Planaria EST Database


DrC_02983

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02983
         (781 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9R0M8|S35A2_MOUSE  UDP-galactose translocator (UDP-galac...   181   3e-45
sp|P78381|S35A2_HUMAN  UDP-galactose translocator (UDP-galac...   179   6e-45
sp|P78382|S35A1_HUMAN  CMP-sialic acid transporter (CMP-Sia-...   172   9e-43
sp|Q61420|S35A1_MOUSE  CMP-sialic acid transporter (CMP-Sia-...   167   4e-41
sp|O08520|S35A1_CRIGR  CMP-sialic acid transporter (CMP-Sia-...   166   9e-41
sp|Q9Y2D2|S35A3_HUMAN  UDP-N-acetylglucosamine transporter (...   165   1e-40
sp|Q6AXR5|S35A3_RAT  UDP-N-acetylglucosamine transporter (Go...   164   3e-40
sp|O77592|S35A3_CANFA  UDP-N-acetylglucosamine transporter (...   163   4e-40
sp|Q6YC49|S35A3_BOVIN  UDP-N-acetylglucosamine transporter (...   163   6e-40
sp|Q8R1T4|S35A3_MOUSE  UDP-N-acetylglucosamine transporter (...   162   7e-40
>sp|Q9R0M8|S35A2_MOUSE UDP-galactose translocator (UDP-galactose transporter) (UGT)
           (UDP-Gal-Tr) (Solute carrier family 35 member A2)
           (mUGT1)
          Length = 390

 Score =  181 bits (458), Expect = 3e-45
 Identities = 98/220 (44%), Positives = 130/220 (59%)
 Frame = +2

Query: 53  MRFVRTRPGDLFSSSTAVVWSEAFKFFMSLSILLYSFKFNVKKFATHLKENIINDPKDWL 232
           +R+ RT PGD F ++TAVV +E  K    L +L    + NVK     L E ++    D L
Sbjct: 54  IRYARTLPGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYVDTL 113

Query: 233 LIAVPAVIYVLQNNLLFVAISNLDAATFQVCYQXXXXXXXXXXXXXXXXXXSKIQWFSLL 412
            +AVP++IY LQNNL +VAISNL AATFQV YQ                  S++QW SLL
Sbjct: 114 KLAVPSLIYTLQNNLQYVAISNLPAATFQVTYQLKILTTALFSVLMLNRSLSRLQWASLL 173

Query: 413 LLFVGIALVQLQQVNKTADKAGASQNPTIGIAVVVVASLMSGFGGVYFEKILKNTPKNVW 592
           LLF G+A+VQ QQ   +  +    QNP  G+A VV + L SGF GVYFEKILK +  +VW
Sbjct: 174 LLFTGVAIVQAQQAGGSGPRP-LDQNPGAGLAAVVASCLSSGFAGVYFEKILKGSSGSVW 232

Query: 593 IRNIQLSTYGVVFGLMTVFFTNKDEIIKKGFFFGYDYLVW 712
           +RN+QL  +G   GL+ +++     +  +GFFFGY   VW
Sbjct: 233 LRNLQLGLFGTALGLVGLWWAEGTAVASQGFFFGYTPAVW 272

 Score = 35.0 bits (79), Expect = 0.23
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = +3

Query: 717 VIIIQSIGGLLVAVVIKYADN 779
           V++ Q+ GGLLVAVV+KYADN
Sbjct: 274 VVLNQAFGGLLVAVVVKYADN 294
>sp|P78381|S35A2_HUMAN UDP-galactose translocator (UDP-galactose transporter) (UGT)
           (UDP-Gal-Tr) (Solute carrier family 35 member A2)
          Length = 396

 Score =  179 bits (455), Expect = 6e-45
 Identities = 98/220 (44%), Positives = 129/220 (58%)
 Frame = +2

Query: 53  MRFVRTRPGDLFSSSTAVVWSEAFKFFMSLSILLYSFKFNVKKFATHLKENIINDPKDWL 232
           +R+ RT PGD F ++TAVV +E  K    L +L    + NVK     L E ++    D L
Sbjct: 54  IRYARTLPGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNVKHLVLFLHEAVLVQYVDTL 113

