Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_02962
(863 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9JJZ2|TBA8_MOUSE Tubulin alpha-8 chain (Alpha-tubulin 8) 314 2e-85
sp|Q9NY65|TBA8_HUMAN Tubulin alpha-8 chain (Alpha-tubulin 8) 313 3e-85
sp|Q6AY56|TBA8_RAT Tubulin alpha-8 chain (Alpha-tubulin 8) 313 3e-85
sp|P14641|TBA2_MAIZE Tubulin alpha-2 chain (Alpha-2 tubulin) 313 4e-85
sp|P14640|TBA1_MAIZE Tubulin alpha-1 chain (Alpha-1 tubulin) 313 4e-85
sp|O22347|TBA1_ELEIN Tubulin alpha-1 chain (Alpha-1 tubulin) 313 5e-85
sp|Q9FT36|TBA_DAUCA Tubulin alpha chain 311 1e-84
sp|P46259|TBA1_PEA Tubulin alpha-1 chain 311 1e-84
sp|Q6VAF9|TBA4_GOSHI Tubulin alpha-4 chain (Alpha-4 tubulin) 311 1e-84
sp|Q6VAG0|TBA2_GOSHI Tubulin alpha-2 chain (Alpha-2 tubulin) 311 1e-84
>sp|Q9JJZ2|TBA8_MOUSE Tubulin alpha-8 chain (Alpha-tubulin 8)
Length = 449
Score = 314 bits (804), Expect = 2e-85
Identities = 149/288 (51%), Positives = 208/288 (72%), Gaps = 3/288 (1%)
Frame = +3
Query: 6 INVGQSGVQLANASWELFCIEHGIQANGQL---KETLQDDDSTAFTTFFHEVPNGQYVPR 176
++VGQ+GVQ+ NA WELFC+EHGIQA+G + DDDS FTTFF E NG++VPR
Sbjct: 7 VHVGQAGVQIGNACWELFCLEHGIQADGTFGTQASKINDDDS--FTTFFSETGNGKHVPR 64
Query: 177 VVSVDLEPTVLDEVRTGAYRNLFHPDQLISGSEDAANNFARGHFTIGKTMIDRIMLLVRK 356
V VDLEPTV+DEVR G YR LFHP+QLI+G EDAANN+ARGH+T+GK ID ++ +RK
Sbjct: 65 AVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRK 124
Query: 357 SVECCDYLQNFFILNXXXXXXXXXXXXXXXDRLAIEYTNRFRVQLSICISPILTTSVVEP 536
+ C LQ F I + +RL+++Y + +++ +I +P ++T+VVEP
Sbjct: 125 LTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEP 184
Query: 537 YNAMLTIHSSMDHTDIAILTDNEAIYTICKETLDISRPTYANINRIIAQNFSDMTASIRF 716
YN++LT H++++H+D A + DNEAIY IC+ LDI RPTY N+NR+I+Q S +TAS+RF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRF 244
Query: 717 ESSLSSDMDQLITNLIPYPRIHFPVMSHAPNISICRAEHQQLSTPEIT 860
+ +L+ D+ + TNL+PYPRIHFP++++AP IS +A H+QLS EIT
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEIT 292
>sp|Q9NY65|TBA8_HUMAN Tubulin alpha-8 chain (Alpha-tubulin 8)
Length = 449
Score = 313 bits (803), Expect = 3e-85
Identities = 148/288 (51%), Positives = 208/288 (72%), Gaps = 3/288 (1%)
Frame = +3
Query: 6 INVGQSGVQLANASWELFCIEHGIQANGQLK---ETLQDDDSTAFTTFFHEVPNGQYVPR 176
++VGQ+GVQ+ NA WELFC+EHGIQA+G + DDDS FTTFF E NG++VPR
Sbjct: 7 VHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDS--FTTFFSETGNGKHVPR 64
Query: 177 VVSVDLEPTVLDEVRTGAYRNLFHPDQLISGSEDAANNFARGHFTIGKTMIDRIMLLVRK 356
V +DLEPTV+DEVR G YR LFHP+QLI+G EDAANN+ARGH+T+GK ID ++ +RK
Sbjct: 65 AVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRK 124
Query: 357 SVECCDYLQNFFILNXXXXXXXXXXXXXXXDRLAIEYTNRFRVQLSICISPILTTSVVEP 536
