Planaria EST Database


DrC_03023

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_03023
         (549 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q10010|YSV4_CAEEL  Hypothetical protein T19C3.4 in chromo...   147   2e-35
sp|Q5RE33|DP1_PONPY  Polyposis locus protein 1 homolog             87   3e-17
sp|Q60870|DP1_MOUSE  Polyposis locus protein 1 homolog (TB2 ...    86   8e-17
sp|Q51VY4|YOP1_MAGGR  Protein YOP1                                 84   2e-16
sp|Q8LEM6|A22H_ARATH  HVA22-like protein h (AtHVA22h)              83   5e-16
sp|Q8GXE9|A22J_ARATH  HVA22-like protein j (AtHVA22j)              81   1e-15
sp|Q4P0H0|YOP1_USTMA  Protein YOP1                                 81   2e-15
sp|Q8LE10|A22I_ARATH  HVA22-like protein i (AtHVA22i)              79   7e-15
sp|Q9LR09|A22G_ARATH  Putative HVA22-like protein g (AtHVA22g)     78   2e-14
sp|Q871R7|YOP1_NEUCR  Protein yop-1                                74   2e-13
>sp|Q10010|YSV4_CAEEL Hypothetical protein T19C3.4 in chromosome III
          Length = 229

 Score =  147 bits (371), Expect = 2e-35
 Identities = 66/157 (42%), Positives = 108/157 (68%), Gaps = 4/157 (2%)
 Frame = +2

Query: 56  LTALLSRCIILVFAILHPAYKSYKSLRQKNQKDILTWMMYWIVFAIFTAVETVTDVLLC- 232
           ++  LSR +I+    L+PAY+SYK++R K+ ++ + WMMYWIVFAI++ +E + D++L  
Sbjct: 1   MSETLSRLLIITAGTLYPAYRSYKAVRTKDTREYVKWMMYWIVFAIYSFLENLLDLVLAF 60

Query: 233 WIPFYYELKILFVLWMVLPVTKGYSIIFRRLIHPELSKREPEIDQIIEKASEKGYNAILE 412
           W PFY++LKI+F+ W++ P TKG SI++R+ +HP L++ E +ID ++E A  + YN ++ 
Sbjct: 61  WFPFYFQLKIVFIFWLLSPWTKGASILYRKWVHPTLNRHEKDIDALLESAKSESYNQLMR 120

Query: 413 FGAKGINFAASTVLTTAVKGQQLLAS---RSLSLGDL 514
            G+K + +A   V   AV+GQQ L +   RS S  D+
Sbjct: 121 IGSKSLVYAKDVVAEAAVRGQQQLVNQLQRSYSANDV 157
>sp|Q5RE33|DP1_PONPY Polyposis locus protein 1 homolog
          Length = 189

 Score = 86.7 bits (213), Expect = 3e-17
 Identities = 34/97 (35%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
 Frame = +2

Query: 104 HPAYKSYKSLRQKNQKDILTWMMYWIVFAIFTAVETVTDVLLCWIPFYYELKILFVLWMV 283
           +PAY S K++   N++D   W+ YW+V+ +F+  E  +D+ L W PFYY LK  F+LW +
Sbjct: 66  YPAYISIKAIESPNKEDDTQWLTYWVVYGVFSIAEFFSDIFLSWFPFYYMLKCGFLLWCM 125

Query: 284 LP-VTKGYSIIFRRLIHPELSKREPEIDQIIEKASEK 391
            P  + G  ++++R+I P   K E ++D +++   +K
Sbjct: 126 APSPSNGAELLYKRIIRPFFLKHESQVDSVVKDLKDK 162
>sp|Q60870|DP1_MOUSE Polyposis locus protein 1 homolog (TB2 protein homolog) (GP106)
          Length = 185

 Score = 85.5 bits (210), Expect = 8e-17
 Identities = 34/97 (35%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
 Frame = +2

