Planaria EST Database

DrC_00227

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00227
         (1146 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9DC61|MPPA_MOUSE  Mitochondrial processing peptidase alp...   138   3e-32
sp|Q10713|MPPA_HUMAN  Mitochondrial processing peptidase alp...   137   8e-32
sp|P20069|MPPA_RAT  Mitochondrial processing peptidase alpha...   117   5e-26
sp|O94745|MPPA_SCHPO  Probable mitochondrial processing pept...   114   4e-25
sp|P23955|MPPA_NEUCR  Mitochondrial processing peptidase alp...   112   2e-24
sp|P97997|MPPA_BLAEM  Mitochondrial processing peptidase alp...   112   3e-24
sp|P11914|MPPA_YEAST  Mitochondrial processing peptidase alp...   109   1e-23
sp|Q9ZU25|MPPA1_ARATH  Probable mitochondrial processing pep...    97   1e-19
sp|P29677|MPPA_SOLTU  Mitochondrial processing peptidase alp...    94   7e-19
sp|O04308|MPPA2_ARATH  Probable mitochondrial processing pep...    86   2e-16

>sp|Q9DC61|MPPA_MOUSE Mitochondrial processing peptidase alpha subunit, mitochondrial
            precursor (Alpha-MPP) (P-55)
          Length = 524

 Score =  138 bits (347), Expect = 3e-32
 Identities = 75/225 (33%), Positives = 118/225 (52%), Gaps = 3/225 (1%)
 Frame = +3

Query: 393  MEQDLSQYH---DPMPEFAHVSIALESCGVKDPQFVHACLLQTLMXXXXXXXXXXXXXXM 563
            +E+D+S       P+PE  H+ + LESC   +  F+   +L  +M              M
Sbjct: 299  VERDMSNVSLGPTPIPELTHIMVGLESCSFLEDDFIPFAVLNMMMGGGGSFSAGGPGKGM 358

Query: 564  FSRLYKEVLHKYPWVNSVVAMNHSYSDTGLFTITGSSVPGNLDTLALVLAHQLKNMVKSI 743
            FSRLY  VL+++ W+ +  + +HSY DTGL  I  S+ P  +  +  ++  +   M +++
Sbjct: 359  FSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTV 418

Query: 744  DKEDFARAKCQLKSMLLMNLETRAVVFEDIGRQVIYQGHRNSADYWVEQIDKATEQEVRD 923
            D  +  RAK QL SML+MNLE+R V+FED+GRQV+    R         I     ++++ 
Sbjct: 419  DLVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKR 478

Query: 924  FAQRMLLSRPAIAGFGKLEKLQSLEVITKLLEISEGFIPKSFRKF 1058
             A +ML  +PA+A  G L  L + E I   L    G +P+S+R F
Sbjct: 479  VASKMLRGKPAVAALGDLTDLPTYEHIQAALSSRNGHLPRSYRLF 523


 Score = 98.2 bits (243), Expect = 4e-20
 Identities = 43/86 (50%), Positives = 65/86 (75%)
 Frame = +1

Query: 151 DTRITKLSNGLTVASQNQFGVQCTLGIMVKCAPRYEARHISGVSHFIEKLAFQATEDFQS 330
           +T++T L NGL VASQN+FG  CT+GI++    RYEA+++SG++HF+EKLAF +T  F S
Sbjct: 65  ETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTARFDS 124

Query: 331 KNDIQIVLDESGSIYDCQLARWSKIY 408
           K++I + L++ G I DCQ +R + +Y
Sbjct: 125 KDEILLTLEKHGGICDCQTSRDTTMY 150

>sp|Q10713|MPPA_HUMAN Mitochondrial processing peptidase alpha subunit, mitochondrial
            precursor (Alpha-MPP) (P-55) (HA1523)
          Length = 525

 Score =  137 bits (344), Expect = 8e-32
 Identities = 75/225 (33%), Positives = 118/225 (52%), Gaps = 3/225 (1%)
 Frame = +3

Query: 393  MEQDLSQYH---DPMPEFAHVSIALESCGVKDPQFVHACLLQTLMXXXXXXXXXXXXXXM 563
            +E+D+S       P+PE  H+ + LESC   +  F+   +L  +M              M
Sbjct: 300  LERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGM 359