+ C LQ F I + +RL+++Y + +++ +I +P ++T+VVEP
Sbjct: 125 LTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEP 184
Query: 537 YNAMLTIHSSMDHTDIAILTDNEAIYTICKETLDISRPTYANINRIIAQNFSDMTASIRF 716
YN++LT H++++H+D A + DNEAIY IC+ LDI RPTY N+NR+I+Q S +TAS+RF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRF 244
Query: 717 ESSLSSDMDQLITNLIPYPRIHFPVMSHAPNISICRAEHQQLSTPEIT 860
+ +L+ D+ + TNL+PYPRIHFP++++AP IS +A H+QLS EIT
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEIT 292
>sp|Q6AY56|TBA8_RAT Tubulin alpha-8 chain (Alpha-tubulin 8)
Length = 449
Score = 313 bits (803), Expect = 3e-85
Identities = 148/288 (51%), Positives = 208/288 (72%), Gaps = 3/288 (1%)
Frame = +3
Query: 6 INVGQSGVQLANASWELFCIEHGIQANGQL---KETLQDDDSTAFTTFFHEVPNGQYVPR 176
++VGQ+GVQ+ NA WELFC+EHGIQA+G + DDDS FTTFF E NG++VPR
Sbjct: 7 VHVGQAGVQIGNACWELFCLEHGIQADGTFGTQASKINDDDS--FTTFFSETGNGKHVPR 64
Query: 177 VVSVDLEPTVLDEVRTGAYRNLFHPDQLISGSEDAANNFARGHFTIGKTMIDRIMLLVRK 356
V VDLEPTV+DEVR G YR LFHP+QLI+G EDAANN+ARGH+T+GK ID ++ +RK
Sbjct: 65 AVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLDRIRK 124
Query: 357 SVECCDYLQNFFILNXXXXXXXXXXXXXXXDRLAIEYTNRFRVQLSICISPILTTSVVEP 536
+ C LQ F I + +RL+++Y + +++ +I +P ++T+VVEP
Sbjct: 125 LTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTAVVEP 184
Query: 537 YNAMLTIHSSMDHTDIAILTDNEAIYTICKETLDISRPTYANINRIIAQNFSDMTASIRF 716
YN++LT H++++H+D A + DNEAIY IC+ LDI RPTY N+NR+I+Q S +TAS+RF
Sbjct: 185 YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRF 244
Query: 717 ESSLSSDMDQLITNLIPYPRIHFPVMSHAPNISICRAEHQQLSTPEIT 860
+ +L+ D+ + TNL+PYPRIHFP++++AP +S +A H+QLS EIT
Sbjct: 245 DGALNVDLTEFQTNLVPYPRIHFPLVTYAPIVSAEKAYHEQLSVAEIT 292
>sp|P14641|TBA2_MAIZE Tubulin alpha-2 chain (Alpha-2 tubulin)
Length = 451
Score = 313 bits (802), Expect = 4e-85
Identities = 151/287 (52%), Positives = 209/287 (72%), Gaps = 2/287 (0%)
Frame = +3
Query: 6 INVGQSGVQLANASWELFCIEHGIQANGQLK--ETLQDDDSTAFTTFFHEVPNGQYVPRV 179
I++GQ+G+Q+ NA WEL+C+EHGIQA+GQ+ +T+ D AF TFF E G++VPR
Sbjct: 7 IHIGQAGIQVGNACWELYCLEHGIQADGQMPGDKTIGGGDD-AFNTFFSETGAGKHVPRA 65
Query: 180 VSVDLEPTVLDEVRTGAYRNLFHPDQLISGSEDAANNFARGHFTIGKTMIDRIMLLVRKS 359
V VDLEPTV+DEVRTG YR LFHP+QLISG EDAANNFARGH+TIGK ++D + +RK
Sbjct: 66 VFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKL 125
Query: 360 VECCDYLQNFFILNXXXXXXXXXXXXXXXDRLAIEYTNRFRVQLSICISPILTTSVVEPY 539
+ C LQ F + N +RL+++Y + ++ ++ SP ++TSVVEPY
Sbjct: 126 ADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPY 185
Query: 540 NAMLTIHSSMDHTDIAILTDNEAIYTICKETLDISRPTYANINRIIAQNFSDMTASIRFE 719
