Planaria EST Database

DrC_00137

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00137
         (440 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P28799|GRN_HUMAN  Granulins precursor (Proepithelin) (PEP...    66   4e-11
sp|P23785|GRN_RAT  Granulins precursor [Contains: Acrogranin...    65   7e-11
sp|P28798|GRN_MOUSE  Granulins precursor (Acrogranin) (Proep...    62   4e-10
sp|P28797|GRN_CAVPO  Granulins precursor (Proepithelin) (PEP...    61   1e-09
sp|P81015|GRN3_CYPCA  Granulin-3                                   54   1e-07
sp|P81014|GRN2_CYPCA  Granulin-2                                   54   1e-07
sp|P81013|GRN1_CYPCA  Granulin-1                                   54   2e-07
sp|P80930|ENA1_HORSE  Antimicrobial peptide eNAP-1                 52   7e-07
sp|P80059|PMD1_LOCMI  Pars intercerebralis major peptide D1 ...    51   1e-06
sp|P25776|ORYA_ORYSA  Oryzain alpha chain precursor                46   3e-05

>sp|P28799|GRN_HUMAN Granulins precursor (Proepithelin) (PEPI) [Contains: Acrogranin;
           Paragranulin; Granulin-1 (Granulin G); Granulin-2
           (Granulin F); Granulin-3 (Granulin B); Granulin-4
           (Granulin A); Granulin-5 (Granulin C); Granulin-6
           (Granulin D); Granulin-7 (Granulin E)]
          Length = 593

 Score = 65.9 bits (159), Expect = 4e-11
 Identities = 24/49 (48%), Positives = 29/49 (59%)
 Frame = +1

Query: 214 CPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRCVPGG 360
           C +   CP   +CC L +G +GCCP P  VCC D + CC QGY CV  G
Sbjct: 366 CDNVSSCPSSDTCCQLTSGEWGCCPIPEAVCCSDHQHCCPQGYTCVAEG 414


 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
 Frame = +1

Query: 193 RFGNKYV----CPDGG-HCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRC 348
           R GN  V    CPD    CP + +CC++++G +GCCP P   CC DR  CC  G  C
Sbjct: 115 RSGNNSVGAIQCPDSQFECPDFSTCCVMVDGSWGCCPMPQASCCEDRVHCCPHGAFC 171


 Score = 58.2 bits (139), Expect = 8e-09
 Identities = 24/63 (38%), Positives = 30/63 (47%)
 Frame = +1

Query: 160 VEKIPISELLLRFGNKYVCPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQG 339
           +EK+P     L       C     CP  Q+CC  + G + CC  P  VCC DR+ CC  G
Sbjct: 426 LEKMPARRASLSHPRDIGCDQHTSCPVGQTCCPSLGGSWACCQLPHAVCCEDRQHCCPAG 485

Query: 340 YRC 348
           Y C
Sbjct: 486 YTC 488


 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 211 VCPDG-GHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRC 348
           +CPD    CP   +CC L +G+YGCCP P   CC D   CC Q   C
Sbjct: 207 MCPDARSRCPDGSTCCELPSGKYGCCPMPNATCCSDHLHCCPQDTVC 253


 Score = 55.8 bits (133), Expect = 4e-08
 Identities = 21/49 (42%), Positives = 27/49 (55%)
 Frame = +1

Query: 214 CPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRCVPGG 360
           C +G  C   Q+CC      + CCP+  GVCC DR+ CC  G+RC   G
Sbjct: 521 CGEGHFCHDNQTCCRDNRQGWACCPYRQGVCCADRRHCCPAGFRCAARG 569


 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 19/39 (48%), Positives = 23/39 (58%)
 Frame = +1

Query: 232 CPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRC 348
           CP   +CC L +G +GCCPF   VCC D   CC  G+ C
Sbjct: 290 CPDGYTCCRLQSGAWGCCPFTQAVCCEDHIHCCPAGFTC 328


 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 20/51 (39%), Positives = 24/51 (47%)
 Frame = +1

Query: 214 CPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRCVPGGCS 366
           C    HC    SC   ++G   CCPFP  V C D   CC +G+ C   G S
Sbjct: 61  CQVDAHCSAGHSCIFTVSGTSSCCPFPEAVACGDGHHCCPRGFHCSADGRS 111