Query: 104 HPAYKSYKSLRQKNQKDILTWMMYWIVFAIFTAVETVTDVLLCWIPFYYELKILFVLWMV 283
           +PAY S K++   N+ D   W+ YW+V+ +F+  E  +D+ L W+PFYY LK  F+LW +
Sbjct: 62  YPAYISMKAIESPNKDDDTQWLTYWVVYGVFSIAEFFSDLFLSWLPFYYMLKCGFLLWCM 121

Query: 284 LP-VTKGYSIIFRRLIHPELSKREPEIDQIIEKASEK 391
            P    G  +++RR+I P   + E ++D +++   +K
Sbjct: 122 APSPANGAEMLYRRIIRPIFLRHESQVDSVVKDVKDK 158
>sp|Q51VY4|YOP1_MAGGR Protein YOP1
          Length = 170

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 38/80 (47%), Positives = 52/80 (65%)
 Frame = +2

Query: 107 PAYKSYKSLRQKNQKDILTWMMYWIVFAIFTAVETVTDVLLCWIPFYYELKILFVLWMVL 286
           PAY S  +L   N++D   W+ YW+VFA+FT VE++  V+  W PFYY  K +F+LW+ L
Sbjct: 69  PAYYSLDALFSANKEDDTQWLTYWVVFAMFTVVESLVSVVY-WFPFYYMFKFVFLLWLSL 127

Query: 287 PVTKGYSIIFRRLIHPELSK 346
           P  KG  IIFR  + P LS+
Sbjct: 128 PAFKGADIIFRSFLAPTLSR 147
>sp|Q8LEM6|A22H_ARATH HVA22-like protein h (AtHVA22h)
          Length = 315

 Score = 82.8 bits (203), Expect = 5e-16
 Identities = 37/136 (27%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
 Frame = +2

Query: 53  MLTALLSRCIILVFAILHPAYKSYKSLRQKN--QKDILTWMMYWIVFAIFTAVETVTDVL 226
           M+ + L+R +++VF   +PAY+ YK++ +     + +  W  YWI+ A  T  E V D L
Sbjct: 1   MIGSFLTRGLVMVFGYAYPAYECYKAVEKNKPEMQQLRFWCQYWILVAALTIFERVGDAL 60

Query: 227 LCWIPFYYELKILFVLWMVLPVTKGYSIIFRRLIHPELSKREPEIDQIIEKASEKGYNAI 406
             W+P Y E K+ F +++  P T+G + ++     P ++K E EID+ + +   K  +  
Sbjct: 61  ASWVPLYCEAKLAFFIYLWFPKTRGTTYVYDSFFQPYVAKHENEIDRSLIELRTKAGDLA 120

Query: 407 LEFGAKGINFAASTVL 454
           + +  K +++  + ++
Sbjct: 121 VIYCRKAVSYGQTRIV 136
>sp|Q8GXE9|A22J_ARATH HVA22-like protein j (AtHVA22j)
          Length = 258

 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 42/152 (27%), Positives = 86/152 (56%), Gaps = 3/152 (1%)
 Frame = +2

Query: 53  MLTALLSRCIILVFAILHPAYKSYKSLRQKNQKDILT---WMMYWIVFAIFTAVETVTDV 223
           ML   + R ++L+    +PA++ +K++ +KN+ DI     W  YWI+ A+ ++ E V D 
Sbjct: 1   MLGDFIIRLLVLILGYTYPAFECFKTV-EKNKVDIEELRFWCQYWILLALISSFERVGDF 59

Query: 224 LLCWIPFYYELKILFVLWMVLPVTKGYSIIFRRLIHPELSKREPEIDQIIEKASEKGYNA 403
            + W+P Y E+K++F +++  P TKG   ++  L+ P +++ E EID+ I +   + ++ 
Sbjct: 60  FISWLPLYGEMKVVFFVYLWYPKTKGTRHVYETLLKPYMAQHETEIDRKIMELRARAWDF 119

Query: 404 ILEFGAKGINFAASTVLTTAVKGQQLLASRSL 499
            + +     N  A    +T ++G Q + ++S+
Sbjct: 120 FIFY----FNNFAQAGQSTLIQGFQYVLAQSV 147
>sp|Q4P0H0|YOP1_USTMA Protein YOP1
          Length = 172