N++L+ HS ++HTD+AIL DNEAIY IC+ +LDI RPTY N+NR+++Q S +TAS+RF+
Sbjct: 186 NSVLSTHSLLEHTDVAILLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFD 245
Query: 720 SSLSSDMDQLITNLIPYPRIHFPVMSHAPNISICRAEHQQLSTPEIT 860
+L+ D+++ TNL+PYPRIHF + S+AP IS +A H+QLS EIT
Sbjct: 246 GALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEIT 292
>sp|P14640|TBA1_MAIZE Tubulin alpha-1 chain (Alpha-1 tubulin)
Length = 451
Score = 313 bits (802), Expect = 4e-85
Identities = 151/287 (52%), Positives = 209/287 (72%), Gaps = 2/287 (0%)
Frame = +3
Query: 6 INVGQSGVQLANASWELFCIEHGIQANGQLK--ETLQDDDSTAFTTFFHEVPNGQYVPRV 179
I++GQ+G+Q+ NA WEL+C+EHGIQA+GQ+ +T+ D AF TFF E G++VPR
Sbjct: 7 IHIGQAGIQVGNACWELYCLEHGIQADGQMPGDKTIGGGDD-AFNTFFSETGAGKHVPRA 65
Query: 180 VSVDLEPTVLDEVRTGAYRNLFHPDQLISGSEDAANNFARGHFTIGKTMIDRIMLLVRKS 359
V VDLEPTV+DEVRTG YR LFHP+QLISG EDAANNFARGH+TIGK ++D + +RK
Sbjct: 66 VFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKL 125
Query: 360 VECCDYLQNFFILNXXXXXXXXXXXXXXXDRLAIEYTNRFRVQLSICISPILTTSVVEPY 539
+ C LQ F + N +RL+++Y + ++ ++ SP ++TSVVEPY
Sbjct: 126 ADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPY 185
Query: 540 NAMLTIHSSMDHTDIAILTDNEAIYTICKETLDISRPTYANINRIIAQNFSDMTASIRFE 719
N++L+ HS ++HTD+AIL DNEAIY IC+ +LDI RPTY N+NR+++Q S +TAS+RF+
Sbjct: 186 NSVLSTHSLLEHTDVAILLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFD 245
Query: 720 SSLSSDMDQLITNLIPYPRIHFPVMSHAPNISICRAEHQQLSTPEIT 860
+L+ D+++ TNL+PYPRIHF + S+AP IS +A H+QLS EIT
Sbjct: 246 GALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEIT 292
>sp|O22347|TBA1_ELEIN Tubulin alpha-1 chain (Alpha-1 tubulin)
Length = 451
Score = 313 bits (801), Expect = 5e-85
Identities = 150/287 (52%), Positives = 209/287 (72%), Gaps = 2/287 (0%)
Frame = +3
Query: 6 INVGQSGVQLANASWELFCIEHGIQANGQLK--ETLQDDDSTAFTTFFHEVPNGQYVPRV 179
I++GQ+G+Q+ NA WEL+C+EHGIQA+GQ+ +T+ D AF TFF E G++VPR
Sbjct: 7 IHIGQAGIQVGNACWELYCLEHGIQADGQMPGDKTIGGGDD-AFNTFFSETGAGKHVPRA 65
Query: 180 VSVDLEPTVLDEVRTGAYRNLFHPDQLISGSEDAANNFARGHFTIGKTMIDRIMLLVRKS 359
V VDLEPTV+DEVRTG YR LFHP+QLISG EDAANNFARGH+TIGK ++D + +RK
Sbjct: 66 VFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKL 125
Query: 360 VECCDYLQNFFILNXXXXXXXXXXXXXXXDRLAIEYTNRFRVQLSICISPILTTSVVEPY 539
+ C LQ F + N +RL+++Y + ++ ++ SP ++TSVVEPY
Sbjct: 126 ADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPY 185
Query: 540 NAMLTIHSSMDHTDIAILTDNEAIYTICKETLDISRPTYANINRIIAQNFSDMTASIRFE 719
N++L+ HS ++HTD+A+L DNEAIY IC+ +LDI RPTY N+NR+++Q S +TAS+RF+
Sbjct: 186 NSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFD 245
Query: 720 SSLSSDMDQLITNLIPYPRIHFPVMSHAPNISICRAEHQQLSTPEIT 860