Query: 233 LIAVPAVIYVLQNNLLFVAISNLDAATFQVCYQXXXXXXXXXXXXXXXXXXSKIQWFSLL 412
            +AVP++IY LQNNL +VAISNL AATFQV YQ                  S++QW SLL
Sbjct: 114 KLAVPSLIYTLQNNLQYVAISNLPAATFQVTYQLKILTTALFSVLMLNRSLSRLQWASLL 173

Query: 413 LLFVGIALVQLQQVNKTADKAGASQNPTIGIAVVVVASLMSGFGGVYFEKILKNTPKNVW 592
           LLF G+A+VQ QQ      +    QNP  G+A VV + L SGF GVYFEKILK +  +VW
Sbjct: 174 LLFTGVAIVQAQQAGGGGPRP-LDQNPGAGLAAVVASCLSSGFAGVYFEKILKGSSGSVW 232

Query: 593 IRNIQLSTYGVVFGLMTVFFTNKDEIIKKGFFFGYDYLVW 712
           +RN+QL  +G   GL+ +++     +  +GFFFGY   VW
Sbjct: 233 LRNLQLGLFGTALGLVGLWWAEGTAVATRGFFFGYTPAVW 272

 Score = 35.0 bits (79), Expect = 0.23
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = +3

Query: 717 VIIIQSIGGLLVAVVIKYADN 779
           V++ Q+ GGLLVAVV+KYADN
Sbjct: 274 VVLNQAFGGLLVAVVVKYADN 294
>sp|P78382|S35A1_HUMAN CMP-sialic acid transporter (CMP-Sia-Tr) (CMP-SA-Tr) (Solute
           carrier family 35 member A1)
          Length = 337

 Score =  172 bits (436), Expect = 9e-43
 Identities = 86/220 (39%), Positives = 133/220 (60%)
 Frame = +2

Query: 53  MRFVRTRPGDLFSSSTAVVWSEAFKFFMSLSILLYSFKFNVKKFATHLKENIINDPKDWL 232
           +R+ RT   +L+ S+TAV  +E  K  +S+ IL      ++ +F   L+EN++  PK+ L
Sbjct: 31  LRYTRTSDKELYFSTTAVCITEVIKLLLSVGILAKETG-SLGRFKASLRENVLGSPKELL 89

Query: 233 LIAVPAVIYVLQNNLLFVAISNLDAATFQVCYQXXXXXXXXXXXXXXXXXXSKIQWFSLL 412
            ++VP+++Y +QNN+ F+A+SNLDAA +QV YQ                  SK+QW S+ 
Sbjct: 90  KLSVPSLVYAVQNNMAFLALSNLDAAVYQVTYQLKIPCTALCTVLMLNRTLSKLQWVSVF 149

Query: 413 LLFVGIALVQLQQVNKTADKAGASQNPTIGIAVVVVASLMSGFGGVYFEKILKNTPKNVW 592
           +L  G+ LVQ +    T  K    QNP +G   + +A L SGF GVYFEK+LK++  ++W
Sbjct: 150 MLCAGVTLVQWKPAQAT--KVVVEQNPLLGFGAIAIAVLCSGFAGVYFEKVLKSSDTSLW 207

Query: 593 IRNIQLSTYGVVFGLMTVFFTNKDEIIKKGFFFGYDYLVW 712
           +RNIQ+   G++  L  V+ ++  EI +KGFF+GY Y VW
Sbjct: 208 VRNIQMYLSGIIVTLAGVYLSDGAEIKEKGFFYGYTYYVW 247

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 675 KRDFSLDMTIWCGLVIIIQSIGGLLVAVVIKYADN 779
           ++ F    T +   VI + S+GGL  +VV+KY DN
Sbjct: 235 EKGFFYGYTYYVWFVIFLASVGGLYTSVVVKYTDN 269
>sp|Q61420|S35A1_MOUSE CMP-sialic acid transporter (CMP-Sia-Tr) (CMP-SA-Tr) (Solute
           carrier family 35 member A1)
          Length = 336

