Planaria EST Database


DrC_02928

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02928
         (853 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6X6Z7|TEKT3_MOUSE  Tektin-3                                   130   5e-30
sp|Q9BXF9|TEKT3_HUMAN  Tektin-3                                   129   8e-30
sp|Q99JD2|TEKT1_RAT  Tektin-1                                     111   2e-24
sp|Q969V4|TEKT1_HUMAN  Tektin-1                                   110   6e-24
sp|Q9DAJ2|TEKT1_MOUSE  Tektin-1                                   108   2e-23
sp|Q26648|TKB1_STRPU  Tektin-B1                                   102   2e-21
sp|Q6AYM2|TEKT2_RAT  Tektin-2 (Testicular tektin) (Tektin-t)       87   6e-17
sp|Q9UIF3|TEKT2_HUMAN  Tektin-2 (Testicular tektin) (Tektin-...    87   8e-17
sp|Q922G7|TEKT2_MOUSE  Tektin-2 (Testicular tektin) (Tektin-t)     85   2e-16
sp|Q8IWJ2|GCC2_HUMAN  GRIP and coiled-coil domain-containing...    44   6e-04
>sp|Q6X6Z7|TEKT3_MOUSE Tektin-3
          Length = 490

 Score =  130 bits (327), Expect = 5e-30
 Identities = 69/167 (41%), Positives = 100/167 (59%)
 Frame = +2

Query: 353 KENLEMDWSNKLEAEEYDEKSKQLNNSSTNKQFYNGVARYQELQSTPESWAQHTHDNIVR 532
           +  LE D S+K  A   D+K + L N+S    ++ GV R     S PE+WA+ T DN++R
Sbjct: 251 QHELEKDLSDKQAALRIDDKCQHLRNTSEGVSYFRGVERVDATVSVPETWAKFTDDNVLR 310

Query: 533 AEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYIDQRNKIKENLKKTCK 712
           ++ ER AS +L     NL+   A ++  Q +  +++F  R+ + +D +NKI  +L KT +
Sbjct: 311 SQSERAASAKLREETENLLIVTANEMWNQFNKVNLAFTNRIAETVDAKNKIHTHLTKTLQ 370

Query: 713 EIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRDTPQ 853
           EI   E  I+ +KKAI+EK  FLKV QTRL  RT RP V+LCRD  Q
Sbjct: 371 EIFQIEMTIESIKKAIKEKSAFLKVAQTRLDERTRRPNVELCRDMAQ 417
>sp|Q9BXF9|TEKT3_HUMAN Tektin-3
          Length = 490

 Score =  129 bits (325), Expect = 8e-30
 Identities = 70/167 (41%), Positives = 99/167 (59%)
 Frame = +2

Query: 353 KENLEMDWSNKLEAEEYDEKSKQLNNSSTNKQFYNGVARYQELQSTPESWAQHTHDNIVR 532
           +  LE D S+K  A   D+K   L N+S    ++ GV R     S PESWA+ T DNI+R
Sbjct: 251 QHELEKDLSDKQTAYRIDDKCHHLRNTSDGVGYFRGVERVDATVSVPESWAKFTDDNILR 310

Query: 533 AEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYIDQRNKIKENLKKTCK 712
           ++ ER AS +L     NL+   A ++  Q +  ++SF  R+ +  D +NKI+ +L KT +
Sbjct: 311 SQSERAASAKLRDDIENLLVVTANEMWNQFNKVNLSFTNRIAETADAKNKIQTHLAKTLQ 370

Query: 713 EIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRDTPQ 853
           EI   E  I+ +KKAI++K  FLKV QTRL  RT RP ++LCRD  Q
Sbjct: 371 EIFQTEMTIESIKKAIKDKTAFLKVAQTRLDERTRRPNIELCRDMAQ 417
>sp|Q99JD2|TEKT1_RAT Tektin-1
          Length = 418

 Score =  111 bits (278), Expect = 2e-24
 Identities = 62/167 (37%), Positives = 92/167 (55%)
 Frame = +2