+L+ D+++ TNL+PYPRIHF + S+AP IS +A H+QLS EIT
Sbjct: 246 GALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEIT 292
>sp|Q9FT36|TBA_DAUCA Tubulin alpha chain
Length = 451
Score = 311 bits (798), Expect = 1e-84
Identities = 148/287 (51%), Positives = 207/287 (72%), Gaps = 2/287 (0%)
Frame = +3
Query: 6 INVGQSGVQLANASWELFCIEHGIQANGQLK--ETLQDDDSTAFTTFFHEVPNGQYVPRV 179
+++GQ+G+Q+ NA WEL+C+EHGIQ NGQ+ +T+ D AF TFF E G++VPR
Sbjct: 7 VHIGQAGIQIGNACWELYCLEHGIQPNGQMPSDKTVGGGDD-AFNTFFSETGAGKHVPRA 65
Query: 180 VSVDLEPTVLDEVRTGAYRNLFHPDQLISGSEDAANNFARGHFTIGKTMIDRIMLLVRKS 359
+ VDLEPTV+DEVRTG YR LFHP+QLISG EDAANNFARGH+TIGK ++D + +RK
Sbjct: 66 IFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKL 125
Query: 360 VECCDYLQNFFILNXXXXXXXXXXXXXXXDRLAIEYTNRFRVQLSICISPILTTSVVEPY 539
+ C LQ F + N +RL+++Y + ++ ++ SP ++TSVVEPY
Sbjct: 126 ADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQISTSVVEPY 185
Query: 540 NAMLTIHSSMDHTDIAILTDNEAIYTICKETLDISRPTYANINRIIAQNFSDMTASIRFE 719
N++L+ HS ++HTD+++L DNEAIY ICK +LDI RPTY N+NR+++Q S +TAS+RF+
Sbjct: 186 NSVLSTHSLLEHTDVSVLLDNEAIYDICKRSLDIERPTYTNLNRLVSQVISSLTASLRFD 245
Query: 720 SSLSSDMDQLITNLIPYPRIHFPVMSHAPNISICRAEHQQLSTPEIT 860
+L+ D+ + TNL+PYPRIHF + S+AP IS +A H+QLS EIT
Sbjct: 246 GALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEIT 292
>sp|P46259|TBA1_PEA Tubulin alpha-1 chain
Length = 452
Score = 311 bits (797), Expect = 1e-84
Identities = 150/287 (52%), Positives = 208/287 (72%), Gaps = 2/287 (0%)
Frame = +3
Query: 6 INVGQSGVQLANASWELFCIEHGIQANGQLK--ETLQDDDSTAFTTFFHEVPNGQYVPRV 179
I++GQ+G+Q+ NA WEL+C+EHGIQ +GQ+ +T+ D AF TFF E G++VPR
Sbjct: 7 IHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDD-AFNTFFSETGAGKHVPRA 65
Query: 180 VSVDLEPTVLDEVRTGAYRNLFHPDQLISGSEDAANNFARGHFTIGKTMIDRIMLLVRKS 359
V VDLEPTV+DEVRTGAYR LFHP+QLISG EDAANNFARGH+TIGK ++D + +RK
Sbjct: 66 VFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKL 125
Query: 360 VECCDYLQNFFILNXXXXXXXXXXXXXXXDRLAIEYTNRFRVQLSICISPILTTSVVEPY 539
+ C LQ F + N +RL+++Y + ++ ++ SP ++TSVVEPY
Sbjct: 126 ADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPY 185
Query: 540 NAMLTIHSSMDHTDIAILTDNEAIYTICKETLDISRPTYANINRIIAQNFSDMTASIRFE 719
N++L+ HS ++HTD+A+L DNEAIY IC+ +LDI RPTY N+NR+++Q S +TAS+RF+
Sbjct: 186 NSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFD 245
Query: 720 SSLSSDMDQLITNLIPYPRIHFPVMSHAPNISICRAEHQQLSTPEIT 860
+L+ D+ + TNL+PYPRIHF + S+AP IS +A H+QLS EIT
Sbjct: 246 GALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEIT 292
>sp|Q6VAF9|TBA4_GOSHI Tubulin alpha-4 chain (Alpha-4 tubulin)
Length = 450
Score = 311 bits (797), Expect = 1e-84