 Score =  167 bits (422), Expect = 4e-41
 Identities = 84/220 (38%), Positives = 131/220 (59%)
 Frame = +2

Query: 53  MRFVRTRPGDLFSSSTAVVWSEAFKFFMSLSILLYSFKFNVKKFATHLKENIINDPKDWL 232
           +R+ RT   +L+ S+TAV  +E  K  +S+ +L      ++ +F   L EN++  PK+  
Sbjct: 31  LRYTRTTAEELYFSTTAVCITEVIKLLISVGLLAKETG-SLGRFKASLSENVLGSPKELA 89

Query: 233 LIAVPAVIYVLQNNLLFVAISNLDAATFQVCYQXXXXXXXXXXXXXXXXXXSKIQWFSLL 412
            ++VP+++Y +QNN+ F+A+SNLDAA +QV YQ                  SK+QW S+ 
Sbjct: 90  KLSVPSLVYAVQNNMAFLALSNLDAAVYQVTYQLKIPCTALCTVLMLNRTLSKLQWISVF 149

Query: 413 LLFVGIALVQLQQVNKTADKAGASQNPTIGIAVVVVASLMSGFGGVYFEKILKNTPKNVW 592
           +L  G+ LVQ +     A K   +QNP +G   + +A L SGF GVYFEK+LK++  ++W
Sbjct: 150 MLCGGVTLVQWKPAQ--ASKVVVAQNPLLGFGAIAIAVLCSGFAGVYFEKVLKSSDTSLW 207

Query: 593 IRNIQLSTYGVVFGLMTVFFTNKDEIIKKGFFFGYDYLVW 712
           +RNIQ+   G+V  L   + ++  EI +KGFF+GY Y VW
Sbjct: 208 VRNIQMYLSGIVVTLAGTYLSDGAEIQEKGFFYGYTYYVW 247

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 675 KRDFSLDMTIWCGLVIIIQSIGGLLVAVVIKYADN 779
           ++ F    T +   VI + S+GGL  +VV+KY DN
Sbjct: 235 EKGFFYGYTYYVWFVIFLASVGGLYTSVVVKYTDN 269
>sp|O08520|S35A1_CRIGR CMP-sialic acid transporter (CMP-Sia-Tr) (CMP-SA-Tr) (Solute
           carrier family 35 member A1)
          Length = 336

 Score =  166 bits (419), Expect = 9e-41
 Identities = 83/220 (37%), Positives = 132/220 (60%)
 Frame = +2

Query: 53  MRFVRTRPGDLFSSSTAVVWSEAFKFFMSLSILLYSFKFNVKKFATHLKENIINDPKDWL 232
           +R+ RT   +L+ S+TAV  +E  K  +S+ +L      ++ +F   L EN++  PK+ +
Sbjct: 31  LRYTRTTAKELYFSTTAVCVTEVIKLLISVGLLAKETG-SLGRFKASLSENVLGSPKELM 89

Query: 233 LIAVPAVIYVLQNNLLFVAISNLDAATFQVCYQXXXXXXXXXXXXXXXXXXSKIQWFSLL 412
            ++VP+++Y +QNN+ F+A+SNLDAA +QV YQ                  SK+QW S+ 
Sbjct: 90  KLSVPSLVYAVQNNMAFLALSNLDAAVYQVTYQLKIPCTALCTVLMLNRTLSKLQWVSVF 149

Query: 413 LLFVGIALVQLQQVNKTADKAGASQNPTIGIAVVVVASLMSGFGGVYFEKILKNTPKNVW 592
           +L  G+ LVQ +    T  K    Q+P +G   + +A L SGF GVYFEK+LK++  ++W
Sbjct: 150 MLCGGVILVQWKPAQAT--KVVVEQSPLLGFGAIAIAVLCSGFAGVYFEKVLKSSDTSLW 207

Query: 593 IRNIQLSTYGVVFGLMTVFFTNKDEIIKKGFFFGYDYLVW 712
           +RNIQ+   G+V  L+  + ++  EI +KGFF+GY Y VW
Sbjct: 208 VRNIQMYLSGIVVTLVGTYLSDGAEIKEKGFFYGYTYYVW 247