Query: 564  FSRLYKEVLHKYPWVNSVVAMNHSYSDTGLFTITGSSVPGNLDTLALVLAHQLKNMVKSI 743
            FSRLY  VL+++ W+ +  + +HSY DTGL  I  S+ P  +  +  ++  +   M  ++
Sbjct: 360  FSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTV 419

Query: 744  DKEDFARAKCQLKSMLLMNLETRAVVFEDIGRQVIYQGHRNSADYWVEQIDKATEQEVRD 923
            D  +  RAK QL SML+MNLE+R V+FED+GRQV+    R         I     ++V+ 
Sbjct: 420  DTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKR 479

Query: 924  FAQRMLLSRPAIAGFGKLEKLQSLEVITKLLEISEGFIPKSFRKF 1058
             A +ML  +PA+A  G L  L + E I   L   +G +P+++R F
Sbjct: 480  VASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLF 524


 Score = 98.2 bits (243), Expect = 4e-20
 Identities = 43/86 (50%), Positives = 65/86 (75%)
 Frame = +1

Query: 151 DTRITKLSNGLTVASQNQFGVQCTLGIMVKCAPRYEARHISGVSHFIEKLAFQATEDFQS 330
           +T++T L NGL VASQN+FG  CT+GI++    RYEA+++SG++HF+EKLAF +T  F S
Sbjct: 66  ETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTARFDS 125

Query: 331 KNDIQIVLDESGSIYDCQLARWSKIY 408
           K++I + L++ G I DCQ +R + +Y
Sbjct: 126 KDEILLTLEKHGGICDCQTSRDTTMY 151

>sp|P20069|MPPA_RAT Mitochondrial processing peptidase alpha subunit, mitochondrial
            precursor (Alpha-MPP) (P-55)
          Length = 524

 Score =  117 bits (294), Expect = 5e-26
 Identities = 66/218 (30%), Positives = 110/218 (50%)
 Frame = +3

Query: 405  LSQYHDPMPEFAHVSIALESCGVKDPQFVHACLLQTLMXXXXXXXXXXXXXXMFSRLYKE 584
            +S    P  + +H+        + +  F+   +L  +M              MFSRLY  
Sbjct: 306  MSALRPPRFQSSHIYGGARELLLLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLN 365

Query: 585  VLHKYPWVNSVVAMNHSYSDTGLFTITGSSVPGNLDTLALVLAHQLKNMVKSIDKEDFAR 764
            VL+++ W+ +  + +HSY DTGL  I  S+ P  +  +  ++  +   M +++D  +  R
Sbjct: 366  VLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTVDLVELER 425

Query: 765  AKCQLKSMLLMNLETRAVVFEDIGRQVIYQGHRNSADYWVEQIDKATEQEVRDFAQRMLL 944
            AK QL SML+MNLE+R V+FED+GRQV+    R         I     ++++  A +ML 
Sbjct: 426  AKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDIKRVASKMLR 485

Query: 945  SRPAIAGFGKLEKLQSLEVITKLLEISEGFIPKSFRKF 1058
             +PA+A  G L  L + E I   L   +G +P+++R F
Sbjct: 486  GKPAVAALGDLTDLPTYEHIQAALSSRDGRLPRTYRLF 523


 Score = 99.4 bits (246), Expect = 2e-20
 Identities = 44/86 (51%), Positives = 65/86 (75%)
 Frame = +1

Query: 151 DTRITKLSNGLTVASQNQFGVQCTLGIMVKCAPRYEARHISGVSHFIEKLAFQATEDFQS 330
           +T++T L NGL VASQN+FG  CTLGI++    RYEA+++SG++HF+EKLAF +T  F S
Sbjct: 65  ETKVTTLDNGLRVASQNKFGQFCTLGILINSGSRYEAKYLSGIAHFLEKLAFSSTARFDS 124

Query: 331 KNDIQIVLDESGSIYDCQLARWSKIY 408
           K++I + L++ G I DCQ +R + +Y
Sbjct: 125 KDEILLTLEKHGGICDCQTSRDTTMY 150

>sp|O94745|MPPA_SCHPO Probable mitochondrial processing peptidase alpha subunit,
           mitochondrial precursor (Alpha-MPP)
          Length = 494

 Score =  114 bits (286), Expect = 4e-25
 Identities = 71/187 (37%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
 Frame = +3

