Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_02836
(863 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q6IV78|TAZ_SAISC Tafazzin >gi|62287559|sp|Q6IV76|TAZ_ERY... 138 2e-32
sp|Q6IV77|TAZ_MACMU Tafazzin 138 2e-32
sp|Q6IV83|TAZ_GORGO Tafazzin 134 3e-31
sp|Q6IV84|TAZ_PANTR Tafazzin 134 3e-31
sp|Q6IV82|TAZ_PONPY Tafazzin 134 3e-31
sp|Q16635|TAZ_HUMAN Tafazzin 132 1e-30
sp|Q9V6G5|TAZ_DROME Tafazzin homolog 131 3e-30
sp|Q06510|TAZ1_YEAST Taffazin homolog 84 5e-16
sp|Q8YRV2|CRCB_ANASP Protein crcB homolog 30 8.7
>sp|Q6IV78|TAZ_SAISC Tafazzin
sp|Q6IV76|TAZ_ERYPA Tafazzin
Length = 262
Score = 138 bits (347), Expect = 2e-32
Identities = 73/180 (40%), Positives = 102/180 (56%)
Frame = +3
Query: 228 NRNKNTPMITVMNHASVCDDTFVYGSILPCSILSDGNKMRWTLTAADICFNSIKTSKFFM 407
NR TP+ITV NH S DD ++G IL + + MRWT AADICF S FF
Sbjct: 56 NRGPATPLITVSNHQSCMDDPHLWG-ILKLRHIWNLKLMRWTPAAADICFTKELHSHFFS 114
Query: 408 SGQCIPVWRNVYCRETGDLLVPGGGVMQPSMNYALEILNSGGWINLYPQGKIVYGFETMK 587
G+C+PV R G GV Q M++ LE LN G W++++P+GK+ M
Sbjct: 115 LGKCVPVCR-------------GDGVYQKGMDFILEKLNHGDWVHIFPEGKV-----NMS 156
Query: 588 EETFQLRWGIGRLVSECKQKPIIVPIWHCGLDQICPVVTPYWYTTFISQFFGKKVTIMIG 767
E + +WGIGRL++EC PII+P+WH G++ + P PY+ FG+K+T++IG
Sbjct: 157 SEFLRFKWGIGRLIAECHLNPIILPLWHVGMNDVLPNSPPYF------PRFGQKITVLIG 210
>sp|Q6IV77|TAZ_MACMU Tafazzin
Length = 262
Score = 138 bits (347), Expect = 2e-32
Identities = 73/180 (40%), Positives = 102/180 (56%)
Frame = +3
Query: 228 NRNKNTPMITVMNHASVCDDTFVYGSILPCSILSDGNKMRWTLTAADICFNSIKTSKFFM 407
NR TP+ITV NH S DD ++G IL + + MRWT AADICF S FF
Sbjct: 56 NRGPATPLITVSNHQSCMDDPHLWG-ILKLRHIWNLKLMRWTPAAADICFTKELHSHFFS 114
Query: 408 SGQCIPVWRNVYCRETGDLLVPGGGVMQPSMNYALEILNSGGWINLYPQGKIVYGFETMK 587
G+C+PV R G GV Q M++ LE LN G W++++P+GK+ M
Sbjct: 115 LGKCVPVCR-------------GDGVYQKGMDFILEKLNHGDWVHIFPEGKV-----NMS 156
Query: 588 EETFQLRWGIGRLVSECKQKPIIVPIWHCGLDQICPVVTPYWYTTFISQFFGKKVTIMIG 767
E + +WGIGRL++EC PII+P+WH G++ + P PY+ FG+K+T++IG
Sbjct: 157 SEFLRFKWGIGRLIAECHLNPIILPLWHVGMNDVLPNSPPYF------PRFGQKITVLIG 210
>sp|Q6IV83|TAZ_GORGO Tafazzin
Length = 292
Score = 134 bits (338), Expect = 3e-31
Identities = 74/197 (37%), Positives = 104/197 (52%), Gaps = 17/197 (8%)
Frame = +3
Query: 228 NRNKNTPMITVMNHASVCDDTFVYGSILPCSILSDGNKMRWTLTAADICFNSIKTSKFFM 407
NR TP+ITV NH S DD ++G IL + + MRWT AADICF S FF
Sbjct: 56 NRGPATPLITVSNHQSCMDDPHLWG-ILKLRHIWNLKLMRWTPAAADICFTKELHSHFFS 114
Query: 408 SGQCIPVWRNV-----------------YCRETGDLLVPGGGVMQPSMNYALEILNSGGW 536
G+C+PV R + G G GV Q M++ LE LN G W
Sbjct: 115 LGKCVPVCRGAEFFQAENEGKGVLDTGRHMPGAGKRREKGDGVYQKGMDFILEKLNHGDW 174