>sp|P23785|GRN_RAT Granulins precursor [Contains: Acrogranin; Granulin-1 (Granulin G);
           Granulin-2 (Granulin F); Granulin-3 (Granulin B)
           (Epithelin-2); Granulin-4 (Granulin A) (Epithelin-1);
           Granulin-5 (Granulin C); Granulin-6 (Granulin D);
           Granulin-7 (Granulin E)]
          Length = 588

 Score = 65.1 bits (157), Expect = 7e-11
 Identities = 24/53 (45%), Positives = 31/53 (58%)
 Frame = +1

Query: 202 NKYVCPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRCVPGG 360
           N   C D   CP   +CC L +G +GCCP P  VCC D + CC QG++C+  G
Sbjct: 359 NDVPCDDFSSCPSNNTCCRLSSGDWGCCPMPEAVCCLDHQHCCPQGFKCMDEG 411


 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 24/63 (38%), Positives = 32/63 (50%)
 Frame = +1

Query: 160 VEKIPISELLLRFGNKYVCPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQG 339
           +EK+P+ +  L       C     CP  Q+CC  + G + CC  P  VCC DR+ CC  G
Sbjct: 423 LEKMPVRQTTLLQHGDIGCDQHTSCPVGQTCCPSLKGSWACCQLPHAVCCEDRQHCCPAG 482

Query: 340 YRC 348
           Y C
Sbjct: 483 YTC 485


 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 211 VCPDGG-HCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRC 348
           VCPD    CP   +CC L  G+YGCCP P  +CC D   CC Q   C
Sbjct: 205 VCPDAKTQCPDDSTCCELPTGKYGCCPMPNAICCSDHLHCCPQDTVC 251


 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 21/50 (42%), Positives = 29/50 (58%)
 Frame = +1

Query: 199 GNKYVCPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRC 348
           G+++ CPD        +CC++I+G +GCCP P   CC DR  CC  G  C
Sbjct: 127 GSQFECPDSA------TCCIMIDGSWGCCPMPQASCCEDRVHCCPHGASC 170


 Score = 54.7 bits (130), Expect = 9e-08
 Identities = 23/56 (41%), Positives = 30/56 (53%)
 Frame = +1

Query: 214 CPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRCVPGGCST*KIN 381
           C    HCP   SC L ++G   CCPF  GV C D + CC +G+ C   G S  +I+
Sbjct: 61  CQIRDHCPDGYSCLLTVSGTSSCCPFSEGVSCDDGQHCCPRGFHCSADGKSCSQIS 116


 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 21/49 (42%), Positives = 26/49 (53%)
 Frame = +1

Query: 202 NKYVCPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRC 348
           N+  C     CP   +CC L  G +GCCPF   VCC D   CC  G++C
Sbjct: 277 NEVKCDLEVSCPDGYTCCRLNTGAWGCCPFTKAVCCEDHIHCCPAGFQC 325


 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
 Frame = +1

Query: 190 LRFGNKY---VCPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRCVPGG 360
           L FG+K     C  G  C   QSCC    G + CCP+  GVCC D + CC  G+ C   G
Sbjct: 505 LTFGSKVGNVECGAGHFCHDNQSCCKDSQGGWACCPYVKGVCCRDGRHCCPIGFHCSAKG 564

>sp|P28798|GRN_MOUSE Granulins precursor (Acrogranin) (Proepithelin) (PEPI) (PC
           cell-derived growth factor) (PCDGF) [Contains: Granulin
           1; Granulin 2; Granulin 3; Granulin 4; Granulin 5;
           Granulin 6; Granulin 7]
          Length = 589

 Score = 62.4 bits (150), Expect = 4e-10
 Identities = 23/49 (46%), Positives = 29/49 (59%)
 Frame = +1

Query: 214 CPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRCVPGG 360
           C D   CP   +CC L +G +GCCP P  VCC D + CC QG+ C+  G
Sbjct: 364 CDDFTRCPTNNTCCKLNSGDWGCCPIPEAVCCSDNQHCCPQGFTCLAQG 412