Query: 423 PMP---EFAHVSIALESCGVKDPQFVHACLLQTLMXXXXXXXXXXXXXXMFSRLYKEVLH 593
           P+P   EF HV IA+E   V DP       LQ L+              M+SRLY  VL+
Sbjct: 279 PVPYQQEFTHVVIAMEGLPVTDPDIYALACLQFLLGGGGSFSAGGPGKGMYSRLYLNVLN 338

Query: 594 KYPWVNSVVAMNHSYSDTGLFTITGSSVPGNLDTLALVLAHQLKNMVKSIDKEDFARAKC 773
           +YPWV + +A NHSY+D+GLF +  + +       A ++  +L N V S+  E+  RAK 
Sbjct: 339 QYPWVETCMAFNHSYTDSGLFGMFVTILDDAAHLAAPLIIRELCNTVLSVTSEETERAKN 398

Query: 774 QLKSMLLMNLETRAVVFEDIGRQVIYQ-GHRNSADYWVEQIDKATEQEVRDFAQRMLLSR 950
           QLKS LLMNLE+R +  ED+GRQ+  Q G   +    +E+ID  T  ++   A+R+L   
Sbjct: 399 QLKSSLLMNLESRMISLEDLGRQIQTQNGLYITPKEMIEKIDALTPSDLSRVARRVLTGN 458

Query: 951 PAIAGFG 971
            +  G G
Sbjct: 459 VSNPGNG 465


 Score = 62.0 bits (149), Expect = 3e-09
 Identities = 35/86 (40%), Positives = 48/86 (55%)
 Frame = +1

Query: 151 DTRITKLSNGLTVASQNQFGVQCTLGIMVKCAPRYEARHISGVSHFIEKLAFQATEDFQS 330
           + R  KL NG+T     + G    LG+ VK   RYE +  SGVSHF+++LAFQATE    
Sbjct: 45  EVRTEKLKNGVTYVCDPRPGHFSGLGVYVKAGSRYETKKFSGVSHFMDRLAFQATER-TP 103

Query: 331 KNDIQIVLDESGSIYDCQLARWSKIY 408
             +++  L+  G  Y C  +R S IY
Sbjct: 104 VGEMKAKLENLGGNYMCSTSRESMIY 129

>sp|P23955|MPPA_NEUCR Mitochondrial processing peptidase alpha subunit, mitochondrial
           precursor (Alpha-MPP)
          Length = 577

 Score =  112 bits (280), Expect = 2e-24
 Identities = 65/187 (34%), Positives = 98/187 (52%), Gaps = 5/187 (2%)
 Frame = +3

Query: 426 MPEFAHVSIALESCGVKDPQFVHACLLQTLMXXXXXXXXXXXXXXMFSRLYKEVLHKYPW 605
           +P F H+ +A E   + D        LQTL+              M+SRLY  VL+++ W
Sbjct: 353 LPTFTHIQLAFEGLAISDDDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTNVLNQHGW 412

Query: 606 VNSVVAMNHSYSDTGLFTITGSSVPGNLDTLALVLAHQLKNMV-----KSIDKEDFARAK 770
           V S VA NHSY+D+GLF I  S  PG    +  V+  +L  +       ++ + + +RAK
Sbjct: 413 VESCVAFNHSYTDSGLFGIAASCYPGRTLPMLQVMCRELHALTTDHGYSALGELEVSRAK 472

Query: 771 CQLKSMLLMNLETRAVVFEDIGRQVIYQGHRNSADYWVEQIDKATEQEVRDFAQRMLLSR 950
            QL+S LLMNLE+R V  ED+GRQV   G +        +I++ T +++R  A+R++   
Sbjct: 473 NQLRSSLLMNLESRMVELEDLGRQVQVHGRKIPVREMTRRINELTVKDLRRVAKRVVGGM 532

Query: 951 PAIAGFG 971
              AG G
Sbjct: 533 ANNAGQG 539


 Score = 47.8 bits (112), Expect = 6e-05
 Identities = 25/83 (30%), Positives = 48/83 (57%)
 Frame = +1

Query: 160 ITKLSNGLTVASQNQFGVQCTLGIMVKCAPRYEARHISGVSHFIEKLAFQATEDFQSKND 339
           IT LSNG+ VAS++       +G+ +    RYE  ++ G SH +++LAF++T   ++ ++
Sbjct: 54  ITTLSNGVRVASEDLPDAFSGVGVYIDAGSRYENDYVRGASHIMDRLAFKSTST-RTADE 112