Query: 353 KENLEMDWSNKLEAEEYDEKSKQLNNSSTNKQFYNGVARYQELQSTPESWAQHTHDNIVR 532
           K NLE D  +K  A   D+    LNN+S + ++   V R +    + E W   ++ N+ +
Sbjct: 168 KYNLEKDLKDKFTAITIDDICFSLNNNSPDIKYSENVVRIEPNSVSLEDWLDFSNTNMQK 227

Query: 533 AEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYIDQRNKIKENLKKTCK 712
           A+ +   S  L TL   ++   A D+R Q +  D +F   + +  D RNK+ ++L K   
Sbjct: 228 ADKQLNNSMALKTLVDQILSQTANDLRRQCEVVDTAFVNGLKETKDARNKLADHLAKVMD 287

Query: 713 EIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRDTPQ 853
           EIA QEKNI+ L+ AI ++E   KV  TRL NRT+RP V+LCRD  Q
Sbjct: 288 EIASQEKNIEVLENAITQQEGPAKVAHTRLENRTYRPNVELCRDVAQ 334
>sp|Q969V4|TEKT1_HUMAN Tektin-1
          Length = 418

 Score =  110 bits (274), Expect = 6e-24
 Identities = 62/167 (37%), Positives = 89/167 (53%)
 Frame = +2

Query: 353 KENLEMDWSNKLEAEEYDEKSKQLNNSSTNKQFYNGVARYQELQSTPESWAQHTHDNIVR 532
           K NLE D  +K  A   D+    LNN+S N ++     R +    + E W   +  N+ +
Sbjct: 168 KYNLEKDLKDKFVALTIDDICFSLNNNSPNIRYSENAVRIEPNSVSLEDWLDFSSTNVEK 227

Query: 533 AEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYIDQRNKIKENLKKTCK 712
           A+ +R  S  L  L   ++   A D+R Q D  D +F+  +    D R+K+ ++L K  +
Sbjct: 228 ADKQRNNSLMLKALVDRILSQTANDLRKQCDVVDTAFKNGLKDTKDARDKLADHLAKVME 287

Query: 713 EIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRDTPQ 853
           EIA QEKNI  L+KAI ++E   KV  TRL  RT RP V+LCRD  Q
Sbjct: 288 EIASQEKNITALEKAILDQEGPAKVAHTRLETRTHRPNVELCRDVAQ 334
>sp|Q9DAJ2|TEKT1_MOUSE Tektin-1
          Length = 418

 Score =  108 bits (269), Expect = 2e-23
 Identities = 63/167 (37%), Positives = 89/167 (53%)
 Frame = +2

Query: 353 KENLEMDWSNKLEAEEYDEKSKQLNNSSTNKQFYNGVARYQELQSTPESWAQHTHDNIVR 532
           K NLE D  +K  A   D+    LNN+S N  F   V R +    + E W   ++ N+ +
Sbjct: 168 KYNLEKDLRDKFTAITIDDVCFSLNNNSPNINFSEKVVRIEPNSVSLEDWLDFSNANVEK 227

Query: 533 AEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYIDQRNKIKENLKKTCK 712
           A+ +   S  L TL   ++   A D+R Q +  D +F   + +  D RNK+ ++L K  +
Sbjct: 228 ADKQLNNSTALKTLVDQILSQTANDLRRQCEVVDEAFINGLKETKDARNKLADHLAKVME 287

Query: 713 EIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRDTPQ 853
           EIA QEKNI  L+ AI ++E   KV  TRL  RT RP V+LCRD  Q
Sbjct: 288 EIASQEKNIMALENAITQQEGPAKVAHTRLETRTHRPNVELCRDIAQ 334

 Score = 38.5 bits (88), Expect = 0.024
 Identities = 25/118 (21%), Positives = 51/118 (43%)
 Frame = +2

Query: 491 PESWAQHTHDNIVRAEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYID 670
           PE W         RAE +R  SE+L+     LV +     R      +   ++R+++   
Sbjct: 13  PEEWYIANKSQYHRAEAQRSQSERLVAESQRLVEEIEKTTRKSQSDVNKKLEQRLEEVRF 72

Query: 671 QRNKIKENLKKTCKEIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRD 844
            + ++ + L++   +  D       L++++   ++ L + +  L  R  R G+DL  D
Sbjct: 73  WKKELDDKLEQLVNQTDDLLTYKTRLERSLESYKEPLHITEKCLEYREKRVGIDLVHD 130
>sp|Q26648|TKB1_STRPU Tektin-B1
          Length = 400

 Score =  102 bits (253), Expect = 2e-21
 Identities = 57/169 (33%), Positives = 95/169 (56%)
 Frame = +2

Query: 347 EVKENLEMDWSNKLEAEEYDEKSKQLNNSSTNKQFYNGVARYQELQSTPESWAQHTHDNI 526
           E ++ L  D  +K EA++ D     L  SS +  +     R  +  +TP++W   +  N 
Sbjct: 140 EARQQLHADLRDKTEAKKIDTYCHDLTISSPDICYQPNSTRTPKGSTTPQTWEDFSRYNK 199

Query: 527 VRAEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYIDQRNKIKENLKKT 706
            RA+ E  +S++L     + V     D+  Q  AT+ + +KR+ +    +++ +   K T
Sbjct: 200 DRADAEMRSSQRLREAIHSTVAQTDNDLEAQRQATEFALRKRIHEMKRAKDEDEWQKKNT 259

Query: 707 CKEIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRDTPQ 853
            +EIA QE+NI +L++AI++KE+ LK+  TRL NRT+RP V+LCRD  Q
Sbjct: 260 EEEIAKQERNIRELEQAIKDKENPLKLAMTRLENRTYRPNVELCRDNAQ 308
>sp|Q6AYM2|TEKT2_RAT Tektin-2 (Testicular tektin) (Tektin-t)
          Length = 430

 Score = 87.0 bits (214), Expect = 6e-17
 Identities = 53/169 (31%), Positives = 87/169 (51%)
 Frame = +2

Query: 347 EVKENLEMDWSNKLEAEEYDEKSKQLNNSSTNKQFYNGVARYQELQSTPESWAQHTHDNI 526
           E+++ L  D  +K+E  E D     LN ++ N        R  +  +T + W   T  N 
Sbjct: 167 EIRQQLNSDHRDKMETLEIDRGCLSLNLTAPNLSLKVNPTRVPKDSTTLQEWDDFTRFNK 226

Query: 527 VRAEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYIDQRNKIKENLKKT 706
            RA+ E  AS +L    A  +     ++  Q  AT+ +F+KR+ +     +++K   K T
Sbjct: 227 NRADTEMKASIELRETIALAIAQTNNELEAQRVATEFTFRKRLREMESLYSELKWQEKNT 286

Query: 707 CKEIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRDTPQ 853
            +EIA+ + +I  L++ +R K   LK+  TRL +RT+RP V+LCRD  Q
Sbjct: 287 LEEIAELQADIRRLEEDLRRKMMNLKLAHTRLESRTYRPNVELCRDQTQ 335
>sp|Q9UIF3|TEKT2_HUMAN Tektin-2 (Testicular tektin) (Tektin-t) (Testicular tektin B1-like
           protein) (Tektin-B1) (TEKTB1)
          Length = 430

 Score = 86.7 bits (213), Expect = 8e-17
 Identities = 54/169 (31%), Positives = 87/169 (51%)
 Frame = +2

Query: 347 EVKENLEMDWSNKLEAEEYDEKSKQLNNSSTNKQFYNGVARYQELQSTPESWAQHTHDNI 526
           EV++ L  D   K+E  E D     LN  S N        R  +  +T + W   +  N 
Sbjct: 167 EVQQQLNSDHRGKMETLEIDRGCLSLNLRSPNISLKVDPTRVPDGSTTLQQWDDFSRFNK 226

