Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_02928
(853 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q6X6Z7|TEKT3_MOUSE Tektin-3 130 5e-30
sp|Q9BXF9|TEKT3_HUMAN Tektin-3 129 8e-30
sp|Q99JD2|TEKT1_RAT Tektin-1 111 2e-24
sp|Q969V4|TEKT1_HUMAN Tektin-1 110 6e-24
sp|Q9DAJ2|TEKT1_MOUSE Tektin-1 108 2e-23
sp|Q26648|TKB1_STRPU Tektin-B1 102 2e-21
sp|Q6AYM2|TEKT2_RAT Tektin-2 (Testicular tektin) (Tektin-t) 87 6e-17
sp|Q9UIF3|TEKT2_HUMAN Tektin-2 (Testicular tektin) (Tektin-... 87 8e-17
sp|Q922G7|TEKT2_MOUSE Tektin-2 (Testicular tektin) (Tektin-t) 85 2e-16
sp|Q8IWJ2|GCC2_HUMAN GRIP and coiled-coil domain-containing... 44 6e-04
>sp|Q6X6Z7|TEKT3_MOUSE Tektin-3
Length = 490
Score = 130 bits (327), Expect = 5e-30
Identities = 69/167 (41%), Positives = 100/167 (59%)
Frame = +2
Query: 353 KENLEMDWSNKLEAEEYDEKSKQLNNSSTNKQFYNGVARYQELQSTPESWAQHTHDNIVR 532
+ LE D S+K A D+K + L N+S ++ GV R S PE+WA+ T DN++R
Sbjct: 251 QHELEKDLSDKQAALRIDDKCQHLRNTSEGVSYFRGVERVDATVSVPETWAKFTDDNVLR 310
Query: 533 AEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYIDQRNKIKENLKKTCK 712
++ ER AS +L NL+ A ++ Q + +++F R+ + +D +NKI +L KT +
Sbjct: 311 SQSERAASAKLREETENLLIVTANEMWNQFNKVNLAFTNRIAETVDAKNKIHTHLTKTLQ 370
Query: 713 EIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRDTPQ 853
EI E I+ +KKAI+EK FLKV QTRL RT RP V+LCRD Q
Sbjct: 371 EIFQIEMTIESIKKAIKEKSAFLKVAQTRLDERTRRPNVELCRDMAQ 417
>sp|Q9BXF9|TEKT3_HUMAN Tektin-3
Length = 490
Score = 129 bits (325), Expect = 8e-30
Identities = 70/167 (41%), Positives = 99/167 (59%)
Frame = +2
Query: 353 KENLEMDWSNKLEAEEYDEKSKQLNNSSTNKQFYNGVARYQELQSTPESWAQHTHDNIVR 532
+ LE D S+K A D+K L N+S ++ GV R S PESWA+ T DNI+R
Sbjct: 251 QHELEKDLSDKQTAYRIDDKCHHLRNTSDGVGYFRGVERVDATVSVPESWAKFTDDNILR 310
Query: 533 AEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYIDQRNKIKENLKKTCK 712
++ ER AS +L NL+ A ++ Q + ++SF R+ + D +NKI+ +L KT +
Sbjct: 311 SQSERAASAKLRDDIENLLVVTANEMWNQFNKVNLSFTNRIAETADAKNKIQTHLAKTLQ 370
Query: 713 EIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRDTPQ 853
EI E I+ +KKAI++K FLKV QTRL RT RP ++LCRD Q
Sbjct: 371 EIFQTEMTIESIKKAIKDKTAFLKVAQTRLDERTRRPNIELCRDMAQ 417
>sp|Q99JD2|TEKT1_RAT Tektin-1
Length = 418
Score = 111 bits (278), Expect = 2e-24
Identities = 62/167 (37%), Positives = 92/167 (55%)
Frame = +2
Query: 353 KENLEMDWSNKLEAEEYDEKSKQLNNSSTNKQFYNGVARYQELQSTPESWAQHTHDNIVR 532
K NLE D +K A D+ LNN+S + ++ V R + + E W ++ N+ +
Sbjct: 168 KYNLEKDLKDKFTAITIDDICFSLNNNSPDIKYSENVVRIEPNSVSLEDWLDFSNTNMQK 227
Query: 533 AEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYIDQRNKIKENLKKTCK 712
A+ + S L TL ++ A D+R Q + D +F + + D RNK+ ++L K
Sbjct: 228 ADKQLNNSMALKTLVDQILSQTANDLRRQCEVVDTAFVNGLKETKDARNKLADHLAKVMD 287
Query: 713 EIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRDTPQ 853
EIA QEKNI+ L+ AI ++E KV TRL NRT+RP V+LCRD Q
Sbjct: 288 EIASQEKNIEVLENAITQQEGPAKVAHTRLENRTYRPNVELCRDVAQ 334
>sp|Q969V4|TEKT1_HUMAN Tektin-1
Length = 418
Score = 110 bits (274), Expect = 6e-24
Identities = 62/167 (37%), Positives = 89/167 (53%)
Frame = +2
Query: 353 KENLEMDWSNKLEAEEYDEKSKQLNNSSTNKQFYNGVARYQELQSTPESWAQHTHDNIVR 532
K NLE D +K A D+ LNN+S N ++ R + + E W + N+ +
