|Q9H0Q0|FA49A_HUMAN Protein FAM49A 177 4e-44 sp|Q8BHZ0|FA49A_MOUSE Protein FAM49A 177 4e-44 sp|P52891|NUP84_YEAST Nucleoporin NUP84 (Nuclear pore prote... 33 0.83 sp|P38995|ATU2_YEAST Probable copper-transporting ATPase (C... 31 4.1 sp|Q15569|TESK1_HUMAN Dual specificity testis-specific prot... 30 9.2 sp|Q03824|YM37_YEAST Hypothetical 81.5 kDa protein in HLJ1-... 30 9.2
>sp|Q9NUQ9|FA49B_HUMAN Protein FAM49B (L1) Length = 324 Score = 185 bits (470), Expect = 1e-46 Identities = 98/210 (46%), Positives = 141/210 (67%), Gaps = 1/210 (0%) Frame = +2 Query: 2 SINEHLESKQATFKQFADILDFILKFDSLKMMSPSIQNDLXXXXXXXXXXXTYGQDVIAK 181 S +HLE +QA KQFA+IL F L+FD LKM +P+IQND +V A+ Sbjct: 117 SPTQHLEREQALAKQFAEILHFTLRFDELKMTNPAIQNDFSYYRRTLSRMRI--NNVPAE 174 Query: 182 -EDTVTDEVCGNMSLFYAESTPMLKLITRSISKWRAEDVSVPIETTTECLATMAKICRGI 358 E+ V +E+ MSLFYAE+TPMLK ++ + +K+ +E+ ++PIE TT+CL+TMA +CR + Sbjct: 175 GENEVNNELANRMSLFYAEATPMLKTLSDATTKFVSENKNLPIENTTDCLSTMASVCRVM 234 Query: 359 VANPELQHRLITPPDTVMLCLRVMTAVIIIYDLLDPNGVFKRTSKIDIKACLKILKEQGL 538 + PE + R T +TV CLRVM VII+YD + P G F +TSKID+K C+K+LK+Q Sbjct: 235 LETPEYRSRF-TNEETVSFCLRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKDQPP 293 Query: 539 HQTSPLFSAIRFSTVHFNDETTPRNIKSLI 628 + L +A+R++T H NDETT + IKS++ Sbjct: 294 NSVEGLLNALRYTTKHLNDETTSKQIKSML 323
>sp|Q921M7|FA49B_MOUSE Protein FAM49B Length = 324 Score = 184 bits (467), Expect = 3e-46 Identities = 97/210 (46%), Positives = 141/210 (67%), Gaps = 1/210 (0%) Frame = +2 Query: 2 SINEHLESKQATFKQFADILDFILKFDSLKMMSPSIQNDLXXXXXXXXXXXTYGQDVIAK 181 S +HLE +QA KQFA+IL F L+FD LKM +P+IQND +V A+ Sbjct: 117 SPTQHLEREQALAKQFAEILHFTLRFDELKMTNPAIQNDFSYYRRTLSRMRI--NNVPAE 174 Query: 182 -EDTVTDEVCGNMSLFYAESTPMLKLITRSISKWRAEDVSVPIETTTECLATMAKICRGI 358 E+ V +E+ MSLFYAE+TPMLK ++ + +K+ +E+ ++PIE TT+CL+TMA +CR + Sbjct: 175 GENEVNNELANRMSLFYAEATPMLKTLSDATTKFVSENKNLPIENTTDCLSTMASVCRVM 234 Query: 359 VANPELQHRLITPPDTVMLCLRVMTAVIIIYDLLDPNGVFKRTSKIDIKACLKILKEQGL 538 + PE + R T +TV CLRVM VII+YD + P G F +TSKID+K C+K+LK+Q Sbjct: 235 LETPEYRSRF-TNEETVSFCLRVMVGVIILYDHVHPVGAFAKTSKIDMKGCIKVLKDQPP 293 Query: 539 HQTSPLFSAIRFSTVHFNDETTPRNIKSLI 628 + L +A+R++T H NDETT + I+S++ Sbjct: 294 NSVEGLLNALRYTTKHLNDETTSKQIRSML 323
>sp|Q9H0Q0|FA49A_HUMAN Protein FAM49A Length = 323 Score = 177 bits (449), Expect = 4e-44 Identities = 89/206 (43%), Positives = 134/206 (65%) Frame = +2 Query: 11 EHLESKQATFKQFADILDFILKFDSLKMMSPSIQNDLXXXXXXXXXXXTYGQDVIAKEDT 190 +HLE +QA K+FA+IL F L+FD LKM +P+IQND + E+ Sbjct: 119 QHLEREQALAKEFAEILHFTLRFDELKMRNPAIQNDFSYYRRTISRNRINNMHLDI-ENE 177 Query: 191 VTDEVCGNMSLFYAESTPMLKLITRSISKWRAEDVSVPIETTTECLATMAKICRGIVANP 370 V +E+ MSLFYAE+TPMLK ++ + + +E+ ++PIE TT+CL+TM +C+ ++ P Sbjct: 178 VNNEMANRMSLFYAEATPMLKTLSNATMHFVSENKTLPIENTTDCLSTMTSVCKVMLETP 237 Query: 371 ELQHRLITPPDTVMLCLRVMTAVIIIYDLLDPNGVFKRTSKIDIKACLKILKEQGLHQTS 550 E + R T +T+M C+RVM VII+YD + P G F +TSKID+K C+K+LKEQ Sbjct: 238 EYRSRF-TSEETLMFCMRVMVGVIILYDHVHPVGAFCKTSKIDMKGCIKVLKEQAPDSVE 296 Query: 551 PLFSAIRFSTVHFNDETTPRNIKSLI 628 L +A+RF+T H NDE+T + I++++ Sbjct: 297 GLLNALRFTTKHLNDESTSKQIRAML 322