Identities = 150/287 (52%), Positives = 208/287 (72%), Gaps = 2/287 (0%)
Frame = +3
Query: 6 INVGQSGVQLANASWELFCIEHGIQANGQLK--ETLQDDDSTAFTTFFHEVPNGQYVPRV 179
I++GQ+G+Q+ NA WEL+C+EHGIQ +GQ+ +T+ D AF TFF E G++VPR
Sbjct: 7 IHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDD-AFNTFFSETGAGKHVPRA 65
Query: 180 VSVDLEPTVLDEVRTGAYRNLFHPDQLISGSEDAANNFARGHFTIGKTMIDRIMLLVRKS 359
V VDLEPTV+DEVRTGAYR LFHP+QLISG EDAANNFARGH+TIGK ++D + +RK
Sbjct: 66 VFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKL 125
Query: 360 VECCDYLQNFFILNXXXXXXXXXXXXXXXDRLAIEYTNRFRVQLSICISPILTTSVVEPY 539
+ C LQ F + N +RL+++Y + ++ ++ SP ++TSVVEPY
Sbjct: 126 ADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPY 185
Query: 540 NAMLTIHSSMDHTDIAILTDNEAIYTICKETLDISRPTYANINRIIAQNFSDMTASIRFE 719
N++L+ HS ++HTD+A+L DNEAIY IC+ +LDI RPTY N+NR+++Q S +TAS+RF+
Sbjct: 186 NSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFD 245
Query: 720 SSLSSDMDQLITNLIPYPRIHFPVMSHAPNISICRAEHQQLSTPEIT 860
+L+ D+ + TNL+PYPRIHF + S+AP IS +A H+QLS EIT
Sbjct: 246 GALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEIT 292
>sp|Q6VAG0|TBA2_GOSHI Tubulin alpha-2 chain (Alpha-2 tubulin)
Length = 450
Score = 311 bits (797), Expect = 1e-84
Identities = 150/287 (52%), Positives = 208/287 (72%), Gaps = 2/287 (0%)
Frame = +3
Query: 6 INVGQSGVQLANASWELFCIEHGIQANGQLK--ETLQDDDSTAFTTFFHEVPNGQYVPRV 179
I++GQ+G+Q+ NA WEL+C+EHGIQ +GQ+ +T+ D AF TFF E G++VPR
Sbjct: 7 IHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDD-AFNTFFSETGAGKHVPRA 65
Query: 180 VSVDLEPTVLDEVRTGAYRNLFHPDQLISGSEDAANNFARGHFTIGKTMIDRIMLLVRKS 359
V VDLEPTV+DEVRTGAYR LFHP+QLISG EDAANNFARGH+TIGK ++D + +RK
Sbjct: 66 VFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKL 125
Query: 360 VECCDYLQNFFILNXXXXXXXXXXXXXXXDRLAIEYTNRFRVQLSICISPILTTSVVEPY 539
+ C LQ F + N +RL+++Y + ++ ++ SP ++TSVVEPY
Sbjct: 126 ADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPY 185
Query: 540 NAMLTIHSSMDHTDIAILTDNEAIYTICKETLDISRPTYANINRIIAQNFSDMTASIRFE 719
N++L+ HS ++HTD+A+L DNEAIY IC+ +LDI RPTY N+NR+++Q S +TAS+RF+
Sbjct: 186 NSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFD 245
Query: 720 SSLSSDMDQLITNLIPYPRIHFPVMSHAPNISICRAEHQQLSTPEIT 860
+L+ D+ + TNL+PYPRIHF + S+AP IS +A H+QLS EIT
Sbjct: 246 GALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEIT 292
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,422,382
Number of Sequences: 369166
Number of extensions: 1821281
Number of successful extensions: 5332
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4898
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8582957970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)