Query: 527 VRAEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYIDQRNKIKENLKKT 706
            RAE E  A+ +L    A  + +   ++  Q  AT+ +F+KR+ +     +++K   K T
Sbjct: 227 DRAEAEMKAATELREATALTIAETNNELEAQRVATEFAFRKRLREMEKVYSELKWQEKNT 286

Query: 707 CKEIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRDTPQ 853
            +EIA+ +++I  L++ +R K   LK++ TRL  RT+RP V+LCRD  Q
Sbjct: 287 LEEIAELQEDIRHLEEDLRTKLLSLKLSHTRLEARTYRPNVELCRDQAQ 335
>sp|Q922G7|TEKT2_MOUSE Tektin-2 (Testicular tektin) (Tektin-t)
          Length = 430

 Score = 85.1 bits (209), Expect = 2e-16
 Identities = 54/169 (31%), Positives = 87/169 (51%)
 Frame = +2

Query: 347 EVKENLEMDWSNKLEAEEYDEKSKQLNNSSTNKQFYNGVARYQELQSTPESWAQHTHDNI 526
           E+++ L  D  +K+E  E D     LN +S N        R  +  +T + W + T  N 
Sbjct: 167 EIRQQLNSDHRDKMETLEIDRGCLSLNLTSPNISLKVNPTRIPKDSTTLQQWDEFTRFNK 226

Query: 527 VRAEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYIDQRNKIKENLKKT 706
            RAE E  AS +L    A  +     ++  Q  AT+ +F+KR+ +     +++K   K T
Sbjct: 227 NRAEAEMKASIELREAIALAIAQTNNELDAQRVATEFTFRKRLREMESFYSELKWQEKNT 286

Query: 707 CKEIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRDTPQ 853
            +EIA+ + +I  L++ +R K   LK+  TRL +RT+R  V+LCRD  Q
Sbjct: 287 LEEIAELQGDIRRLEEDLRRKMMNLKLAHTRLESRTYRSNVELCRDQTQ 335
>sp|Q8IWJ2|GCC2_HUMAN GRIP and coiled-coil domain-containing protein 2 (Golgi coiled coil
            protein GCC185) (CTCL tumor antigen se1-1)
            (CLL-associated antigen KW-11)
          Length = 1583

 Score = 43.9 bits (102), Expect = 6e-04
 Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
 Frame = +2

Query: 473  QELQSTPESWAQHTHDNIVRAEHERMASE--QLLTLCANLVHDAATDIRTQADATDI--- 637
            QEL+   +   Q T  N+  A++ER+  E  Q LT   N + D   +I+ Q    +    
Sbjct: 1042 QELELVKKDAQQTTLMNMEIADYERLMKELNQKLTNKNNKIEDLEQEIKIQKQKQETLQE 1101

Query: 638  ---SFQKRVDQYIDQRNKIKENLKKTCKEIADQEK 733
               S Q  V QY ++  KIK+ L KT KE+AD ++
Sbjct: 1102 EITSLQSSVQQYEEKNTKIKQLLVKTKKELADSKQ 1136

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
 Frame = +2

Query: 476 ELQSTPESWAQHTHDNIVRAEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRV 655
           +LQ+  E+ +QH   NI          E+LL L A +  +   ++  Q +A+     K  
Sbjct: 117 QLQNIIEANSQHYQKNI------NSLQEELLQLKA-IHQEEVKELMCQIEAS----AKEH 165

Query: 656 DQYIDQRNKIKENLKKTCKEIADQEKNI--------DDLKKAIREKEDFLKVNQTRLHNR 811
           +  I++ N++KENL K C+     EKNI        ++L+KA        ++    L   
Sbjct: 166 EAEINKLNELKENLVKQCEA---SEKNIQKKYECELENLRKATSNANQDNQICSILLQEN 222

Query: 812 TF 817
           TF
Sbjct: 223 TF 224
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,027,338
Number of Sequences: 369166
Number of extensions: 1462288
Number of successful extensions: 5134
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5117
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8390082510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)