Query: 537 INLYPQGKIVYGFETMKEETFQLRWGIGRLVSECKQKPIIVPIWHCGLDQICPVVTPYWY 716
++++P+GK+ M E + +WGIGRL++EC PII+P+WH G++ + P PY+
Sbjct: 175 VHIFPEGKV-----NMSSEFLRFKWGIGRLIAECHLNPIILPLWHVGMNDVLPNSPPYF- 228
Query: 717 TTFISQFFGKKVTIMIG 767
FG+K+T++IG
Sbjct: 229 -----PRFGQKITVLIG 240
>sp|Q6IV84|TAZ_PANTR Tafazzin
Length = 292
Score = 134 bits (338), Expect = 3e-31
Identities = 74/197 (37%), Positives = 104/197 (52%), Gaps = 17/197 (8%)
Frame = +3
Query: 228 NRNKNTPMITVMNHASVCDDTFVYGSILPCSILSDGNKMRWTLTAADICFNSIKTSKFFM 407
NR TP+ITV NH S DD ++G IL + + MRWT AADICF S FF
Sbjct: 56 NRGPATPLITVSNHQSCMDDPHLWG-ILKLRHIWNLKLMRWTPAAADICFTKELHSHFFS 114
Query: 408 SGQCIPVWRNV-----------------YCRETGDLLVPGGGVMQPSMNYALEILNSGGW 536
G+C+PV R + G G GV Q M++ LE LN G W
Sbjct: 115 LGKCVPVCRGAEFFQAENEGKGVLDTGRHMPGAGKRREKGDGVYQKGMDFILEKLNHGDW 174
Query: 537 INLYPQGKIVYGFETMKEETFQLRWGIGRLVSECKQKPIIVPIWHCGLDQICPVVTPYWY 716
++++P+GK+ M E + +WGIGRL++EC PII+P+WH G++ + P PY+
Sbjct: 175 VHIFPEGKV-----NMSSEFLRFKWGIGRLIAECHLNPIILPLWHVGMNDVLPNSPPYF- 228
Query: 717 TTFISQFFGKKVTIMIG 767
FG+K+T++IG
Sbjct: 229 -----PRFGQKITVLIG 240
>sp|Q6IV82|TAZ_PONPY Tafazzin
Length = 292
Score = 134 bits (338), Expect = 3e-31
Identities = 74/197 (37%), Positives = 104/197 (52%), Gaps = 17/197 (8%)
Frame = +3
Query: 228 NRNKNTPMITVMNHASVCDDTFVYGSILPCSILSDGNKMRWTLTAADICFNSIKTSKFFM 407
NR TP+ITV NH S DD ++G IL + + MRWT AADICF S FF
Sbjct: 56 NRGPATPLITVSNHQSCMDDPHLWG-ILKLRHIWNLKLMRWTPAAADICFTKELHSHFFS 114
Query: 408 SGQCIPVWRNV-----------------YCRETGDLLVPGGGVMQPSMNYALEILNSGGW 536
G+C+PV R + G G GV Q M++ LE LN G W
Sbjct: 115 LGKCVPVCRGAEFFQPENEGKGVLDTGRHMPGAGKRREKGDGVYQKGMDFILEKLNHGDW 174
Query: 537 INLYPQGKIVYGFETMKEETFQLRWGIGRLVSECKQKPIIVPIWHCGLDQICPVVTPYWY 716
++++P+GK+ M E + +WGIGRL++EC PII+P+WH G++ + P PY+
Sbjct: 175 VHIFPEGKV-----NMSSEFLRFKWGIGRLIAECHLNPIILPLWHVGMNDVLPNSPPYF- 228
Query: 717 TTFISQFFGKKVTIMIG 767
FG+K+T++IG
Sbjct: 229 -----PRFGQKITVLIG 240
>sp|Q16635|TAZ_HUMAN Tafazzin
Length = 292
Score = 132 bits (332), Expect = 1e-30
Identities = 73/196 (37%), Positives = 103/196 (52%), Gaps = 17/196 (8%)
Frame = +3
Query: 231 RNKNTPMITVMNHASVCDDTFVYGSILPCSILSDGNKMRWTLTAADICFNSIKTSKFFMS 410
R TP+ITV NH S DD ++G IL + + MRWT AADICF S FF
Sbjct: 57 RGPATPLITVSNHQSCMDDPHLWG-ILKLRHIWNLKLMRWTPAAADICFTKELHSHFFSL 115
Query: 411 GQCIPVWRNV-----------------YCRETGDLLVPGGGVMQPSMNYALEILNSGGWI 539
G+C+PV R + G G GV Q M++ LE LN G W+
Sbjct: 116 GKCVPVCRGAEFFQAENEGKGVLDTGRHMPGAGKRREKGDGVYQKGMDFILEKLNHGDWV 175
Query: 540 NLYPQGKIVYGFETMKEETFQLRWGIGRLVSECKQKPIIVPIWHCGLDQICPVVTPYWYT 719
+++P+GK+ M E + +WGIGRL++EC PII+P+WH G++ + P PY+