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 32/87 (36%), Positives = 56/87 (64%)
 Frame = +2

Query: 107 PAYKSYKSLRQKNQKDILTWMMYWIVFAIFTAVETVTDVLLCWIPFYYELKILFVLWMVL 286
           PAY S K+L     +D + W+ YW+VF +FT +ET  +++L +IP+YY +K L ++W++L
Sbjct: 73  PAYFSLKALESPQPQDDIQWLTYWVVFGLFTFLETFINIVLYYIPWYYTIKTLAIVWLML 132

Query: 287 PVTKGYSIIFRRLIHPELSKREPEIDQ 367
           P T+G  +++ R+I P     +  + Q
Sbjct: 133 PQTQGAKMVYSRIIRPVFLTTQKTVHQ 159
>sp|Q8LE10|A22I_ARATH HVA22-like protein i (AtHVA22i)
          Length = 296

 Score = 79.0 bits (193), Expect = 7e-15
 Identities = 39/123 (31%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
 Frame = +2

Query: 53  MLTALLSRCIILVFAILHPAYKSYKSLRQKNQKDILT---WMMYWIVFAIFTAVETVTDV 223
           M+ + L+R +++V    +PAY+ YK++ +KN+ +I     W  YWI+ A  T  E V D 
Sbjct: 1   MIGSFLTRGLVMVLGYAYPAYECYKTV-EKNRPEIEQLRFWCQYWILVACLTVFERVGDA 59

Query: 224 LLCWIPFYYELKILFVLWMVLPVTKGYSIIFRRLIHPELSKREPEID-QIIEKASEKGYN 400
            + W+P Y E K+ F +++  P T+G + ++     P LS+ E +ID  ++E  +  G  
Sbjct: 60  FVSWVPMYSEAKLAFFIYLWYPKTRGTTYVYESFFRPYLSQHENDIDHSLLELRTRAGDM 119

Query: 401 AIL 409
           A++
Sbjct: 120 AVI 122
>sp|Q9LR09|A22G_ARATH Putative HVA22-like protein g (AtHVA22g)
          Length = 166

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
 Frame = +2

Query: 86  LVFAILHPAYKSYKS--LRQKNQKDILTWMMYWIVFAIFTAVETVTDVLLCWIPFYYELK 259
           +VF   +PAY+ +K+  L +   + +  W  YWI+ A  T  E + D L+ W+P Y E K
Sbjct: 1   MVFGYAYPAYECFKTVELNKPEIQQLQFWCQYWIIVAALTIFERIGDALVSWLPMYSEAK 60

Query: 260 ILFVLWMVLPVTKGYSIIFRRLIHPELSKREPEIDQIIEKASEKGYNAILEFGAKGIN 433
           + F +++  P TKG + ++     P ++K E EID+ + K   +  +  + +  K IN
Sbjct: 61  LAFFIYLWFPKTKGTTYVYDSFFRPYIAKHENEIDRNLVKVKTRAKDMAMIYLQKAIN 118
>sp|Q871R7|YOP1_NEUCR Protein yop-1
          Length = 168

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 31/80 (38%), Positives = 49/80 (61%)
 Frame = +2

Query: 107 PAYKSYKSLRQKNQKDILTWMMYWIVFAIFTAVETVTDVLLCWIPFYYELKILFVLWMVL 286
           P Y S  +L   +++D   W+ YW+VF++FT +E++  V+  W PFY+  K +F+LW+ L
Sbjct: 69  PGYYSLNALFTASKQDDTQWLTYWVVFSLFTVIESLISVVY-WFPFYFTFKFVFLLWLSL 127

Query: 287 PVTKGYSIIFRRLIHPELSK 346
           P  KG   IFR  + P L +
Sbjct: 128 PTFKGAETIFRSFLAPTLGR 147
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,009,894
Number of Sequences: 369166
Number of extensions: 999804
Number of successful extensions: 3185
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3176
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 3833118120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)