Query: 340 IQIVLDESGSIYDCQLARWSKIY 408
           +   +++ G    C  +R S +Y
Sbjct: 113 MLETVEKLGGNIQCASSRESMMY 135

>sp|P97997|MPPA_BLAEM Mitochondrial processing peptidase alpha subunit, mitochondrial
            precursor (Alpha-MPP)
          Length = 474

 Score =  112 bits (279), Expect = 3e-24
 Identities = 70/196 (35%), Positives = 95/196 (48%)
 Frame = +3

Query: 441  HVSIALESCGVKDPQFVHACLLQTLMXXXXXXXXXXXXXXMFSRLYKEVLHKYPWVNSVV 620
            HV +A        P       LQ LM              M+SRLY  VL++Y W+ S  
Sbjct: 261  HVQVAFPVPPFTHPDMFPVSTLQVLMGGGGAFSAGGPGKGMYSRLYTNVLNRYRWMESCA 320

Query: 621  AMNHSYSDTGLFTITGSSVPGNLDTLALVLAHQLKNMVKSIDKEDFARAKCQLKSMLLMN 800
            A  H+YS T LF I+ S VP     L  VLA +  +M +++  E+ ARAK QLKS LLMN
Sbjct: 321  AFQHAYSSTSLFGISASCVPSFNPHLCNVLAGEFVHMARNLSDEEVARAKNQLKSSLLMN 380

Query: 801  LETRAVVFEDIGRQVIYQGHRNSADYWVEQIDKATEQEVRDFAQRMLLSRPAIAGFGKLE 980
            LE++ +  EDIGRQV+ Q  R      V  I   T  ++   A+ ++   P +   G   
Sbjct: 381  LESQVITVEDIGRQVLAQNQRLEPLELVNNISAVTRDDLVRVAEALVAKPPTMVAVG--- 437

Query: 981  KLQSLEVITKLLEISE 1028
                 E +TKL +I E
Sbjct: 438  -----EDLTKLTDIKE 448


 Score = 44.3 bits (103), Expect = 7e-04
 Identities = 27/94 (28%), Positives = 44/94 (46%)
 Frame = +1

Query: 127 QFNKIKDMDTRITKLSNGLTVASQNQFGVQCTLGIMVKCAPRYEARHISGVSHFIEKLAF 306
           Q  K     T +T+L +G+ VA+         +G+ V   P YE     GVSHF+  LAF
Sbjct: 6   QLAKAAARSTCMTRLPSGIRVATAPSNSHFAAVGVYVDAGPIYETSIDRGVSHFVSSLAF 65

Query: 307 QATEDFQSKNDIQIVLDESGSIYDCQLARWSKIY 408
           ++T        ++ +    G+++ C   R S +Y
Sbjct: 66  KSTHGATESQVLKTMAGLGGNLF-CTATRESILY 98

>sp|P11914|MPPA_YEAST Mitochondrial processing peptidase alpha subunit, mitochondrial
           precursor (Alpha-MPP)
          Length = 482

 Score =  109 bits (273), Expect = 1e-23
 Identities = 64/187 (34%), Positives = 97/187 (51%), Gaps = 4/187 (2%)
 Frame = +3

Query: 426 MPEFAHVSIALESCGVKDPQFVHACLLQTLMXXXXXXXXXXXXXXMFSRLYKEVLHKYPW 605
           +PE  H+ I  E   +  P       LQTL+              M+SRLY  VL++Y +
Sbjct: 253 LPELFHIQIGFEGLPIDHPDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTHVLNQYYF 312

Query: 606 VNSVVAMNHSYSDTGLFTITGSSVPGNLDTLALVLAHQLKNMVKSID----KEDFARAKC 773
           V + VA NHSYSD+G+F I+ S +P        V+A Q+ N   + D    +++ +RAK 
Sbjct: 313 VENCVAFNHSYSDSGIFGISLSCIPQAAPQAVEVIAQQMYNTFANKDLRLTEDEVSRAKN 372

Query: 774 QLKSMLLMNLETRAVVFEDIGRQVIYQGHRNSADYWVEQIDKATEQEVRDFAQRMLLSRP 953
           QLKS LLMNLE++ V  ED+GRQV+  G +   +  + +I+     ++   A+ +     
Sbjct: 373 QLKSSLLMNLESKLVELEDMGRQVLMHGRKIPVNEMISKIEDLKPDDISRVAEMIFTGNV 432