Sbjct: 176 HIFPEGKV-----NMSSEFLRFKWGIGRLIAECHLNPIILPLWHVGMNDVLPNSPPYF-- 228
Query: 720 TFISQFFGKKVTIMIG 767
FG+K+T++IG
Sbjct: 229 ----PRFGQKITVLIG 240
>sp|Q9V6G5|TAZ_DROME Tafazzin homolog
Length = 378
Score = 131 bits (329), Expect = 3e-30
Identities = 81/235 (34%), Positives = 122/235 (51%), Gaps = 4/235 (1%)
Frame = +3
Query: 111 PSKFLRRVS---MGTVGSFFKL-MSXXXXXXXXXXXXXXXYVLNRNKNTPMITVMNHASV 278
PSKF VS + VG F K+ + + R K P++TV NH S
Sbjct: 132 PSKFWYVVSQFVVSAVGIFSKVVLMFLNKPRVYNRERLIQLITKRPKGIPLVTVSNHYSC 191
Query: 279 CDDTFVYGSILPCSILSDGNKMRWTLTAADICFNSIKTSKFFMSGQCIPVWRNVYCRETG 458
DD ++G LP I+ + K+RW++ A DICF + S FFM G+CIPV R +
Sbjct: 192 FDDPGLWGC-LPLGIVCNTYKIRWSMAAHDICFTNKLHSLFFMFGKCIPVVRGI------ 244
Query: 459 DLLVPGGGVMQPSMNYALEILNSGGWINLYPQGKIVYGFETMKEETFQLRWGIGRLVSEC 638
GV Q ++N +E G WI+++P+GK+ M +E +L+WG+GR++ E
Sbjct: 245 -------GVYQDAINLCIEKAALGHWIHVFPEGKV-----NMDKEELRLKWGVGRIIYES 292
Query: 639 KQKPIIVPIWHCGLDQICPVVTPYWYTTFISQFFGKKVTIMIGDDIQLPDKLYEL 803
+ PII+P+WH G+D + P V PY GK+VT+ +G + L D + +L
Sbjct: 293 PKIPIILPMWHEGMDDLLPNVEPYVIQR------GKQVTLNVGQPLDLNDFILDL 341
>sp|Q06510|TAZ1_YEAST Taffazin homolog
Length = 381
Score = 84.0 bits (206), Expect = 5e-16
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 19/202 (9%)
Frame = +3
Query: 228 NRNKNTPMITVMNHASVCDDTFVYGSILPCSILSDGNKMRWTLTAADICFNSIKTSKFFM 407
++ +N ++TVMNH S+ DD V+ + LP + + + +RW+L A +ICF + + FF
Sbjct: 64 SKRENRGLMTVMNHMSMVDDPLVWAT-LPYKLFTSLDNIRWSLGAHNICFQNKFLANFFS 122
Query: 408 SGQCIPVWR----------NVYCR-----ETGDLLVPGGGVMQPSMNYALE---ILNSGG 533
GQ + R + R +T DL + S+ A I +
Sbjct: 123 LGQVLSTERFGVGPFQGSIDASIRLLSPDDTLDLEWTPHSEVSSSLKKAYSPPIIRSKPS 182
Query: 534 WINLYPQGKIVYGFETMKEETFQLRWGIGRLVSECKQKPIIVPIWHCGLDQIC-PVVTPY 710
W+++YP+G ++ + + +WGI R++ E + PI+VPI+ G ++I VT
Sbjct: 183 WVHVYPEGFVLQLYPPFENSMRYFKWGITRMILEATKPPIVVPIFATGFEKIASEAVTDS 242
Query: 711 WYTTFISQFFGKKVTIMIGDDI 776
+ + + FG ++ + IGD +
Sbjct: 243 MFRQILPRNFGSEINVTIGDPL 264
>sp|Q8YRV2|CRCB_ANASP Protein crcB homolog
Length = 157
Score = 30.0 bits (66), Expect = 8.7
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 567 YGFETMKEETFQLRWGIGRLVSECKQKPIIVPIWHCGLDQICPVVTPYWYTTFISQFFG 743
+GF+ + E++ QL RLV E Q+P I L I ++ Y+ + + +Q FG
Sbjct: 3 FGFKILVEQSIQLLTVAPRLVPEVLQQPTIRHPIAVSLGAIAGALSRYYLSLWFAQRFG 61
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,084,537
Number of Sequences: 369166
Number of extensions: 2243338
Number of successful extensions: 4917
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4889
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8582957970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)