Sbjct: 168 KYNLEKDLKDKFVALTIDDICFSLNNNSPNIRYSENAVRIEPNSVSLEDWLDFSSTNVEK 227
Query: 533 AEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYIDQRNKIKENLKKTCK 712
A+ +R S L L ++ A D+R Q D D +F+ + D R+K+ ++L K +
Sbjct: 228 ADKQRNNSLMLKALVDRILSQTANDLRKQCDVVDTAFKNGLKDTKDARDKLADHLAKVME 287
Query: 713 EIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRDTPQ 853
EIA QEKNI L+KAI ++E KV TRL RT RP V+LCRD Q
Sbjct: 288 EIASQEKNITALEKAILDQEGPAKVAHTRLETRTHRPNVELCRDVAQ 334
>sp|Q9DAJ2|TEKT1_MOUSE Tektin-1
Length = 418
Score = 108 bits (269), Expect = 2e-23
Identities = 63/167 (37%), Positives = 89/167 (53%)
Frame = +2
Query: 353 KENLEMDWSNKLEAEEYDEKSKQLNNSSTNKQFYNGVARYQELQSTPESWAQHTHDNIVR 532
K NLE D +K A D+ LNN+S N F V R + + E W ++ N+ +
Sbjct: 168 KYNLEKDLRDKFTAITIDDVCFSLNNNSPNINFSEKVVRIEPNSVSLEDWLDFSNANVEK 227
Query: 533 AEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYIDQRNKIKENLKKTCK 712
A+ + S L TL ++ A D+R Q + D +F + + D RNK+ ++L K +
Sbjct: 228 ADKQLNNSTALKTLVDQILSQTANDLRRQCEVVDEAFINGLKETKDARNKLADHLAKVME 287
Query: 713 EIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRDTPQ 853
EIA QEKNI L+ AI ++E KV TRL RT RP V+LCRD Q
Sbjct: 288 EIASQEKNIMALENAITQQEGPAKVAHTRLETRTHRPNVELCRDIAQ 334
Score = 38.5 bits (88), Expect = 0.024
Identities = 25/118 (21%), Positives = 51/118 (43%)
Frame = +2
Query: 491 PESWAQHTHDNIVRAEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYID 670
PE W RAE +R SE+L+ LV + R + ++R+++
Sbjct: 13 PEEWYIANKSQYHRAEAQRSQSERLVAESQRLVEEIEKTTRKSQSDVNKKLEQRLEEVRF 72
Query: 671 QRNKIKENLKKTCKEIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRD 844
+ ++ + L++ + D L++++ ++ L + + L R R G+DL D
Sbjct: 73 WKKELDDKLEQLVNQTDDLLTYKTRLERSLESYKEPLHITEKCLEYREKRVGIDLVHD 130
>sp|Q26648|TKB1_STRPU Tektin-B1
Length = 400
Score = 102 bits (253), Expect = 2e-21
Identities = 57/169 (33%), Positives = 95/169 (56%)
Frame = +2
Query: 347 EVKENLEMDWSNKLEAEEYDEKSKQLNNSSTNKQFYNGVARYQELQSTPESWAQHTHDNI 526
E ++ L D +K EA++ D L SS + + R + +TP++W + N
Sbjct: 140 EARQQLHADLRDKTEAKKIDTYCHDLTISSPDICYQPNSTRTPKGSTTPQTWEDFSRYNK 199
Query: 527 VRAEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYIDQRNKIKENLKKT 706
RA+ E +S++L + V D+ Q AT+ + +KR+ + +++ + K T
Sbjct: 200 DRADAEMRSSQRLREAIHSTVAQTDNDLEAQRQATEFALRKRIHEMKRAKDEDEWQKKNT 259
Query: 707 CKEIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRDTPQ 853
+EIA QE+NI +L++AI++KE+ LK+ TRL NRT+RP V+LCRD Q
Sbjct: 260 EEEIAKQERNIRELEQAIKDKENPLKLAMTRLENRTYRPNVELCRDNAQ 308
>sp|Q6AYM2|TEKT2_RAT Tektin-2 (Testicular tektin) (Tektin-t)
Length = 430
Score = 87.0 bits (214), Expect = 6e-17
Identities = 53/169 (31%), Positives = 87/169 (51%)
Frame = +2
Query: 347 EVKENLEMDWSNKLEAEEYDEKSKQLNNSSTNKQFYNGVARYQELQSTPESWAQHTHDNI 526
E+++ L D +K+E E D LN ++ N R + +T + W T N
Sbjct: 167 EIRQQLNSDHRDKMETLEIDRGCLSLNLTAPNLSLKVNPTRVPKDSTTLQEWDDFTRFNK 226
Query: 527 VRAEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYIDQRNKIKENLKKT 706
RA+ E AS +L A + ++ Q AT+ +F+KR+ + +++K K T
Sbjct: 227 NRADTEMKASIELRETIALAIAQTNNELEAQRVATEFTFRKRLREMESLYSELKWQEKNT 286
Query: 707 CKEIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRDTPQ 853
+EIA+ + +I L++ +R K LK+ TRL +RT+RP V+LCRD Q