Query: 954 AIAGFGK 974
             AG GK
Sbjct: 433 NNAGNGK 439


 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 26/84 (30%), Positives = 49/84 (58%)
 Frame = +1

Query: 157 RITKLSNGLTVASQNQFGVQCTLGIMVKCAPRYEARHISGVSHFIEKLAFQATEDFQSKN 336
           +++ L+NGL VA+ N  G    LG+ +    R+E R++ G +H +++LAF++TE  + + 
Sbjct: 20  KLSSLANGLKVATSNTPGHFSALGLYIDAGSRFEGRNLKGCTHILDRLAFKSTEHVEGRA 79

Query: 337 DIQIVLDESGSIYDCQLARWSKIY 408
             +  L+  G  Y C  +R + +Y
Sbjct: 80  MAE-TLELLGGNYQCTSSRENLMY 102

>sp|Q9ZU25|MPPA1_ARATH Probable mitochondrial processing peptidase alpha subunit 1,
            mitochondrial precursor (Alpha-MPP 1)
          Length = 503

 Score = 96.7 bits (239), Expect = 1e-19
 Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 2/194 (1%)
 Frame = +3

Query: 432  EFAHVSIALESCGVK-DPQFVHACLLQTLMXXXXXXXXXXXXXXMFSRLYKEVLHKYPWV 608
            E  H ++A E  G   + + V A +LQ LM              M S LY+ VL++Y  V
Sbjct: 306  EATHFAVAFEVPGWNNEKEAVTATVLQMLMGGGGSFSAGGPGKGMHSWLYRRVLNEYQEV 365

Query: 609  NSVVAMNHSYSDTGLFTITGSSVPGNLDTLALVLAHQLKNMVKS-IDKEDFARAKCQLKS 785
             S  A    ++DTGLF I G S P        + A +LK++    +++    RAK   KS
Sbjct: 366  QSCTAFTSIFNDTGLFGIYGCSSPQFAAKAIELAAKELKDVAGGKVNQAHLDRAKAATKS 425

Query: 786  MLLMNLETRAVVFEDIGRQVIYQGHRNSADYWVEQIDKATEQEVRDFAQRMLLSRPAIAG 965
             +LMNLE+R +  EDIGRQ++  G R   D +++ +D+ T +++ DF  +++     +  
Sbjct: 426  AVLMNLESRMIAAEDIGRQILTYGERKPVDQFLKSVDQLTLKDIADFTSKVISKPLTMGS 485

Query: 966  FGKLEKLQSLEVIT 1007
            FG +  + S + I+
Sbjct: 486  FGDVLAVPSYDTIS 499


 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
 Frame = +1

Query: 91  NLSFPLQFSR--PNQFNKIKDMDTRITKLSNGLTVASQNQFGVQCTLGIMVKCAPRYEAR 264
           +L  PLQ     P   +K++    +IT L NGL +AS+       ++G+ V C   YEA 
Sbjct: 55  SLDMPLQGVSLPPPLADKVEPSKLQITTLPNGLKIASETTPNPAASIGLYVDCGSIYEAP 114

Query: 265 HISGVSHFIEKLAFQAT 315
           +  G +H +E++AF++T
Sbjct: 115 YFHGATHLLERMAFKST 131

>sp|P29677|MPPA_SOLTU Mitochondrial processing peptidase alpha subunit, mitochondrial
            precursor (Alpha-MPP) (Ubiquinol-cytochrome-c reductase
            subunit II)
          Length = 504

 Score = 94.0 bits (232), Expect = 7e-19
 Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 4/196 (2%)
 Frame = +3

Query: 432  EFAHVSIALESCG--VKDPQFVHACLLQTLMXXXXXXXXXXXXXXMFSRLYKEVLHKYPW 605
            E  H ++A E  G  + + + +   +LQ LM              M+SRLY  VL++YP 
Sbjct: 303  EMTHFALAFEVPGGWMSEKESMTLTVLQMLMGGGGSFSAGGPGKGMYSRLYLRVLNQYPQ 362