 Score = 58.5 bits (140), Expect = 6e-09
 Identities = 24/51 (47%), Positives = 27/51 (52%)
 Frame = +1

Query: 214 CPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRCVPGGCS 366
           C   GHCP   SC L ++G   CCPF  GV C D   CC QG+ C   G S
Sbjct: 61  CQTHGHCPAGYSCLLTVSGTSSCCPFSKGVSCGDGYHCCPQGFHCSADGKS 111


 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 211 VCPDGG-HCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRC 348
           VCPD    CP   +CC L  G+YGCCP P  +CC D   CC Q   C
Sbjct: 206 VCPDAKTQCPDDSTCCELPTGKYGCCPMPNAICCSDHLHCCPQDTVC 252


 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 20/50 (40%), Positives = 29/50 (58%)
 Frame = +1

Query: 199 GNKYVCPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRC 348
           G+++ CPD        +CC++++G +GCCP P   CC DR  CC  G  C
Sbjct: 127 GSQFECPDSA------TCCIMVDGSWGCCPMPQASCCEDRVHCCPHGASC 170


 Score = 56.2 bits (134), Expect = 3e-08
 Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +1

Query: 160 VEKIPISELL-LRFGNKYVCPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQ 336
           +EKIP  +   L+ G+   C     CP  Q+CC  + G + CC  P  VCC DR+ CC  
Sbjct: 424 LEKIPARQTTPLQIGD-IGCDQHTSCPVGQTCCPSLKGSWACCQLPHAVCCEDRQHCCPA 482

Query: 337 GYRC 348
           GY C
Sbjct: 483 GYTC 486


 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 19/39 (48%), Positives = 23/39 (58%)
 Frame = +1

Query: 232 CPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRC 348
           CP   +CC L  G +GCCPF   VCC D   CC  G++C
Sbjct: 288 CPEGYTCCRLNTGAWGCCPFAKAVCCEDHIHCCPAGFQC 326


 Score = 51.6 bits (122), Expect = 7e-07
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = +1

Query: 214 CPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRCVPGG 360
           C +G  C   Q+CC    G + CCP+  GVCC D + CC  G+ C   G
Sbjct: 517 CGEGHFCHDNQTCCKDSAGVWACCPYLKGVCCRDGRHCCPGGFHCSARG 565

>sp|P28797|GRN_CAVPO Granulins precursor (Proepithelin) (PEPI) [Contains: Acrogranin;
           Granulin-1; Granulin-2; Granulin-3; Granulin-4;
           Granulin-5; Granulin-6; Granulin-7]
          Length = 591

 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +1

Query: 211 VCPDG-GHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRC 348
           +CPD    CP   +CCLL +G YGCCP P  +CC D   CC Q   C
Sbjct: 207 ICPDSRSQCPDDTTCCLLASGEYGCCPMPNAICCSDHLHCCPQDTVC 253


 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 22/45 (48%), Positives = 28/45 (62%)
 Frame = +1

Query: 214 CPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRC 348
           C     CP  Q+CC L +G++GCCPFP  VCC D   CC + +RC
Sbjct: 283 CDQEVSCPEGQTCCRLQSGKWGCCPFPKAVCCEDHVHCCPERFRC 327


 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +1

Query: 214 CPDGG-HCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRC 348
           CP G   CP   +CC +++G +GCCP P   CC DR  CC  G  C
Sbjct: 112 CPGGEFECPDSSTCCHMLDGSWGCCPMPQASCCEDRVHCCPHGASC 157


 Score = 54.7 bits (130), Expect = 9e-08
 Identities = 21/49 (42%), Positives = 26/49 (53%)
 Frame = +1

Query: 214 CPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRCVPGG 360
           C D   C   Q+CC    G + CCPF  GVCC D++ CC  G+ C   G
Sbjct: 518 CGDRHFCHDEQTCCRDSRGGWACCPFHQGVCCKDQRHCCPAGFHCESQG 566


 Score = 52.8 bits (125), Expect = 3e-07
 Identities = 19/45 (42%), Positives = 23/45 (51%)
 Frame = +1