>sp|Q8BHZ0|FA49A_MOUSE Protein FAM49A Length = 323 Score = 177 bits (449), Expect = 4e-44 Identities = 89/206 (43%), Positives = 134/206 (65%) Frame = +2 Query: 11 EHLESKQATFKQFADILDFILKFDSLKMMSPSIQNDLXXXXXXXXXXXTYGQDVIAKEDT 190 +HLE +QA K+FA+IL F L+FD LKM +P+IQND + E+ Sbjct: 119 QHLEREQALAKEFAEILHFTLRFDELKMRNPAIQNDFSYYRRTISRNRINNMHLDI-ENE 177 Query: 191 VTDEVCGNMSLFYAESTPMLKLITRSISKWRAEDVSVPIETTTECLATMAKICRGIVANP 370 V +E+ MSLFYAE+TPMLK ++ + + +E+ ++PIE TT+CL+TM +C+ ++ P Sbjct: 178 VNNEMANRMSLFYAEATPMLKTLSNATMHFVSENKTLPIENTTDCLSTMTSVCKVMLETP 237 Query: 371 ELQHRLITPPDTVMLCLRVMTAVIIIYDLLDPNGVFKRTSKIDIKACLKILKEQGLHQTS 550 E + R T +T+M C+RVM VII+YD + P G F +TSKID+K C+K+LKEQ Sbjct: 238 EYRSRF-TSEETLMFCMRVMVGVIILYDHVHPVGAFCKTSKIDMKGCIKVLKEQAPDSVE 296 Query: 551 PLFSAIRFSTVHFNDETTPRNIKSLI 628 L +A+RF+T H NDE+T + I++++ Sbjct: 297 GLLNALRFTTKHLNDESTSKQIRAML 322
>sp|P52891|NUP84_YEAST Nucleoporin NUP84 (Nuclear pore protein NUP84) Length = 726 Score = 33.5 bits (75), Expect = 0.83 Identities = 20/89 (22%), Positives = 44/89 (49%) Frame = +2 Query: 296 SVPIETTTECLATMAKICRGIVANPELQHRLITPPDTVMLCLRVMTAVIIIYDLLDPNGV 475 SV +++ + + ++ +V E + +I P LR++T + I D+++P V Sbjct: 349 SVILDSLPSVIHSSVEMLLDVVKGTEASNDIIDKP----YLLRIVTHLAICLDIINPGSV 404 Query: 476 FKRTSKIDIKACLKILKEQGLHQTSPLFS 562 + I + +LK QGL++ P+++ Sbjct: 405 EEVDKSKLITTYISLLKLQGLYENIPIYA 433
>sp|P38995|ATU2_YEAST Probable copper-transporting ATPase (Cu(2+)-ATPase) Length = 1004 Score = 31.2 bits (69), Expect = 4.1 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 12/98 (12%) Frame = -3 Query: 441 ITAVMTRKHNITVSGGVINLCCNSGFATIPRQILAIVAKHSVVVSI------------GT 298 ITA+ T++ ++V G + C S +T+ +Q+ I SVVVS+ T Sbjct: 74 ITAISTKEGLLSVQG----MTCGSCVSTVTKQVEGIEGVESVVVSLVTEECHVIYEPSKT 129 Query: 297 LTSSARHFEIDLVINFNIGVDSA*NSDIFPHTSSVTVS 184 +AR D + NI +D N+D+ T + V+ Sbjct: 130 TLETAREMIEDCGFDSNIIMDGNGNADMTEKTVILKVT 167
>sp|Q15569|TESK1_HUMAN Dual specificity testis-specific protein kinase 1 (Testicular protein kinase 1) Length = 626 Score = 30.0 bits (66), Expect = 9.2 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Frame = +2 Query: 209 GNMSLFYAESTPMLKLITRSISKWRAEDVSVPIETTTECLA---TMAKICRGIVANPELQ 379 G + L S P+L L+ S +P+ TT E L T A+ CR + ++PEL Sbjct: 390 GKIKLLDTPSKPVLPLVPPS----PFPSTQLPLVTTPETLVQPGTPARRCRSLPSSPELP 445 Query: 380 HRLIT 394 R+ T Sbjct: 446 RRMET 450
>sp|Q03824|YM37_YEAST Hypothetical 81.5 kDa protein in HLJ1-SMP2 intergenic region Length = 705 Score = 30.0 bits (66), Expect = 9.2 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = -3 Query: 693 SKYIKSIVYFTSNLIFYAVASIIKDLIFLGVVSSL 589 S IK ++ F+S+ +FY + SII D++ S L Sbjct: 292 SSVIKELLVFSSDALFYKLKSIIPDIVIFSDTSEL 326
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,377,908
Number of Sequences: 369166
Number of extensions: 1773863
Number of successful extensions: 4487
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4479
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9078450570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