Query: 606  VNSVVAMNHSYSDTGLFTITGSSVPGNLDTLALVLAHQLKNMVK--SIDKEDFARAKCQL 779
            +++  A +  Y++TGLF I G++          V   +L  +     +D+    RAK   
Sbjct: 363  IHAFSAFSSIYNNTGLFGIQGTTSSDFGPQAVDVAVKELIAVANPSEVDQVQLNRAKQAT 422

Query: 780  KSMLLMNLETRAVVFEDIGRQVIYQGHRNSADYWVEQIDKATEQEVRDFAQRMLLSRPAI 959
            KS +LMNLE+R V  EDIGRQ++  G RN  +++++ ID  + +++    Q+++ S   +
Sbjct: 423  KSAILMNLESRMVASEDIGRQLLTYGERNPVEHFLKAIDAVSAKDIASVVQKLISSPLTM 482

Query: 960  AGFGKLEKLQSLEVIT 1007
            A +G +  L S + ++
Sbjct: 483  ASYGDVLSLPSYDAVS 498


 Score = 47.4 bits (111), Expect = 8e-05
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
 Frame = +1

Query: 94  LSFPLQFSR--PNQFNKIKDMDTRITKLSNGLTVASQNQFGVQCTLGIMVKCAPRYEARH 267
           L FPL   +  P   + ++   T+IT L+NGL VAS+       ++G+ V C   YE   
Sbjct: 53  LDFPLNDVKLSPPLPDYVEPAKTQITTLANGLKVASEASVNPAASIGLYVDCGSIYETPA 112

Query: 268 ISGVSHFIEKLAFQAT 315
             G +H +E++AF++T
Sbjct: 113 SYGATHLLERMAFKST 128

>sp|O04308|MPPA2_ARATH Probable mitochondrial processing peptidase alpha subunit 2,
            mitochondrial precursor (Alpha-MPP 2)
          Length = 499

 Score = 86.3 bits (212), Expect = 2e-16
 Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 2/195 (1%)
 Frame = +3

Query: 432  EFAHVSIALESCGVK-DPQFVHACLLQTLMXXXXXXXXXXXXXXMFSRLYKEVLHKYPWV 608
            E  H ++A E  G   + + + A +LQ LM              M S LY  +L+++   
Sbjct: 302  EATHFALAFEVPGWNNEKEAIIATVLQMLMGGGGSFSAGGPGKGMHSWLYLRLLNQHQQF 361

Query: 609  NSVVAMNHSYSDTGLFTITGSSVPGNLDTLALVLAHQLKNMVKS-IDKEDFARAKCQLKS 785
             S  A    +++TGLF I G + P        ++A ++  +    ++++   RAK   KS
Sbjct: 362  QSCTAFTSVFNNTGLFGIYGCTSPEFASQGIELVASEMNAVADGKVNQKHLDRAKAATKS 421

Query: 786  MLLMNLETRAVVFEDIGRQVIYQGHRNSADYWVEQIDKATEQEVRDFAQRMLLSRPAIAG 965
             +LMNLE+R +  EDIGRQ++  G R   D +++ +D+ T +++ DF  +++     +A 
Sbjct: 422  AILMNLESRMIAAEDIGRQILTYGERKPVDQFLKTVDQLTLKDIADFTSKVITKPLTMAT 481

Query: 966  FGKLEKLQSLEVITK 1010
            FG +  + S + ++K
Sbjct: 482  FGDVLNVPSYDSVSK 496


 Score = 43.5 bits (101), Expect = 0.001
 Identities = 19/65 (29%), Positives = 35/65 (53%)
 Frame = +1

Query: 121 PNQFNKIKDMDTRITKLSNGLTVASQNQFGVQCTLGIMVKCAPRYEARHISGVSHFIEKL 300
           P   + ++    + T L NGLT+A++       ++G+ V C   YE     G +H +E++
Sbjct: 63  PPLSDHVEPSKLKTTTLPNGLTIATEMSPNPAASIGLYVDCGSIYETPQFRGATHLLERM 122

Query: 301 AFQAT 315
           AF++T
Sbjct: 123 AFKST 127

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,318,783
Number of Sequences: 369166
Number of extensions: 2371553
Number of successful extensions: 5764
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5742
length of database: 68,354,980
effective HSP length: 112
effective length of database: 47,664,660
effective search space used: 12821793540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00227

  1. Dr_sW_006_J06
  2. Dr_sW_007_M07