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 675 KRDFSLDMTIWCGLVIIIQSIGGLLVAVVIKYADN 779
           ++ F    T +   VI + S+GGL  +VV+KY DN
Sbjct: 235 EKGFFYGYTYYVWFVIFLASVGGLYTSVVVKYTDN 269
>sp|Q9Y2D2|S35A3_HUMAN UDP-N-acetylglucosamine transporter (Golgi UDP-GlcNAc transporter)
           (Solute carrier family 35 member A3)
          Length = 325

 Score =  165 bits (418), Expect = 1e-40
 Identities = 90/223 (40%), Positives = 129/223 (57%), Gaps = 2/223 (0%)
 Frame = +2

Query: 53  MRFVRT--RPGDLFSSSTAVVWSEAFKFFMSLSILLYSFKFNVKKFATHLKENIINDPKD 226
           MR+ RT    G  + SSTAVV +E  K    + ++    K +++     L + I+N P +
Sbjct: 24  MRYSRTLKEEGPRYLSSTAVVVAELLKIMACILLVYKDSKCSLRALNRVLHDEILNKPME 83

Query: 227 WLLIAVPAVIYVLQNNLLFVAISNLDAATFQVCYQXXXXXXXXXXXXXXXXXXSKIQWFS 406
            L +A+P+ IY LQNNLL+VA+SNLDAAT+QV YQ                     QW S
Sbjct: 84  TLKLAIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVSMLSKKLGVYQWLS 143

Query: 407 LLLLFVGIALVQLQQVNKTADKAGASQNPTIGIAVVVVASLMSGFGGVYFEKILKNTPKN 586
           L++L  G+A VQ    ++   K  ++ +  +G+  V+ A   SGF GVYFEKILK T ++
Sbjct: 144 LVILMTGVAFVQWPSDSQLDSKELSAGSQFVGLMAVLTACFSSGFAGVYFEKILKETKQS 203

Query: 587 VWIRNIQLSTYGVVFGLMTVFFTNKDEIIKKGFFFGYDYLVWV 715
           VWIRNIQL  +G +FGLM V+  + + + K GFF GY+ L W+
Sbjct: 204 VWIRNIQLGFFGSIFGLMGVYIYDGELVSKNGFFQGYNRLTWI 246

 Score = 36.2 bits (82), Expect = 0.10
 Identities = 13/22 (59%), Positives = 21/22 (95%)
 Frame = +3

Query: 714 LVIIIQSIGGLLVAVVIKYADN 779
           +V+++Q++GGL++A VIKYADN
Sbjct: 246 IVVVLQALGGLVIAAVIKYADN 267
>sp|Q6AXR5|S35A3_RAT UDP-N-acetylglucosamine transporter (Golgi UDP-GlcNAc transporter)
           (Solute carrier family 35 member A3)
          Length = 326

 Score =  164 bits (415), Expect = 3e-40
 Identities = 95/227 (41%), Positives = 133/227 (58%), Gaps = 6/227 (2%)
 Frame = +2

Query: 53  MRFVRT--RPGDLFSSSTAVVWSEAFKFFMSLSILLYSFKFNVKKFATHLKENIINDPKD 226
           MR+ RT    G  + SSTAVV +E  K    + ++    K +V+     L + I+N P +
Sbjct: 24  MRYSRTLKEEGPRYLSSTAVVVAEFLKIMACIFLVYKDSKCSVRTLNRVLHDEILNKPME 83

Query: 227 WLLIAVPAVIYVLQNNLLFVAISNLDAATFQVCYQXXXXXXXXXXXXXXXXXXSKIQWFS 406
            L +A+P+ IY LQNNLL+VA+SNLDAAT+QV YQ                     QW S
Sbjct: 84  TLKLAIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVSMLGKKLGMYQWLS 143

Query: 407 LLLLFVGIALVQL----QQVNKTADKAGASQNPTIGIAVVVVASLMSGFGGVYFEKILKN 574
           L++L  G+A VQ     Q++N + D +  SQ   +G+  V++A   SGF GVYFEKILK 
Sbjct: 144 LVILMAGVAFVQWPSDSQELN-SKDLSTGSQ--FVGLMAVLIACFSSGFAGVYFEKILKE 200

Query: 575 TPKNVWIRNIQLSTYGVVFGLMTVFFTNKDEIIKKGFFFGYDYLVWV 715
           T ++VWIRNIQL  +G +FGLM V+  + + + K GFF GY+ L W+
Sbjct: 201 TKQSVWIRNIQLGFFGSIFGLMGVYVYDGELVSKNGFFQGYNQLTWI 247

 Score = 36.2 bits (82), Expect = 0.10
 Identities = 13/22 (59%), Positives = 21/22 (95%)
 Frame = +3

Query: 714 LVIIIQSIGGLLVAVVIKYADN 779
           +V+++Q++GGL++A VIKYADN
Sbjct: 247 IVVVLQALGGLVIAAVIKYADN 268
>sp|O77592|S35A3_CANFA UDP-N-acetylglucosamine transporter (Golgi UDP-GlcNAc transporter)
           (Solute carrier family 35 member A3)
          Length = 326

 Score =  163 bits (413), Expect = 4e-40
 Identities = 91/224 (40%), Positives = 130/224 (58%), Gaps = 3/224 (1%)
 Frame = +2

Query: 53  MRFVRT--RPGDLFSSSTAVVWSEAFKFFMSLSILLYSFKFNVKKFATHLKENIINDPKD 226
           MR+ RT    G  + SSTAVV +E  K    + ++    K +++     L + I+N P +
Sbjct: 24  MRYSRTLKEEGPRYLSSTAVVVAELLKIMACILLVYKDSKCSLRALNRILHDEILNKPME 83

Query: 227 WLLIAVPAVIYVLQNNLLFVAISNLDAATFQVCYQXXXXXXXXXXXXXXXXXXSKIQWFS 406
            L +A+P+ IY LQNNLL+VA+SNLDAAT+QV YQ                     QW S
Sbjct: 84  TLKLAIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVSMLSKKLGVYQWLS 143

Query: 407 LLLLFVGIALVQLQQVNKTAD-KAGASQNPTIGIAVVVVASLMSGFGGVYFEKILKNTPK 583
           L++L  G+A VQ    ++  D K  ++ +  +G+  V+ A   SGF GVYFEKILK T +
Sbjct: 144 LVILMTGVAFVQWPSDSQELDSKELSAGSQFVGLMAVLTACFSSGFAGVYFEKILKETKQ 203

Query: 584 NVWIRNIQLSTYGVVFGLMTVFFTNKDEIIKKGFFFGYDYLVWV 715
           +VWIRNIQL  +G +FGLM V+  + + + K GFF GY+ L W+
Sbjct: 204 SVWIRNIQLGFFGSIFGLMGVYIYDGELVSKNGFFQGYNRLTWI 247

 Score = 36.6 bits (83), Expect = 0.079
 Identities = 14/22 (63%), Positives = 21/22 (95%)
 Frame = +3

Query: 714 LVIIIQSIGGLLVAVVIKYADN 779
           +V+I+Q++GGL++A VIKYADN
Sbjct: 247 IVVILQALGGLVIAAVIKYADN 268
>sp|Q6YC49|S35A3_BOVIN UDP-N-acetylglucosamine transporter (Golgi UDP-GlcNAc transporter)
           (Solute carrier family 35 member A3)
          Length = 326

 Score =  163 bits (412), Expect = 6e-40
 Identities = 93/227 (40%), Positives = 130/227 (57%), Gaps = 6/227 (2%)
 Frame = +2

Query: 53  MRFVRT--RPGDLFSSSTAVVWSEAFKFFMSLSILLYSFKFNVKKFATHLKENIINDPKD 226
           MR+ RT    G  + SSTAVV +E  K    + ++    K +++     L + I+N P +
Sbjct: 24  MRYSRTLKEEGPRYLSSTAVVVAELLKIMACILLVYKDSKCSLRALNRILHDEILNKPME 83