Query: 214 CPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRC 348
           C     CP  Q+CC  + G + CC  P  VCC D + CC  GY C
Sbjct: 441 CDQHASCPVRQTCCPKLGGGWACCQLPHAVCCEDGQHCCPAGYTC 485


 Score = 44.7 bits (104), Expect = 9e-05
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = +1

Query: 214 CPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRCVPGG 360
           C    +CP   SC L   G   CCPF   + C D   CC  G+ C   G
Sbjct: 47  CQSPANCPIGHSCVLTAAGTAACCPFSQAMACGDGHHCCPYGFHCSTDG 95


 Score = 32.7 bits (73), Expect = 0.36
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +1

Query: 214 CPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRCVP 354
           C +   C     CC L +G +GCCP   G  C   +  C+ G R  P
Sbjct: 378 CDEVVSCRPGNICCRLASGEWGCCPSSEGYLCMAGER-CQVGDRLAP 423

>sp|P81015|GRN3_CYPCA Granulin-3
          Length = 57

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 21/45 (46%), Positives = 25/45 (55%)
 Frame = +1

Query: 214 CPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRC 348
           C  G  CP   +CC    G + CCPF +G CC D + CCR GY C
Sbjct: 4   CDAGITCPSGTTCCRSPFGVWYCCPFLMGQCCRDGRHCCRHGYHC 48

>sp|P81014|GRN2_CYPCA Granulin-2
          Length = 57

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 20/39 (51%), Positives = 24/39 (61%)
 Frame = +1

Query: 232 CPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRC 348
           CP   +CC    G + CCPF +G CC D + CCR GYRC
Sbjct: 10  CPSRTTCCRSPFGVWYCCPFLMGQCCRDGRHCCRHGYRC 48

>sp|P81013|GRN1_CYPCA Granulin-1
          Length = 57

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 22/46 (47%), Positives = 26/46 (56%)
 Frame = +1

Query: 211 VCPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRC 348
           +CPDG       +CCL   G + CCPF +G CC D   CCR GY C
Sbjct: 9   ICPDG------TTCCLSPYGVWYCCPFSMGQCCRDGIHCCRHGYHC 48

>sp|P80930|ENA1_HORSE Antimicrobial peptide eNAP-1
          Length = 46

 Score = 51.6 bits (122), Expect = 7e-07
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = +1

Query: 214 CPDGGHCPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGY 342
           C +G  C   Q+CC    G   CCP+  GVCC D++ CC  G+
Sbjct: 4   CGEGHFCHDXQTCCRASQGGXACCPYSQGVCCADQRHCCPVGF 46

>sp|P80059|PMD1_LOCMI Pars intercerebralis major peptide D1 (PMP-D1)
          Length = 54

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 19/39 (48%), Positives = 22/39 (56%)
 Frame = +1

Query: 232 CPGYQSCCLLINGRYGCCPFPLGVCCPDRKSCCRQGYRC 348
           CPG ++CC    G  GCCP+  GVCC D   CC  G  C
Sbjct: 7   CPGTETCCTTPQGEEGCCPYKEGVCCLDGIHCCPSGTVC 45

>sp|P25776|ORYA_ORYSA Oryzain alpha chain precursor
          Length = 458

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
 Frame = +1

Query: 202 NKYVCPDGGHCPGYQSCCLLINGRY----GCCPFPLGVCCPDRKSCCRQGY 342
           N Y CPD   C     CC+   G+Y    GCCP     CC D  SCC   Y
Sbjct: 369 NYYTCPDSTTC-----CCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEY 414

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,415,046
Number of Sequences: 369166
Number of extensions: 1089698
Number of successful extensions: 3219
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3182
length of database: 68,354,980
effective HSP length: 100
effective length of database: 49,881,480
effective search space used: 2294548080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00137

  1. Dr_sW_004_H10
  2. Dr_sW_027_F08
  3. Dr_sW_001_I01
  4. Dr_sW_003_P21
  5. Dr_sW_012_C15
  6. Dr_sW_019_P07
  7. Dr_sW_014_C06
  8. Dr_sW_008_D14
  9. Dr_sW_012_O11
  10. Dr_sW_025_L02
  11. Dr_sW_026_A22
  12. Dr_sW_023_L24