Sbjct: 287 LEEIAELQADIRRLEEDLRRKMMNLKLAHTRLESRTYRPNVELCRDQTQ 335
>sp|Q9UIF3|TEKT2_HUMAN Tektin-2 (Testicular tektin) (Tektin-t) (Testicular tektin B1-like
protein) (Tektin-B1) (TEKTB1)
Length = 430
Score = 86.7 bits (213), Expect = 8e-17
Identities = 54/169 (31%), Positives = 87/169 (51%)
Frame = +2
Query: 347 EVKENLEMDWSNKLEAEEYDEKSKQLNNSSTNKQFYNGVARYQELQSTPESWAQHTHDNI 526
EV++ L D K+E E D LN S N R + +T + W + N
Sbjct: 167 EVQQQLNSDHRGKMETLEIDRGCLSLNLRSPNISLKVDPTRVPDGSTTLQQWDDFSRFNK 226
Query: 527 VRAEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYIDQRNKIKENLKKT 706
RAE E A+ +L A + + ++ Q AT+ +F+KR+ + +++K K T
Sbjct: 227 DRAEAEMKAATELREATALTIAETNNELEAQRVATEFAFRKRLREMEKVYSELKWQEKNT 286
Query: 707 CKEIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRDTPQ 853
+EIA+ +++I L++ +R K LK++ TRL RT+RP V+LCRD Q
Sbjct: 287 LEEIAELQEDIRHLEEDLRTKLLSLKLSHTRLEARTYRPNVELCRDQAQ 335
>sp|Q922G7|TEKT2_MOUSE Tektin-2 (Testicular tektin) (Tektin-t)
Length = 430
Score = 85.1 bits (209), Expect = 2e-16
Identities = 54/169 (31%), Positives = 87/169 (51%)
Frame = +2
Query: 347 EVKENLEMDWSNKLEAEEYDEKSKQLNNSSTNKQFYNGVARYQELQSTPESWAQHTHDNI 526
E+++ L D +K+E E D LN +S N R + +T + W + T N
Sbjct: 167 EIRQQLNSDHRDKMETLEIDRGCLSLNLTSPNISLKVNPTRIPKDSTTLQQWDEFTRFNK 226
Query: 527 VRAEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRVDQYIDQRNKIKENLKKT 706
RAE E AS +L A + ++ Q AT+ +F+KR+ + +++K K T
Sbjct: 227 NRAEAEMKASIELREAIALAIAQTNNELDAQRVATEFTFRKRLREMESFYSELKWQEKNT 286
Query: 707 CKEIADQEKNIDDLKKAIREKEDFLKVNQTRLHNRTFRPGVDLCRDTPQ 853
+EIA+ + +I L++ +R K LK+ TRL +RT+R V+LCRD Q
Sbjct: 287 LEEIAELQGDIRRLEEDLRRKMMNLKLAHTRLESRTYRSNVELCRDQTQ 335
>sp|Q8IWJ2|GCC2_HUMAN GRIP and coiled-coil domain-containing protein 2 (Golgi coiled coil
protein GCC185) (CTCL tumor antigen se1-1)
(CLL-associated antigen KW-11)
Length = 1583
Score = 43.9 bits (102), Expect = 6e-04
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Frame = +2
Query: 473 QELQSTPESWAQHTHDNIVRAEHERMASE--QLLTLCANLVHDAATDIRTQADATDI--- 637
QEL+ + Q T N+ A++ER+ E Q LT N + D +I+ Q +
Sbjct: 1042 QELELVKKDAQQTTLMNMEIADYERLMKELNQKLTNKNNKIEDLEQEIKIQKQKQETLQE 1101
Query: 638 ---SFQKRVDQYIDQRNKIKENLKKTCKEIADQEK 733
S Q V QY ++ KIK+ L KT KE+AD ++
Sbjct: 1102 EITSLQSSVQQYEEKNTKIKQLLVKTKKELADSKQ 1136
Score = 31.2 bits (69), Expect = 3.8
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Frame = +2
Query: 476 ELQSTPESWAQHTHDNIVRAEHERMASEQLLTLCANLVHDAATDIRTQADATDISFQKRV 655
+LQ+ E+ +QH NI E+LL L A + + ++ Q +A+ K
Sbjct: 117 QLQNIIEANSQHYQKNI------NSLQEELLQLKA-IHQEEVKELMCQIEAS----AKEH 165
Query: 656 DQYIDQRNKIKENLKKTCKEIADQEKNI--------DDLKKAIREKEDFLKVNQTRLHNR 811
+ I++ N++KENL K C+ EKNI ++L+KA ++ L
Sbjct: 166 EAEINKLNELKENLVKQCEA---SEKNIQKKYECELENLRKATSNANQDNQICSILLQEN 222
Query: 812 TF 817
TF
Sbjct: 223 TF 224
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,027,338
Number of Sequences: 369166
Number of extensions: 1462288
Number of successful extensions: 5134
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5117
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8390082510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)