Query: 227 WLLIAVPAVIYVLQNNLLFVAISNLDAATFQVCYQXXXXXXXXXXXXXXXXXXSKIQWFS 406
            L +A+P+ IY LQNNLL+VA+SNLDAAT+QV YQ                     QW S
Sbjct: 84  TLKLAIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVSMLSKKLGVYQWLS 143

Query: 407 LLLLFVGIALVQL----QQVNKTADKAGASQNPTIGIAVVVVASLMSGFGGVYFEKILKN 574
           L++L  G+A VQ     Q++N     AG+     +G+  V+ A   SGF GVYFEKILK 
Sbjct: 144 LVILMTGVAFVQWPSDSQELNSKELSAGSQ---FVGLMAVLTACFSSGFAGVYFEKILKE 200

Query: 575 TPKNVWIRNIQLSTYGVVFGLMTVFFTNKDEIIKKGFFFGYDYLVWV 715
           T ++VWIRNIQL  +G +FGLM V+  + + + K GFF GY+ L W+
Sbjct: 201 TKQSVWIRNIQLGFFGSIFGLMGVYVYDGELVSKNGFFQGYNRLTWI 247

 Score = 36.2 bits (82), Expect = 0.10
 Identities = 13/22 (59%), Positives = 21/22 (95%)
 Frame = +3

Query: 714 LVIIIQSIGGLLVAVVIKYADN 779
           +V+++Q++GGL++A VIKYADN
Sbjct: 247 IVVVLQALGGLVIAAVIKYADN 268
>sp|Q8R1T4|S35A3_MOUSE UDP-N-acetylglucosamine transporter (Golgi UDP-GlcNAc transporter)
           (Solute carrier family 35 member A3)
          Length = 326

 Score =  162 bits (411), Expect = 7e-40
 Identities = 95/227 (41%), Positives = 132/227 (58%), Gaps = 6/227 (2%)
 Frame = +2

Query: 53  MRFVRT--RPGDLFSSSTAVVWSEAFKFFMSLSILLYSFKFNVKKFATHLKENIINDPKD 226
           MR+ RT    G  + SSTAVV +E  K    + ++    K +V+     L + I+N P +
Sbjct: 24  MRYSRTLKEEGPRYLSSTAVVVAEFLKIMACIFLVYKDSKCSVRALNRVLHDEILNKPME 83

Query: 227 WLLIAVPAVIYVLQNNLLFVAISNLDAATFQVCYQXXXXXXXXXXXXXXXXXXSKIQWFS 406
            L +A+P+ IY LQNNLL+VA+SNLDAAT+QV YQ                     QW S
Sbjct: 84  TLKLAIPSGIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVSMLGKKLGVYQWLS 143

Query: 407 LLLLFVGIALVQL----QQVNKTADKAGASQNPTIGIAVVVVASLMSGFGGVYFEKILKN 574
           L++L  G+A VQ     Q++N + D +  SQ   +G+  V+ A   SGF GVYFEKILK 
Sbjct: 144 LVILMAGVAFVQWPSDSQELN-SKDLSTGSQ--FVGLMAVLTACFSSGFAGVYFEKILKE 200

Query: 575 TPKNVWIRNIQLSTYGVVFGLMTVFFTNKDEIIKKGFFFGYDYLVWV 715
           T ++VWIRNIQL  +G +FGLM V+  + + + K GFF GY+ L W+
Sbjct: 201 TKQSVWIRNIQLGFFGSIFGLMGVYVYDGELVSKNGFFQGYNQLTWI 247

 Score = 34.7 bits (78), Expect = 0.30
 Identities = 13/22 (59%), Positives = 20/22 (90%)
 Frame = +3

Query: 714 LVIIIQSIGGLLVAVVIKYADN 779
           +V+ +Q++GGL++A VIKYADN
Sbjct: 247 IVVALQALGGLVIAAVIKYADN 268
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,254,532
Number of Sequences: 369166
Number of extensions: 1679726
Number of successful extensions: 4735
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4706
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7308943600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)